-
1دورية أكاديمية
المساهمون: Department of Medicine, Program in Molecular Medicine, Program in Gene Function and Expression
المصدر: PloS one ; 9 ; e108424
مصطلحات موضوعية: Comparative sequence analysis, Gene targeting, Genome analysis, Nucleases, Sequence analysis, Sequence motif analysis, Software-aided sequence analysis, Bioinformatics, Computational Biology, Genomics, Integrative Biology
العلاقة: Link to Article in PubMed; http://dx.doi.org/10.1371/journal.pone.0108424Test; Zhu LJ, Holmes BR, Aronin N, Brodsky MH (2014) CRISPRseek: A Bioconductor Package to Identify Target-Specific Guide RNAs for CRISPR-Cas9 Genome-Editing Systems. PLoS ONE 9(9): e108424. doi:10.1371/journal.pone.0108424 Link to article on publisher's site; 1932-6203 (Linking); http://hdl.handle.net/20.500.14038/44046Test; https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1262&context=pgfe_pp&unstamped=1Test; https://escholarship.umassmed.edu/pgfe_pp/261Test; 6324037; pgfe_pp/261
الإتاحة: https://doi.org/10.1371/journal.pone.0108424Test
https://doi.org/20.500.14038/44046Test
https://hdl.handle.net/20.500.14038/44046Test
https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1262&context=pgfe_pp&unstamped=1Test
https://escholarship.umassmed.edu/pgfe_pp/261Test -
2
المؤلفون: Mikaël Salson, Ryan Herbert, Marc Duez, Mathieu Giraud, Florian Thonier, Tatiana Rocher
المساهمون: Site de Recherche Intégrée en Cancérologie ( SIRIC-ONCOLille ), Université de Lille, Sciences et Technologies-Université de Lille, Sciences Humaines et Sociales-CRLCC Oscar Lambret-Cancéropole Nord-Ouest-Université de Lille, Droit et Santé-Centre Hospitalier Régional Universitaire [Lille] ( CHRU Lille ), School of Social and Community Medicine [Bristol], University of Bristol [Bristol], Centre de Recherche en Informatique, Signal et Automatique de Lille (CRIStAL) - UMR 9189 ( CRIStAL ), Institut National de Recherche en Informatique et en Automatique ( Inria ) -Ecole Centrale de Lille-Institut Mines-Télécom [Paris]-Université de Lille-Centre National de la Recherche Scientifique ( CNRS ), Bioinformatics and Sequence Analysis ( BONSAI ), Université de Lille, Sciences et Technologies-Inria Lille - Nord Europe, Institut National de Recherche en Informatique et en Automatique ( Inria ) -Institut National de Recherche en Informatique et en Automatique ( Inria ) -Centre de Recherche en Informatique, Signal et Automatique de Lille (CRIStAL) - UMR 9189 ( CRIStAL ), Institut National de Recherche en Informatique et en Automatique ( Inria ) -Ecole Centrale de Lille-Institut Mines-Télécom [Paris]-Université de Lille-Centre National de la Recherche Scientifique ( CNRS ) -Ecole Centrale de Lille-Institut Mines-Télécom [Paris]-Université de Lille-Centre National de la Recherche Scientifique ( CNRS ) -Centre National de la Recherche Scientifique ( CNRS ), Institut Necker Enfants-Malades (INEM) ( INEM - UM 111 (UMR 8253 / U1151) ), Université Paris Descartes - Paris 5 ( UPD5 ) -Institut National de la Santé et de la Recherche Médicale ( INSERM ) -Centre National de la Recherche Scientifique ( CNRS ), SIRIC ONCOLille, Grant INCa-DGOS-Inserm 6041, Fondation EDF, Site de Recherche Intégrée en Cancérologie (SIRIC-ONCOLille), Université de Lille, Sciences et Technologies-Université de Lille, Sciences Humaines et Sociales-Centre Régional de Lutte contre le Cancer Oscar Lambret [Lille] (UNICANCER/Lille), Université Lille Nord de France (COMUE)-UNICANCER-Université Lille Nord de France (COMUE)-UNICANCER-Cancéropole Nord-Ouest-Université de Lille, Droit et Santé-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille), Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189 (CRIStAL), Centrale Lille-Université de Lille-Centre National de la Recherche Scientifique (CNRS), Bioinformatics and Sequence Analysis (BONSAI), Centre National de la Recherche Scientifique (CNRS)-Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189 (CRIStAL), Centrale Lille-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Centrale Lille-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Université de Lille, Sciences et Technologies-Inria Lille - Nord Europe, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria), Institut Necker Enfants-Malades (INEM - UM 111 (UMR 8253 / U1151)), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Université de Lille-UNICANCER-Université de Lille-UNICANCER-Cancéropole Nord-Ouest-Université de Lille, Droit et Santé-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille), Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189 (CRIStAL), Centrale Lille-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Centrale Lille-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Salson, Mikaël
المصدر: PLoS ONE
PLoS ONE, Public Library of Science, 2016, 11 (11), 〈10.1371/journal.pone.0166126〉
PLoS ONE, Vol 11, Iss 11, p e0166126 (2016)
PLoS ONE, Public Library of Science, 2016, 11 (11), ⟨10.1371/journal.pone.0166126⟩
PLoS ONE, 2016, 11 (11), ⟨10.1371/journal.pone.0166126⟩مصطلحات موضوعية: 0301 basic medicine, lymphocytes, Source code, [INFO.INFO-DS] Computer Science [cs]/Data Structures and Algorithms [cs.DS], Repertoire sequencing RepSeq, computer.software_genre, Computer Applications, Software-aided sequence analysis, Hematologic Cancers and Related Disorders, Database and Informatics Methods, White Blood Cells, 0302 clinical medicine, Animal Cells, Medicine and Health Sciences, VDJ recombinations, computer.programming_language, media_common, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM], Genetics, education.field_of_study, Multidisciplinary, Applied Mathematics, Simulation and Modeling, Acute lymphoblastic leukaemia, Hematology, Acute Lymphoblastic Leukemia, 3. Good health, Physical sciences, Oncology, Web-Based Applications, Lymphoblastic Leukemia, computer software, Medicine, The Internet, Cellular Types, Sequence Analysis, Algorithms, Research Article, FASTQ format, Computer and Information Sciences, Web server, Bioinformatics, Immune Cells, media_common.quotation_subject, Science, Immunology, Population, [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS], Sequence Databases, Biology, Research and Analysis Methods, JavaScript, 03 medical and health sciences, [ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM], Leukemias, Web application, Molecular Biology Techniques, Sequencing Techniques, education, Molecular Biology, web-based application, BLAST algorithm, [ INFO.INFO-DS ] Computer Science [cs]/Data Structures and Algorithms [cs.DS], Blood Cells, business.industry, Biology and Life Sciences, Cancers and Neoplasms, Cell Biology, Python (programming language), Biological Databases, 030104 developmental biology, Operating system, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], business, Sequence Alignment, computer, Mathematics, 030215 immunology
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4d6e2c6cd8f27c7ee700766893ed8e80Test
https://hal.archives-ouvertes.fr/hal-01397079/file/journal.pone.0166126.PDFTest -
3
المؤلفون: Yixin Gu, Hao Liang, Yuanhai You, Maojun Zhang, Jianzhong Zhang, Aiyu Zhang
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 10, p e0165159 (2016)مصطلحات موضوعية: 0301 basic medicine, Serotype, lcsh:Medicine, Artificial Gene Amplification and Extension, Pathology and Laboratory Medicine, Biochemistry, Polymerase Chain Reaction, Virulence factor, Software-aided sequence analysis, chemistry.chemical_compound, Database and Informatics Methods, Gene cluster, Medicine and Health Sciences, lcsh:Science, Genetics, Multidisciplinary, Genomics, Genomic Databases, Simulation and modeling, Bacterial Pathogens, Enzymes, Physical sciences, Medical Microbiology, Multigene Family, Pathogens, Sequence Analysis, Algorithms, Research Article, Bioinformatics, 030106 microbiology, Sequence