دورية أكاديمية

A year of COVID-19 GWAS results from the GRASP portal reveals potential genetic risk factors

التفاصيل البيبلوغرافية
العنوان: A year of COVID-19 GWAS results from the GRASP portal reveals potential genetic risk factors
المؤلفون: Florian Thibord, Melissa V. Chan, Ming-Huei Chen, Andrew D. Johnson
المصدر: HGG Advances, Vol 3, Iss 2, Pp 100095- (2022)
بيانات النشر: Elsevier, 2022.
سنة النشر: 2022
المجموعة: LCC:Genetics
مصطلحات موضوعية: COVID-19, genetics, GWAS, trajectory, MUC4, Genetics, QH426-470
الوصف: Host genetic variants influence the susceptibility and severity of several infectious diseases, and the discovery of genetic associations with coronavirus disease 2019 (COVID-19) phenotypes could help to develop new therapeutic strategies to decrease its burden.Between May 2020 and June 2021, we used COVID-19 data released periodically by UK Biobank and performed 65 genome-wide association studies in up to 18 releases of COVID-19 susceptibility (n = 18,481 cases in June 2021), hospitalization (n = 3,260), severe outcomes (n = 1,244), and deaths (n = 1,104), stratified by sex and ancestry.In coherence with previous studies, we observed two independent signals at the chr3p21.31 locus (rs73062389-A, odds ratio [OR], 1.21 (P = 4.26 × 10−15) and rs71325088-C, OR, 1.62 [P = 2.25 × 10−9]) modulating susceptibility and severity, respectively, and a signal influencing susceptibility at the ABO locus (rs9411378-A; OR, 1.10; P = 3.30 × 10−12), suggesting an increased risk of infection in non-O blood groups carriers. Additional signals at the APOE (associated with severity and death) LRMDA (susceptibility in non-European) and chr2q32.3 (susceptibility in women) loci were also identified, but did not replicate in independent datasets. We then devised an approach to extract variants suggestively associated (P < 10−5), exhibiting an increase in significance over time. When applied to the susceptibility, hospitalization and severity analyses, this approach revealed the known RPL24, DPP9, and MAPT loci, respectively, among hundreds of other signals.These results, freely available on the GRASP portal, provide insights on the genetic mechanisms involved in COVID-19 phenotypes.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2666-2477
العلاقة: http://www.sciencedirect.com/science/article/pii/S2666247722000112Test; https://doaj.org/toc/2666-2477Test
DOI: 10.1016/j.xhgg.2022.100095
الوصول الحر: https://doaj.org/article/df37faaae8334c61896427c62257ac05Test
رقم الانضمام: edsdoj.f37faaae8334c61896427c62257ac05
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:26662477
DOI:10.1016/j.xhgg.2022.100095