المؤلفون: Ju Hun Choi, Taegun Kim, Junghyun Jung, Jong Wha J. Joo

المصدر: BMC Genomics, Vol 21, Iss S10, Pp 1-7 (2020)

مصطلحات موضوعية: Regulatory hotspot, Parallel processing, Web-based tool, Google cloud compute engine (GCE), PLINK, VCF (variant call format), Biotechnology, TP248.13-248.65, Genetics, QH426-470

وصف الملف: electronic resource

العلاقة: http://link.springer.com/article/10.1186/s12864-020-07012-zTest; https://doaj.org/toc/1471-2164Test

الوصول الحر: https://doaj.org/article/d81e61f109104b348e53be06cf1bd125Test

المؤلفون: Ari Turunen, Aarno Palotie, Tommi Nyrönen

مصطلحات موضوعية: Data harmony, Data standards, Metadata, VCF (Variant Call Format), BAM (Binary Alignment/Map), GA4GH (Global Alliance for Genomics and Health), ELIXIR

العلاقة: info:eu-repo/grantAgreement/AKA//319968/; https://zenodo.org/communities/cscTest; https://zenodo.org/communities/elixir-fiTest; https://zenodo.org/record/8118815Test; https://doi.org/10.5281/zenodo.8118815Test; oai:zenodo.org:8118815

الإتاحة: https://doi.org/10.5281/zenodo.8118815Test
https://doi.org/10.5281/zenodo.8118814Test
https://zenodo.org/record/8118815Test

المؤلفون: Junghyun Jung, Taegun Kim, Ju Hun Choi, Jong Wha J. Joo

المصدر: BMC Genomics, Vol 21, Iss S10, Pp 1-7 (2020)
BMC Genomics

مصطلحات موضوعية: lcsh:QH426-470, Computational complexity theory, lcsh:Biotechnology, Quantitative Trait Loci, Saccharomyces cerevisiae, Biology, eQTL, computer.software_genre, 03 medical and health sciences, 0302 clinical medicine, lcsh:TP248.13-248.65, Hotspot (geology), Parallel processing, Genetics, PLINK, Web application, Web-based tool, Spurious relationship, 030304 developmental biology, VCF (variant call format), Internet, 0303 health sciences, Models, Statistical, Google cloud compute engine (GCE), business.industry, Methodology, Chromosome Mapping, Statistical model, Running time, lcsh:Genetics, Fully automated, Data mining, Web service, business, Regulatory hotspot, computer, 030217 neurology & neurosurgery, Biotechnology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::585d316d2cdae223ebf8b3b662dd54b6Test
https://doi.org/10.1186/s12864-020-07012-zTest

المؤلفون: Lennart Martens, Eric W. Deutsch, Oliver Kohlbacher, Nuno Bandeira, Juan Antonio Vizcaíno

المصدر: Molecular & Cellular Proteomics
Molecular & Cellular Proteomics : MCP

مصطلحات موضوعية: Proteomics, Information privacy, Computer science, Data management, NIST, National Institute of Standards and Technology, Biochemistry, PSM, Peptide Spectrum Match, Field (computer science), Analytical Chemistry, NIH, National Institutes of Health, HIPAA, Health Insurance Portability and Accountability, DIA, Data Independent Acquisition, SMEs, Small and Medium-sized Enterprises, GEO, Gene Expression Omnibus, Data Management, mass spectrometry, media_common, 0303 health sciences, Variant Call Format, 030302 biochemistry & molecular biology, EGA, European Genome-phenome Archive, GA4GH, Global Alliance for Genomics and Health, 3. Good health, DAC, Data Access Committee, General Data Protection Regulation, Perspective, CPTAC, Clinical Proteome Tumor Analysis Consortium, HCD, Higher-energy collisional dissociation, SAAVs, Single Amino Acid Variants, Personally identifiable information, Confidentiality, policy, dbGAP, database of Genotypes and Phenotypes, IRB, Institutional Review Board, databases, JGA, Japanese Genotype-phenotype Archive, VCF, Variant Call Format, EBI, European Bioinformatics Institute, AD, Alzheimer’s disease, GDPR, General Data Protection Regulation, 03 medical and health sciences, PRM, Parallel Reaction Monitoring, Humans, media_common.cataloged_instance, European union, Molecular Biology, PII, Personally Identifiable Information, SRM, Selected Reaction Monitoring, 030304 developmental biology, FDR, False Discovery Rate, MS, Mass Spectrometry, Information Dissemination, business.industry, controlled access data, ethics, Data science, PTM, Posttranslational Modification, ComputingMethodologies_PATTERNRECOGNITION, DDA, Data-Dependent Acquisition, business

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::636805ad221cca2eb91ac4d7b88355d6Test
https://doi.org/10.1016/j.mcpro.2021.100071Test

