دورية أكاديمية
Temporal patterns in Ixodes ricinus microbial communities: an insight into tick-borne microbe interactions
| العنوان: | Temporal patterns in Ixodes ricinus microbial communities: an insight into tick-borne microbe interactions |
|---|---|
| المؤلفون: | Lejal, E., Chiquet, J., Aubert, J., Robin, S., Estrada-Peña, A., Rue, O., Midoux, C., Mariadassou, M., Bailly, Xavier, Cougoul, A., Gasqui, Patrick, Cosson, J., Chalvet-Monfray, Karine, Vayssier Taussat, Muriel, Pollet, Thomas |
| المساهمون: | Biologie moléculaire et immunologie parasitaires et fongiques (BIPAR), École nationale vétérinaire d'Alfort (ENVA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Normandie, Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Mathématiques et Informatique Appliquées (MIA Paris-Saclay), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Faculty of Veterinary Medicine, University of Zaragoza - Universidad de Zaragoza Zaragoza, Mathématiques et Informatique Appliquées du Génome à l'Environnement Jouy-En-Josas (MaIAGE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Université Paris-Saclay, Procédés biotechnologiques au service de l'environnement (UR PROSE), Unité Mixte de Recherche d'Épidémiologie des maladies Animales et zoonotiques (UMR EPIA), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Santé Animale (DEPT SA), Animal, Santé, Territoires, Risques et Ecosystèmes (UMR ASTRE), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), INRAE, Métaprogramme Méta-omiques et Ecosystèmes Microbiens (MEM), Adaptation of Agriculture and Forests to Climate Change (AAFCC), Région Ile-de-France, ANR-17-CE32-0011,NGB,Biosurveillance Next-Gen des changements dans la structure et le fonctionnement des écosystèmes(2017) |
| المصدر: | EISSN: 2049-2618 ; Microbiome ; https://hal.inrae.fr/hal-03287263Test ; Microbiome, 2021, 9 (1), pp.153. ⟨10.1186/s40168-021-01051-8⟩ |
| بيانات النشر: | HAL CCSD BioMed Central |
| سنة النشر: | 2021 |
| مصطلحات موضوعية: | Borrelia, Ticks, Microbial Interactions, Rickettsia, MESH: Borrelia, MESH: Ixodes, MESH: Microbial Interactions, MESH: Rickettsia, [SDV]Life Sciences [q-bio] |
| الوصف: | This work was supported by the métaprogramme “Metaomics and microbial ecosystems” (MEM) and the métaprogramme “Adaptation of Agriculture and Forests to Climate Change” (ACCAF) granted by the French National Institute for Agricultural Research (France). The salary of Emilie Lejal, the PhD student working on this project was funded by the Ile-de-France region. Julie Aubert, Julien Chiquet and Stéphane Robin were partially supported by the French ANR grant ANR-17-CE32-0011 Next Generation Biomonitoring (NGB). ; International audience ; Background Ticks transmit pathogens of medical and veterinary importance and are an increasing threat to human and animal health. Assessing disease risk and developing new control strategies requires identifying members of the tick-borne microbiota as well as their temporal dynamics and interactions. Methods Using high-throughput sequencing, we studied the Ixodes ricinus microbiota and its temporal dynamics. 371 nymphs were monthly collected during three consecutive years in a peri-urban forest. After a Poisson lognormal model was adjusted to our data set, a principal component analysis, sparse network reconstruction, and differential analysis allowed us to assess seasonal and monthly variability of I. ricinus microbiota and interactions within this community. Results Around 75% of the detected sequences belonged to five genera known to be maternally inherited bacteria in arthropods and to potentially circulate in ticks: Candidatus Midichloria, Rickettsia , Spiroplasma , Arsenophonus and Wolbachia . The structure of the I. ricinus microbiota varied over time with interannual recurrence and seemed to be mainly driven by OTUs commonly found in the environment. Total network analysis revealed a majority of positive partial correlations. We identified strong relationships between OTUs belonging to Wolbachia and Arsenophonus , evidence for the presence of the parasitoid wasp Ixodiphagus hookeri in ticks. Other associations were observed between the tick symbiont Candidatus Midichloria and ... |
| نوع الوثيقة: | article in journal/newspaper |
| اللغة: | English |
| العلاقة: | info:eu-repo/semantics/altIdentifier/pmid/34217365; hal-03287263; https://hal.inrae.fr/hal-03287263Test; https://hal.inrae.fr/hal-03287263/documentTest; https://hal.inrae.fr/hal-03287263/file/s40168-021-01051-8.pdfTest; PUBMED: 34217365; PUBMEDCENTRAL: PMC8254910; WOS: 000669312200001 |
| DOI: | 10.1186/s40168-021-01051-8 |
| الإتاحة: | https://doi.org/10.1186/s40168-021-01051-8Test https://hal.inrae.fr/hal-03287263Test https://hal.inrae.fr/hal-03287263/documentTest https://hal.inrae.fr/hal-03287263/file/s40168-021-01051-8.pdfTest |
| حقوق: | http://creativecommons.org/licenses/byTest/ ; info:eu-repo/semantics/OpenAccess |
| رقم الانضمام: | edsbas.3E8A9B4 |
| قاعدة البيانات: | BASE |
| DOI: | 10.1186/s40168-021-01051-8 |
|---|