المؤلفون: Shams, Hengameh, Hollenbach, Jill A, Matsunaga, Atsuko, Mofrad, Mohammad RK, Oksenberg, Jorge R, Didonna, Alessandro

مصطلحات موضوعية: Humans, Peptides, Protein Isoforms, HLA-DR2 Antigen, Binding Sites, HLA-DR alpha-Chains, Antigen presentation, Molecular dynamics, Protein-protein binding, Structural modulation, Underpinning research, 1.1 Normal biological development and functioning, 2.1 Biological and endogenous factors, Aetiology, Inflammatory and immune system, Generic health relevance, Biochemistry and Cell Biology, Biochemistry & Molecular Biology

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/6c79587vTest

المؤلفون: Tsishyn, Matsvei, Pucci, Fabrizio, Rooman, Marianne

المصدر: Briefings in bioinformatics, 25 (1

مصطلحات موضوعية: Sciences bio-médicales et agricoles, machine learning, prediction biases, protein complex structure, protein-protein binding affinity, protein-protein interactions, symmetry principle

وصف الملف: 1 full-text file(s): application/pdf

العلاقة: uri/info:doi/10.1093/bib/bbad491; uri/info:pmid/38197311; uri/info:scp/85182087184; https://dipot.ulb.ac.be/dspace/bitstream/2013/369329/1/doi_352973.pdfTest; http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/369329Test

الإتاحة: http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/369329Test

المؤلفون: Feifan Zheng, Xin Jiang, Yuhao Wen, Yan Yang, Minghui Li

المصدر: Computational and Structural Biotechnology Journal, Vol 23, Iss , Pp 460-472 (2024)

مصطلحات موضوعية: Protein-protein binding affinity, Machine learning methods, Tools, Biotechnology, TP248.13-248.65

العلاقة: http://www.sciencedirect.com/science/article/pii/S2001037023004920Test; https://doaj.org/toc/2001-0370Test; https://doaj.org/article/ec75bc088f3c43d29f0503f210929d2fTest

الإتاحة: https://doi.org/10.1016/j.csbj.2023.12.018Test
https://doaj.org/article/ec75bc088f3c43d29f0503f210929d2fTest

المؤلفون: Sankar Basu, Devlina Chakravarty, Qingzhen Hou, Vladimir N. Uversky

المصدر: Frontiers in Molecular Biosciences, Vol 10 (2023)

مصطلحات موضوعية: protein design, intrinsically disordered proteins (IDPs), disorder—globular interface, mutational scanning, disorder transitions in proteins, prediction of protein-protein binding sites of IDPs, Biology (General), QH301-705.5

وصف الملف: electronic resource

العلاقة: https://www.frontiersin.org/articles/10.3389/fmolb.2023.1151676/fullTest; https://doaj.org/toc/2296-889XTest

الوصول الحر: https://doaj.org/article/d251288f53fa4a1fb14a07002f98d314Test

المؤلفون: Basu, Sankar, Chakravarty, Devlina, Hou, Qingzhen, Uversky, Vladimir N.

المصدر: Molecular Medicine Faculty Publications

مصطلحات موضوعية: Protein Design, Intrinsically Disordered Proteins (Idps), Disorder—globular Interface, Mutational Scanning, Disorder Transitions in Proteins, Prediction of Protein-protein Binding Sites of Idps, Multi-step Electron-transfer Activity, High Throughput Approach, Medicine and Health Sciences

وصف الملف: application/pdf

العلاقة: https://digitalcommons.usf.edu/mme_facpub/1057Test; https://digitalcommons.usf.edu/context/mme_facpub/article/2048/viewcontent/fmolb_10_1151676.pdfTest

الإتاحة: https://doi.org/10.3389/fmolb.2023.1151676Test
https://digitalcommons.usf.edu/mme_facpub/1057Test
https://digitalcommons.usf.edu/context/mme_facpub/article/2048/viewcontent/fmolb_10_1151676.pdfTest

