المؤلفون: Lam, Michael Tun Yin, Duttke, Sascha H, Odish, Mazen F, Le, Hiep D, Hansen, Emily A, Nguyen, Celina T, Trescott, Samantha, Kim, Roy, Deota, Shaunak, Chang, Max W, Patel, Arjun, Hepokoski, Mark, Alotaibi, Mona, Rolfsen, Mark, Perofsky, Katherine, Warden, Anna S, Foley, Jennifer, Ramirez, Sydney I, Dan, Jennifer M, Abbott, Robert K, Crotty, Shane, Alexander, Laura E Crotty, Malhotra, Atul, Panda, Satchidananda, Benner, Christopher W, Coufal, Nicole G

المصدر: Cell Reports Medicine. 4(2)

مصطلحات موضوعية: Biomedical and Clinical Sciences, Genetics, Lung, Human Genome, Infectious Diseases, Aetiology, 2.1 Biological and endogenous factors, Good Health and Well Being, Humans, Transcription Factors, COVID-19, Gene Expression Regulation, Leukocytes, Intensive Care Units, active cistrome, acute respiratory distress syndrome, biomarkers, critical care, disease stratification, endotyping, enhancer RNA, transcription factor activity, transcriptional regulation, Biomedical and clinical sciences

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/21f8j14xTest

المؤلفون: Kunyu Li, Leiming You, Jianhua Zhen, Guangrui Huang, Ting Wang, Yanan Cai, Yunan Zhang, Anlong Xu

المصدر: Journal of Traditional Chinese Medical Sciences, Vol 11, Iss 1, Pp 3-20 (2024)

مصطلحات موضوعية: Subthreshold depression, Leukocyte, mRNA biomarker, CTRA, Transcription factor activity, CMap, Miscellaneous systems and treatments, RZ409.7-999

وصف الملف: electronic resource

العلاقة: http://www.sciencedirect.com/science/article/pii/S2095754823000753Test; https://doaj.org/toc/2095-7548Test

الوصول الحر: https://doaj.org/article/c107ab3690d241969f90ec26fc1ce4aeTest

المؤلفون: Li, Xiaoting, Lappalainen, Tuuli, Bussemaker, Harmen J.

المصدر: Cell Genomics. 3(9)

مصطلحات موضوعية: aQTL, beta-binomial distribution, gene regulation, generalized linear model, genetic variation, genome-wide association, quantitative trait locus, RNA-seq data, trans-acting genetic variation, transcription factor activity, transcription factor perturbation signatures

وصف الملف: print

الوصول الحر: https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-337788Test
https://doi.org/10.1016/j.xgen.2023.100382Test

المؤلفون: Hu, Kai, Liu, Haibo, Lawson, Nathan D, Zhu, Lihua Julie

المساهمون: Molecular, Cell and Cancer Biology, Program in Molecular Medicine

المصدر: Frontiers in cell and developmental biology ; 10 ; 981859 ; Switzerland

مصطلحات موضوعية: chromatin accessibility, integration of scATAC-seq and scRNA-seq, nextflow, pipeline, scATAC-seq, single cell, trajectory inference, transcription factor activity and footprinting analysis

العلاقة: Frontiers in Cell and Developmental Biology; https://doi.org/10.3389/fcell.2022.981859Test; Hu K, Liu H, Lawson ND, Zhu LJ. scATACpipe: A nextflow pipeline for comprehensive and reproducible analyses of single cell ATAC-seq data. Front Cell Dev Biol. 2022 Sep 27;10:981859. doi:10.3389/fcell.2022.981859. PMID: 36238687; PMCID: PMC9551270.; http://hdl.handle.net/20.500.14038/52102Test

الإتاحة: https://doi.org/10.3389/fcell.2022.981859Test
https://doi.org/20.500.14038/52102Test
https://hdl.handle.net/20.500.14038/52102Test

المؤلفون: Kai Hu, Haibo Liu, Nathan D. Lawson, Lihua Julie Zhu

المصدر: Frontiers in Cell and Developmental Biology, Vol 10 (2022)

مصطلحات موضوعية: scATAC-seq, chromatin accessibility, single cell, nextflow, pipeline, transcription factor activity and footprinting analysis, Biology (General), QH301-705.5

وصف الملف: electronic resource

العلاقة: https://www.frontiersin.org/articles/10.3389/fcell.2022.981859/fullTest; https://doaj.org/toc/2296-634XTest

الوصول الحر: https://doaj.org/article/45261f3e9e1742d789686eee14e95c97Test

المؤلفون: López Domínguez, Raúl, Carmona Sáez, Pedro

مصطلحات موضوعية: Transcription factor activity inference, Cluster analysis, Systemic lupus erythematosus, Disease classification

العلاقة: Lopez-Dominguez, R.; Toro-Dominguez, D.; Martorell-Marugan, J.; Garcia-Moreno, A.; Holland, C.H.; Saez-Rodriguez, J.; Goldman, D.; Petri, M.A.; Alarcon-Riquelme, M.E.; Carmona-Saez, P. Transcription Factor Activity Inference in Systemic Lupus Erythematosus. Life 2021, 11, 299. https://doi.org/10.3390Test/ life11040299; http://hdl.handle.net/10481/68730Test

