مورد إلكتروني
broadinstitute/gatk-sv: v0.28.5-beta ...
| العنوان: | broadinstitute/gatk-sv: v0.28.5-beta ... |
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| المؤلفون: | Vahid, epiercehoffman, Mark Walker, gatk-sv-bot, cwhelan, Ted Brookings, kirtanav98, tedsharpe, Ryan L. Collins, Shadi Zaheri, Henrique Ribeiro, Snow, Matt Welland, Michael Franklin, Nick Watts, Peter Diakumis, Stephanie Hao |
| بيانات النشر: | Zenodo |
| سنة النشر: | 2024 |
| المجموعة: | DataCite Metadata Store (German National Library of Science and Technology) |
| الوصف: | Updates GatherSampleEvidence Copy or move the files instead of creating symlinks in the LocalizeReads task for compatibility with CoA/TES Make LocalizeReads optional Make manta region bed index required Make MELT scripts independent of the execution path Main pipeline Rewrite SplitVariants in TasksGenotypeBatch.wdl Disable MakeCohortVcfMetrics by default Find CN field for mCNVs in MainVcfQc without hard-coding order of format fields Update BEDTools version to 2.31.0 Two small bugfixes to EvidenceQc Update gatk_docker with CPX annotation changes to SVAnnotate Reduce redundant docker image inputs: sv_pipeline_base_docker, sv_pipeline_hail_docker, sv_pipeline_updates_docker, sv_pipeline_rdtest_docker all now just sv_pipeline_docker Downstream filtering Reduce SVConcordance memory usage Release AoU filtering model Make the ploidy table a workflow output instead of an intermediate Change Vapor bed preprocessing errors to warnings Genotype filtering training labels and cutoff optimization Misc. Add ReshardVcf ... |
| نوع الوثيقة: | software article in journal/newspaper |
| اللغة: | unknown |
| العلاقة: | https://github.com/broadinstitute/gatk-sv/tree/v0.28.5-betaTest; https://dx.doi.org/10.5281/zenodo.8226160Test; https://dx.doi.org/10.5281/zenodo.7908940Test; https://dx.doi.org/10.5281/zenodo.8092086Test; https://dx.doi.org/10.5281/zenodo.8270777Test; https://dx.doi.org/10.5281/zenodo.8087528Test; https://dx.doi.org/10.5281/zenodo.11106503Test; https://dx.doi.org/10.5281/zenodo.10035274Test |
| DOI: | 10.5281/zenodo.7908939 |
| الإتاحة: | https://doi.org/10.5281/zenodo.790893910.5281/zenodo.822616010.5281/zenodo.790894010.5281/zenodo.809208610.5281/zenodo.827077710.5281/zenodo.808752810.5281/zenodo.1110650310.5281/zenodo.10035274Test |
| حقوق: | Creative Commons Attribution 4.0 International ; https://creativecommons.org/licenses/by/4.0/legalcodeTest ; cc-by-4.0 |
| رقم الانضمام: | edsbas.A5A365F8 |
| قاعدة البيانات: | BASE |
| DOI: | 10.5281/zenodo.7908939 |
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