المؤلفون: Yue Qi, Mohammad Haghir Ebrahimabadi, Khoa D. Nguyen, Shaojian Gao, Tapan K. Maity, Xu Zhang, Vikram Misra, Udayan Guha, Javed Khan, Constance M. Cultraro, Cenk Sahinalp, David Milewski, Catherine Ade, Ken-ichi Hanada, James Chih-Hsin Yang

المصدر: Molecular & Cellular Proteomics : MCP

مصطلحات موضوعية: Male, RT, retention time, Lung Neoplasms, SSP, sequence-specific primer, medicine.medical_treatment, DMSO, dimethyl sulfoxide, Biochemistry, WES, whole-exome sequencing, Analytical Chemistry, HI, hydrophobicity index, MS/MS, tandem MS, Epidermal growth factor receptor, Melanoma, Proteogenomics, CIP2A, cellular inhibitor of PP2A, biology, LDHC, lactate dehydrogenase C, Transporter associated with antigen processing, ErbB Receptors, COSMIC, Catalogue of Somatic Mutations in Cancer, DB, database, Adenocarcinoma, immunotherapy, BLAT, BLAST-like Alignment Tool, FDR, false discovery rate, GWIPS, Genome-Wide Information on Protein Synthesis, Adenocarcinoma of Lung, IGV, Integrative Genomics Viewer, Human leukocyte antigen, NCI, National Cancer Institute, Special Issue: Immunopeptidomics, FBS, fetal bovine serum, Antigen, Antigens, Neoplasm, PTM, post-translationally modified, Cell Line, Tumor, ACT, adoptive T-cell therapy, medicine, Humans, HLA immunopeptidome, TAP, transporter associated with antigen processing, Lung cancer, Molecular Biology, CG, cancer germ line, Aged, pyroGlu, pyroglutamate, ATCC, American Type Culture Collection, IEDB, Immune Epitope Database and Analysis Resource, HLA, human leukocyte antigen, SNV, single nucleotide variant, Research, ALC, average local confidence, EIF, eukaryotic initiation factor, Histocompatibility Antigens Class I, Cancer, Immunotherapy, ACN, acetonitrile, IPA, ingenuity pathway analysis, VCF, variant call format, medicine.disease, neoantigen, EGFR, epidermal growth factor receptor, NGS, next-generation sequencing, lung cancer, INDEL, insertion and deletion, Mutation, Cancer research, biology.protein, lncRNA, long noncoding RNA, Peptides, CCR, Center for Cancer Research, TMB, tumor mutational burden

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::31a512a9af5db7e9b56f4226206fd2ecTest
https://doi.org/10.1016/j.mcpro.2021.100136Test

المؤلفون: Christoph Endrullat, Marcus Frohme, Philipp Franke, Jörn Glökler

المصدر: Applied & Translational Genomics, 10, S. 2-9
Applied and Translational Genomics, Vol 10, Iss C, Pp 2-9 (2016)
Applied & Translational Genomics

مصطلحات موضوعية: 0301 basic medicine, Quality management, Standardization, Computer science, Pharmaceutical Science, ERCC, External RNA Controls Consortium, NIST, National Institute of Standards and Technology, Guideline, computer.software_genre, SAM, sequence alignment/map, Documentation, MAQC, MicroArray Quality Control Project, ABRF, Association of Biomolecular Resource Facilities, TN, technical note, Validation, ddPCR, digital droplet PCR, media_common, HGP, Human Genome Project, QM, quality management, CEN, European Committee for Standardization, BAM, binary alignment/map, Nex-StoCT, next generation sequencing — standardization of clinical testing, SNP, single nucleotide polymorphism, QMS, quality management system, Risk analysis (engineering), Data mining, Biotechnology, GATK, genome analysis toolkit, MIGS, minimum information about a genome sequence, RIN, RNA integrity number, Traceability, lcsh:QH426-470, media_common.quotation_subject, CAP, College of American Pathologist's, MOL, molecular pathology checklist, Article, PT, proficiency testing, FMEA, failure mode and effects analysis, 03 medical and health sciences, ddc:570, Quality (business), Molecular Biology, FFPE, formalin-fixed, paraffin-embedded, Accreditation, CLIA, Clinical Laboratory Improvement Amendments, Data quality, SEQC, sequencing quality control, VCF, variant call format, FDA, Food and Drug Administration, Indel, insertion or deletion, mtDNA, mitochondrial DNA, NGS, next-generation sequencing, QC, quality control, SOP, standard operating procedure, lcsh:Genetics, 030104 developmental biology, Workflow, Next-generation sequencing, qPCR, quantitative PCR, GSC, Genomic Standards Consortium, computer, QA, quality assurance, NTC, no-template control

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::233ad41430819025a4b97ab69bbcc723Test
https://opus4.kobv.de/opus4-th-wildau/frontdoor/index/index/docId/663Test