الإتاحة: https://doi.org/10.3390/life11040299Test
http://hdl.handle.net/10481/68730Test

المؤلفون: Christopher J. Genito (11020961), Meital Eckshtain-Levi (1465066), Zayda L. Piedra-Quintero (6192284), Sai Archana Krovi (3662776), Abriana Kroboth (11020964), Rebeca T. Stiepel (9293011), Mireia Guerau-de-Arellano (839746), Eric M. Bachelder (1309827), Kristy M. Ainslie (1309836)

مصطلحات موضوعية: Biochemistry, Medicine, Microbiology, Genetics, Physiology, Pharmacology, Biotechnology, Immunology, Developmental Biology, Cancer, Hematology, Space Science, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, fumaric acid esters, donor monocyte-derived macrophages, combination, Macrophages Macrophage-mediated inf., pyrin domain-containing protein 3, NOD, LRR, NF -κB transcription factor activity, factor κ B, Multiple anti-inflammatory agents, anti-inflammatory agents, MMF, conjugate, NF -κB, NLRP, DXM

العلاقة: https://figshare.com/articles/journal_contribution/Dexamethasone_and_Fumaric_Acid_Ester_Conjugate_Synergistically_Inhibits_Inflammation_and_NF-_B_in_Macrophages/14839370Test

الإتاحة: https://doi.org/10.1021/acs.bioconjchem.1c00200.s001Test

المؤلفون: Adrian J. Luna (10024591), Rosa T. Sterk (10024594), Anastacia M. Griego-Fisher (10024597), Joon-Yong Chung (573772), Kiersten L. Berggren (10024600), Virginie Bondu (5050838), Pamela Barraza-Flores (8700915), Andrew T. Cowan (10024603), Gregory N. Gan (10024606), Emrullah Yilmaz (10024609), Hanbyoul Cho (573770), Jae-Hoon Kim (442860), Stephen M. Hewitt (190750), Julie E. Bauman (5063948), Michelle A. Ozbun (10024612)

مصطلحات موضوعية: Biochemistry, Medicine, Cell Biology, Genetics, Molecular Biology, Biotechnology, Developmental Biology, Cancer, Mental Health, Hematology, Infectious Diseases, Virology, papillomavirus oncogene expression, HPV oncogene expression, hr-HPV oncogene expression, neoplastic phenotype, hr-HPV oncogene transcription, transcription factor activity, epithelial contact inhibition, HPV-induced tumors Intracellular pa., stratifying epithelial tissues, EGFR, Mechanistic studies show, MEK, neoplastic tissue biopsy materials, tissue differentiation cues, ERK, epithelial organotypic tissue models, AP, replicative cycles

العلاقة: https://figshare.com/articles/journal_contribution/p-ERK1_2_and_p16INK4_expression_sup_a_sup_in_human_cervical_intraepithelial_neoplasia_related_to_Fig_1_/13631734Test

الإتاحة: https://doi.org/10.1371/journal.ppat.1009216.s004Test

المؤلفون: Adrian J. Luna (10024591), Rosa T. Sterk (10024594), Anastacia M. Griego-Fisher (10024597), Joon-Yong Chung (573772), Kiersten L. Berggren (10024600), Virginie Bondu (5050838), Pamela Barraza-Flores (8700915), Andrew T. Cowan (10024603), Gregory N. Gan (10024606), Emrullah Yilmaz (10024609), Hanbyoul Cho (573770), Jae-Hoon Kim (442860), Stephen M. Hewitt (190750), Julie E. Bauman (5063948), Michelle A. Ozbun (10024612)

مصطلحات موضوعية: Biochemistry, Medicine, Cell Biology, Genetics, Molecular Biology, Biotechnology, Developmental Biology, Cancer, Mental Health, Hematology, Infectious Diseases, Virology, papillomavirus oncogene expression, HPV oncogene expression, hr-HPV oncogene expression, neoplastic phenotype, hr-HPV oncogene transcription, transcription factor activity, epithelial contact inhibition, HPV-induced tumors Intracellular pa., stratifying epithelial tissues, EGFR, Mechanistic studies show, MEK, neoplastic tissue biopsy materials, tissue differentiation cues, ERK, epithelial organotypic tissue models, AP, replicative cycles

العلاقة: https://figshare.com/articles/journal_contribution/Primers_used_in_analysis_of_HPV_transcription_and_genome_copies_/13631737Test

الإتاحة: https://doi.org/10.1371/journal.ppat.1009216.s005Test

المؤلفون: Raul Lopez-Dominguez, Daniel Toro-Dominguez, Jordi Martorell-Marugan, Adrian Garcia-Moreno, Christian Holland, Julio Saez-Rodriguez, Daniel Goldman, Michelle Petri, Marta Alarcon-Riquelme, Pedro Carmona-Saez

المصدر: Life; Volume 11; Issue 4; Pages: 299

مصطلحات موضوعية: transcription factor activity inference, clustering analysis, systemic lupus erythematosus, disease classification

جغرافية الموضوع: agris

وصف الملف: application/pdf

العلاقة: Genetics and Genomics; https://dx.doi.org/10.3390/life11040299Test

الإتاحة: https://doi.org/10.3390/life11040299Test