Databases, Locus (genetics), Biology, Biosynthesis, Research and Analysis Methods, Campylobacter jejuni, Microbiology, 03 medical and health sciences, Transferases, Genetic variation, Molecular Biology Techniques, Sequencing Techniques, Gene, Molecular Biology, Microbial Pathogens, BLAST algorithm, Bacterial Capsules, Bacteria, lcsh:R, Organisms, Biology and Life Sciences, Proteins, Computational Biology, Genetic Variation, Campylobacter, biology.organism_classification, Genome Analysis, Applied mathematics, Biological Databases, chemistry, Genetic Loci, Enzymology, lcsh:Q, DNA, Mathematics
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::87ca56aeb637edcad081532ab000d2efTest
http://europepmc.org/articles/PMC5082957Test -
4
المؤلفون: Federico Alberto Zuljan, Martín Espariz, Luis Esteban, Christian Magni
المصدر: CONICET Digital (CONICET)
Consejo Nacional de Investigaciones Científicas y Técnicas
instacron:CONICET
PLoS ONE, Vol 11, Iss 9, p e0163098 (2016)
PLoS ONEمصطلحات موضوعية: 0301 basic medicine, Decision Analysis, lcsh:Medicine, Bacillus, Forests, Pathology and Laboratory Medicine, Genome, Software-aided sequence analysis, purl.org/becyt/ford/1 [https], Database and Informatics Methods, Medicine and Health Sciences, lcsh:Science, Data Management, Multidisciplinary, Ecology, Phylogenetic tree, Bacillus pumilus, Phylogenetic Analysis, Randomforests, Genomics, Genomic Databases, Terrestrial Environments, Simulation and modeling, Bacterial Pathogens, Phylogenetics, Physical sciences, Bacillus Subtilis, Medical Microbiology, Taxonomic Resulution, Engineering and Technology, Prokaryotic Models, Pathogens, Management Engineering, Algorithms, CIENCIAS NATURALES Y EXACTAS, Research Article, Computer and Information Sciences, Bioinformatics, In silico, Otras Ciencias Biológicas, 030106 microbiology, Biology, Research and Analysis Methods, Microbiology, Ecosystems, Ciencias Biológicas, 03 medical and health sciences, Model Organisms, Genetics, Evolutionary Systematics, B. Pumilus, Molecular Biology Techniques, purl.org/becyt/ford/1.6 [https], Microbial Pathogens, Molecular Biology, BLAST algorithm, Taxonomy, Evolutionary Biology, Molecular Biology Assays and Analysis Techniques, Bacteria, Ecology and Environmental Sciences, Decision Trees, lcsh:R, Organisms, Biology and Life Sciences, Computational Biology, Genome Analysis, Applied mathematics, biology.organism_classification, Biological Databases, 030104 developmental biology, Taxon, Metagenomics, Evolutionary biology, lcsh:Q, Mathematics
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0ffe37d3cbe65773c470f8d503e444e9Test
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0163098Test -
5
المؤلفون: Masanori Kakuta, Takashi Ishida, Yutaka Akiyama, Shuji Suzuki
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 8, p e0157338 (2016)مصطلحات موضوعية: 0301 basic medicine, Time Factors, Fold (higher-order function), Computer science, lcsh:Medicine, Sequence Homology, computer.software_genre, Software-aided sequence analysis, Computer Architecture, Database and Informatics Methods, Cognition, Learning and Memory, Search algorithm, Databases, Genetic, Cluster Analysis, Graphics, Database Searching, lcsh:Science, Multidisciplinary, Database, Genomics, Simulation and modeling, Physical sciences, Central processing unit, Sequence Analysis, Algorithms, Research Article, Optimization, Computer and Information Sciences, Bioinformatics, Computation, Sequence Databases, Homology (mathematics), Software_PROGRAMMINGTECHNIQUES, Research and Analysis Methods, Computing Methodologies, 03 medical and health sciences, Memory, Subsequence, Genetics, Computer Graphics, Animals, Humans, Cluster analysis, Molecular Biology Techniques, Sequencing Techniques, Sequence Similarity Searching, Molecular Biology, BLAST algorithm, lcsh:R, Biology and Life Sciences, Proteins, DNA, Applied mathematics, 030104 developmental biology, Biological Databases, Cognitive Science, lcsh:Q, Metagenomics, computer, Mathematics, Software, Neuroscience
