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1
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2دورية أكاديمية
المؤلفون: Lee, Nicholas Keone, Tang, Ziqi, Toneyan, Shushan, Koo, Peter K.
المساهمون: National Human Genome Research Institute
المصدر: Genome Biology ; volume 24, issue 1 ; ISSN 1474-760X
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3تقرير
المؤلفون: Tang, Ziqi, Toneyan, Shushan, Koo, Peter K
مصطلحات موضوعية: bioinformatics, genomics and proteomics, animal, hominids, human, mammal, primates
وصف الملف: application/pdf
العلاقة: https://repository.cshl.edu/id/eprint/41332/1/s41588-023-01517-5%20%281%29.pdfTest; Tang, Ziqi, Toneyan, Shushan, Koo, Peter K (December 2023) Current approaches to genomic deep learning struggle to fully capture human genetic variation. Nature Genetics, 55 (12). pp. 2021-2022. ISSN 1061-4036
الإتاحة: https://doi.org/10.1038/s41588-023-01517-5Test
https://repository.cshl.edu/id/eprint/41332Test/
https://repository.cshl.edu/id/eprint/41332/1/s41588-023-01517-5%20%281%29.pdfTest
https://www.ncbi.nlm.nih.gov/pubmed/38036789Test -
4تقرير
المؤلفون: Toneyan, Shushan, Koo, Peter K
مصطلحات موضوعية: gene regulation, genomes, neural networks
وصف الملف: application/pdf
العلاقة: https://repository.cshl.edu/id/eprint/40963/1/2023_Toneyan_Interpreting_Cis_Regulatory_Interactions_from.pdfTest; Toneyan, Shushan, Koo, Peter K (July 2023) Interpreting Cis -Regulatory Interactions from Large-Scale Deep Neural Networks for Genomics. bioRxiv. (Submitted)
الإتاحة: https://doi.org/10.1101/2023.07.03.547592Test
https://repository.cshl.edu/id/eprint/40963Test/
https://repository.cshl.edu/id/eprint/40963/1/2023_Toneyan_Interpreting_Cis_Regulatory_Interactions_from.pdfTest
https://www.ncbi.nlm.nih.gov/pubmed/37461616Test -
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المؤلفون: Toneyan, Shushan, Koo, Peter
مصطلحات موضوعية: Deep Learning, Genomics, Interpretability
العلاقة: https://dx.doi.org/10.1101/2023.07.03.547592Test; https://dx.doi.org/10.5281/zenodo.12584209Test
الإتاحة: https://doi.org/10.5281/zenodo.1258421010.1101/2023.07.03.54759210.5281/zenodo.12584209Test
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6تقرير
المؤلفون: Majdandzic, Antonio, Rajesh, Chandana, Tang, Amber, Toneyan, Shushan, Labelson, Ethan, Tripathy, Rohit, Koo, Peter K
مصطلحات موضوعية: bioinformatics, genetics & nucleic acid processing, genomics and proteomics, comparative genomics, genomes, neural networks
وصف الملف: application/pdf
العلاقة: https://repository.cshl.edu/id/eprint/40956/1/Selecting%20deep%20neural%20networks%20that%20yield%20consistent%20attribution-based%20interpretations%20for%20genomics.pdfTest; Majdandzic, Antonio, Rajesh, Chandana, Tang, Amber, Toneyan, Shushan, Labelson, Ethan, Tripathy, Rohit, Koo, Peter K (November 2022) Selecting deep neural networks that yield consistent attribution-based interpretations for genomics. Proc Mach Learn Res, 200. pp. 131-149. ISSN 2640-3498
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7تقرير
المؤلفون: Lee, Nicholas Keone, Tang, Ziqi, Toneyan, Shushan, Koo, Peter
مصطلحات موضوعية: genomes, neural networks
وصف الملف: application/pdf
العلاقة: https://repository.cshl.edu/id/eprint/41095/1/2022_Lee_EvoAug_improving_generalization_and_interpretability_preprint.pdfTest; Lee, Nicholas Keone, Tang, Ziqi, Toneyan, Shushan, Koo, Peter (2022) EvoAug: improving generalization and interpretability of genomic deep neural networks with evolution-inspired data augmentations. (Submitted)
الإتاحة: https://doi.org/10.1101/2022.11.03.515117Test
https://repository.cshl.edu/id/eprint/41095Test/
https://repository.cshl.edu/id/eprint/41095/1/2022_Lee_EvoAug_improving_generalization_and_interpretability_preprint.pdfTest -
8تقرير
المؤلفون: Toneyan, Shushan, Tang, Ziqi, Koo, Peter K
مصطلحات موضوعية: epigenetics, machine learning
وصف الملف: application/pdf
العلاقة: https://repository.cshl.edu/id/eprint/41100/1/Evaluating%20deep%20learning%20for%20predicting%20epigenomic%20profiles.pdfTest; Toneyan, Shushan, Tang, Ziqi, Koo, Peter K (December 2022) Evaluating deep learning for predicting epigenomic profiles. Nature Machine Intelligence, 4 (12). pp. 1088-1100. ISSN 2522-5839
الإتاحة: https://doi.org/10.1038/s42256-022-00570-9Test
https://repository.cshl.edu/id/eprint/41100Test/
https://repository.cshl.edu/id/eprint/41100/1/Evaluating%20deep%20learning%20for%20predicting%20epigenomic%20profiles.pdfTest
https://www.ncbi.nlm.nih.gov/pubmed/37324054Test -
9دورية أكاديمية
المؤلفون: Zhao, Yixin, Dukler, Noah, Barshad, Gilad, Toneyan, Shushan, Danko, Charles G, Siepel, Adam
المساهمون: Alkan, Can, US National Institutes of Health, Simons Center for Quantitative Biology
المصدر: Bioinformatics ; volume 37, issue 24, page 4727-4736 ; ISSN 1367-4803 1367-4811
مصطلحات موضوعية: Computational Mathematics, Computational Theory and Mathematics, Computer Science Applications, Molecular Biology, Biochemistry, Statistics and Probability
الإتاحة: https://doi.org/10.1093/bioinformatics/btab582Test
https://academic.oup.com/bioinformatics/article-pdf/37/24/4727/50334882/btab582.pdfTest -
10دورية أكاديمية
المؤلفون: Gao, Yuan, He, Xue-Yan, Wu, Xiaoli S., Huang, Yu-Han, Toneyan, Shushan, Ha, Taehoon, Ipsaro, Jonathan J., Koo, Peter K., Joshua-Tor, Leemor, Bailey, Kelly M., Egeblad, Mikala, Vakoc, Christopher R.
المصدر: Nature Cell Biology ; ISSN 1465-7392 1476-4679
مصطلحات موضوعية: Cell Biology
الإتاحة: https://doi.org/10.1038/s41556-022-01060-1Test
https://www.nature.com/articles/s41556-022-01060-1.pdfTest
https://www.nature.com/articles/s41556-022-01060-1Test