المؤلفون: Jiajun Qiu, Dmitrii Nechaev, Burkhard Rost

المصدر: BMC Bioinformatics, Vol 21, Iss 1, Pp 1-17 (2020)

مصطلحات موضوعية: Genome sequence analysis, Single amino acid variants (SAVs), Macro-molecular binding residues, DNA-binding, RNA-binding, Protein–protein binding, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

العلاقة: http://link.springer.com/article/10.1186/s12859-020-03759-0Test; https://doaj.org/toc/1471-2105Test

الوصول الحر: https://doaj.org/article/f6b5d8ccb35949a6adebafd03014bb8dTest

المؤلفون: Zhi-Bi Zhang, Yuan-Ling Xia, Jian-Xin Shen, Wen-Wen Du, Yun-Xin Fu, Shu-Qun Liu

المصدر: Cells; Volume 11; Issue 8; Pages: 1274

مصطلحات موضوعية: molecular dynamics, binding free energy calculations, electrostatic interactions, amino acid residue changes, protein-protein binding affinity, binding interfaces

وصف الملف: application/pdf

العلاقة: Cell Methods; https://dx.doi.org/10.3390/cells11081274Test

الإتاحة: https://doi.org/10.3390/cells11081274Test

المؤلفون: Guilherme C. Lechuga, Paloma Napoleão-Pêgo, Carlos M. Morel, David W. Provance, Salvatore G. De-Simone

المصدر: International Journal of Molecular Sciences; Volume 23; Issue 7; Pages: 3789

مصطلحات موضوعية: hemopexin, hemoglobin, protein-protein binding, hemin

جغرافية الموضوع: agris

وصف الملف: application/pdf

العلاقة: Molecular Pathology, Diagnostics, and Therapeutics; https://dx.doi.org/10.3390/ijms23073789Test

الإتاحة: https://doi.org/10.3390/ijms23073789Test

المؤلفون: Xianggen Liu (11232118), Yunan Luo (7345178), Pengyong Li (5909552), Sen Song (8305), Jian Peng (117876)

مصطلحات موضوعية: Biophysics, Biochemistry, Molecular Biology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, binding affinities, receptor-binding domain, protein-protein binding affinity, protein-protein binding affinity Mo., modeling effects, novel structure-based deep-learning., training gradient-boosting trees, benchmark datasets, protein engineering, protein structure, GeoPPI, RBD, drug design, representation, multi-point mutations, protein design, protein-protein interaction, S protein, binding affinity, binding affinity changes, encodes topology features, protein structures, acid mutations, SARS-CoV -2 antibodies

العلاقة: https://figshare.com/articles/journal_contribution/GeoPPI_identifies_mutationally_constrained_regions_in_the_SARS-CoV-2_spike_N-terminal_domain_/15108247Test

الإتاحة: https://doi.org/10.1371/journal.pcbi.1009284.s002Test

المؤلفون: Xianggen Liu (11232118), Yunan Luo (7345178), Pengyong Li (5909552), Sen Song (8305), Jian Peng (117876)

مصطلحات موضوعية: Biophysics, Biochemistry, Molecular Biology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, binding affinities, receptor-binding domain, protein-protein binding affinity, protein-protein binding affinity Mo., modeling effects, novel structure-based deep-learning., training gradient-boosting trees, benchmark datasets, protein engineering, protein structure, GeoPPI, RBD, drug design, representation, multi-point mutations, protein design, protein-protein interaction, S protein, binding affinity, binding affinity changes, encodes topology features, protein structures, acid mutations, SARS-CoV -2 antibodies

العلاقة: https://figshare.com/articles/journal_contribution/The_similarities_between_arbitrary_two_complexes_in_the_M1707_dataset_measured_by_the_TMalgin_software_/15108256Test

الإتاحة: https://doi.org/10.1371/journal.pcbi.1009284.s005Test