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::167f73fadf91fd2091a6a83e75a3dd48Test
http://t2r2.star.titech.ac.jp/cgi-bin/publicationinfo.cgi?q_publication_content_number=CTT100738036Test -
6
المؤلفون: Tao Yang, Xing Liu, You-Hao Guo, Tian-lei Zhang
المصدر: PLoS ONE, Vol 11, Iss 11, p e0166177 (2016)
PLoS ONEمصطلحات موضوعية: Plant Phylogenetics, 0106 biological sciences, Plant Evolution, lcsh:Medicine, Artificial Gene Amplification and Extension, Plant Science, Polymerase Chain Reaction, 01 natural sciences, Database and Informatics Methods, Plastids, lcsh:Science, Phylogeny, Data Management, Multidisciplinary, Concerted evolution, biology, Phylogenetic tree, Phylogenetic Analysis, Potamogetonaceae, Phylogenetics, Chloroplast DNA, Heuristic Alignment Procedure, Software-Aided Sequence Analysis, Sequence Analysis, Research Article, Genetic Markers, Computer and Information Sciences, Evolutionary Processes, Bioinformatics, Research and Analysis Methods, 010603 evolutionary biology, Botany, DNA, Ribosomal Spacer, DNA Barcoding, Taxonomic, Evolutionary Systematics, Internal transcribed spacer, Potamogeton, Plastid, Molecular Biology Techniques, Sequencing Techniques, Molecular Biology, Hybridization, Taxonomy, Hybrid, Evolutionary Biology, Molecular Biology Assays and Analysis Techniques, Chimera, lcsh:R, Biology and Life Sciences, Sequence Analysis, DNA, biology.organism_classification, Organismal Evolution, lcsh:Q, Sequence Alignment, Cloning, 010606 plant biology & botany
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fdf657684f5cbc31a63f3325c78316c2Test
https://pubmed.ncbi.nlm.nih.gov/36584071Test -
7
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 7, p e0159043 (2016)مصطلحات موضوعية: 0301 basic medicine, lcsh:Medicine, Pucciniomycetes, Artificial Gene Amplification and Extension, DNA barcoding, Polymerase Chain Reaction, Software-aided sequence analysis, lcsh:Science, DNA, Fungal, DNA extraction, Data Management, Genetics, Multidisciplinary, biology, Ascomycota, Database and informatics methods, Fungal genetics, Ribosome Subunits, Large, Eukaryotic, Simulation and modeling, Physical sciences, Sequence Analysis, Algorithms, Research Article, Computer and Information Sciences, Bioinformatics, 030106 microbiology, Mycology, Research and Analysis Methods, 03 medical and health sciences, Extraction techniques, Species Specificity, DNA, Ribosomal Spacer, DNA Barcoding, Taxonomic, Fungal Genetics, Internal transcribed spacer, Molecular Biology Techniques, Sequencing Techniques, Ribosomal DNA, Molecular Biology, BLAST algorithm, Taxonomy, DNA Primers, Basidiomycota, lcsh:R, Organisms, Fungi, Biology and Life Sciences, 15. Life on land, biology.organism_classification, Applied mathematics, Ascomycetes, Microbotryomycetes, 030104 developmental biology, lcsh:Q, Tremellomycetes, Sequence Alignment, Mathematics
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8c873ec14437429e0db04e32974e69b0Test
http://europepmc.org/articles/PMC4938210Test -
8
المؤلفون: Philip Wallhead, Ramiro Logares, B. G. Crespo, Carlos Pedrós-Alió
المساهمون: Ministerio de Ciencia e Innovación (España)
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 7, p e0159195 (2016)
Digital.CSIC. Repositorio Institucional del CSIC
instnameمصطلحات موضوعية: 0301 basic medicine, Biodiversity, lcsh:Medicine, Marine and Aquatic Sciences, Biochemistry, Software-aided sequence analysis, Databases, Genetic, Relative Abundance Distribution, lcsh:Science, Multidisciplinary, Ecology, Geography, Database and informatics methods, Marine Ecology, Biosphere, High-Throughput Nucleotide Sequencing, Marine Bacteria, Simulation and modeling, Physical sciences, Nucleic acids, Ribosomal RNA, Algorithms, Research Article, Cell biology, Cellular structures and organelles, Rare biosphere, Ecological Metrics, Bioinformatics, Marine Biology, Biology, 03 medical and health sciences, Species Specificity, Mediterranean Sea, Non-coding RNA, Relative species abundance, Relative abundance distribution, BLAST algorithm, Bacteria, Base Sequence, lcsh:R, Ecology and Environmental Sciences, Organisms, Species diversity, Biology and Life Sciences, Species Diversity, Applied mathematics, Research and analysis methods, 030104 developmental biology, Physical Geography, Earth Sciences, Pyrosequencing, RNA, lcsh:Q, Species richness, Ribosomes, Mathematics
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09e23ebc8484abfe6852f6fe78c47465Test
http://hdl.handle.net/10261/135306Test -
9
المؤلفون: Zhijian Yue, Yanan Li, Weijie Min, Xiulong Li, Lei Zhang, Guosheng Han, Dandan Zhang, Dongwei Dai, Chao Chen, Yuhui Zhang, Jiaqi Wang
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 9, p e0160451 (2016)مصطلحات موضوعية: 0301 basic medicine, Oncology, Microarray, Microarrays, lcsh:Medicine, Bioinformatics, Biochemistry, Diagnostic Radiology, Software-aided sequence analysis, Prostate cancer, 0302 clinical medicine, Medicine and Health Sciences, lcsh:Science, Neurological Tumors, Multidisciplinary, Messenger RNA, Radiology and Imaging, Database and informatics methods, Glioma, Magnetic Resonance Imaging, Long non-coding RNA, Simulation and modeling, Nucleic acids, Physical sciences, Bioassays and Physiological Analysis, Neurology, 030220 oncology & carcinogenesis, Biomarker (medicine), Algorithms, Research Article, medicine.medical_specialty, Imaging Techniques, Biology, Research and Analysis Methods, 03 medical and health sciences, Diagnostic Medicine, Internal medicine, microRNA, medicine, Cancer Detection and Diagnosis, Non-coding RNA, BLAST algorithm, Receiver operating characteristic, Biology and life sciences, lcsh:R, Cancer, Cancers and Neoplasms, medicine.disease, Applied mathematics, 030104 developmental biology, Long non-coding RNAs, RNA, lcsh:Q, Biomarkers, Mathematics
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4b7bffd18dacd8faa7b5c2c9169351ccTest
https://pubmed.ncbi.nlm.nih.gov/27673330Test -
10
المؤلفون: Jishou Ruan, Wei Cui, Lukasz Kurgan, Yajun Sheng, Jianzhao Gao
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 4, p e0152964 (2016)مصطلحات موضوعية: 0301 basic medicine, Voltage-Gated Ion Channels, Models, Molecular, Potassium Channels, Computer science, Physiology, lcsh:Medicine, Protein Structure Prediction, Bioinformatics, Biochemistry, Physical Chemistry, Ion Channels, Software-aided sequence analysis, Mathematical and Statistical Techniques, Databases, Genetic, Medicine and Health Sciences, Macromolecular Structure Analysis, Limit (mathematics), lcsh:Science, Peptide sequence, Protein secondary structure, Sequence, Multidisciplinary, Physics, Database and informatics methods, Protein structure prediction, Potassium channel, Simulation and modeling, Electrophysiology, Identification (information), Chemistry, Physical Sciences, Ligand-gated ion channel, Algorithms, Statistics (Mathematics), Research Article, Anions, Protein Structure, Biophysics, Neurophysiology, 03 medical and health sciences, Similarity (network science), Amino Acid Sequence, Statistical Methods, Molecular Biology, Ion channel, BLAST algorithm, Ions, Voltage-gated ion channel, business.industry, lcsh:R, Biology and Life Sciences, Proteins, Computational Biology, Reproducibility of Results, Pattern recognition, Ligand-Gated Ion Channels, Applied mathematics, Support vector machine, Research and analysis methods, 030104 developmental biology, Membrane protein, lcsh:Q, Artificial intelligence, business, Mathematics, Software, Neuroscience, Forecasting
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cf7dddca695d1301dbf012dc7c7c1b65Test
http://europepmc.org/articles/PMC4820270Test
