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1دورية أكاديمية
المؤلفون: Ciura, Piotr, Smardz, Pamela, Spodzieja, Marta, Sieradzan, Adam K., Krupa, Pawel
المساهمون: Narodowe Centrum Nauki
المصدر: The Journal of Physical Chemistry B ; ISSN 1520-6106 1520-5207
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2دورية أكاديمية
المؤلفون: Bojko, Magdalena, Węgrzyn, Katarzyna, Sikorska, Emilia, Ciura, Piotr, Battin, Claire, Steinberger, Peter, Magiera-Mularz, Katarzyna, Dubin, Grzegorz, Kulesza, Adam, Sieradzan, Adam K., Spodzieja, Marta, Rodziewicz-Motowidło, Sylwia
المساهمون: Narodowe Centrum Nauki, Polpharma Scientific Foundation
المصدر: Translational Oncology ; volume 42, page 101892 ; ISSN 1936-5233
مصطلحات موضوعية: Cancer Research, Oncology
الإتاحة: https://doi.org/10.1016/j.tranon.2024.101892Test
https://api.elsevier.com/content/article/PII:S1936523324000184?httpAccept=text/xmlTest
https://api.elsevier.com/content/article/PII:S1936523324000184?httpAccept=text/plainTest -
3دورية أكاديمية
المؤلفون: Ocetkiewicz, Krzysztof M., Czaplewski, Cezary, Krawczyk, Henryk, Lipska, Agnieszka G., Liwo, Adam, Proficz, Jerzy, Sieradzan, Adam K., Czarnul, Paweł
المساهمون: Narodowe Centrum Nauki
المصدر: Computer Physics Communications ; volume 298, page 109112 ; ISSN 0010-4655
مصطلحات موضوعية: General Physics and Astronomy, Hardware and Architecture
الإتاحة: https://doi.org/10.1016/j.cpc.2024.109112Test
https://api.elsevier.com/content/article/PII:S0010465524000353?httpAccept=text/xmlTest
https://api.elsevier.com/content/article/PII:S0010465524000353?httpAccept=text/plainTest -
4دورية أكاديمية
المؤلفون: Fajardo, J Eduardo, Shrestha, Rojan, Gil, Nelson, Belsom, Adam, Crivelli, Silvia N, Czaplewski, Cezary, Fidelis, Krzysztof, Grudinin, Sergei, Karasikov, Mikhail, Karczyńska, Agnieszka S, Kryshtafovych, Andriy, Leitner, Alexander, Liwo, Adam, Lubecka, Emilia A, Monastyrskyy, Bohdan, Pagès, Guillaume, Rappsilber, Juri, Sieradzan, Adam K, Sikorska, Celina, Trabjerg, Esben, Fiser, Andras
المصدر: Proteins Structure Function and Bioinformatics. 87(12)
مصطلحات موضوعية: Biochemistry and Cell Biology, Bioinformatics and Computational Biology, Biological Sciences, Algorithms, Chromatography, Liquid, Computational Biology, Cross-Linking Reagents, Models, Chemical, Models, Molecular, Protein Conformation, Proteins, Reproducibility of Results, Tandem Mass Spectrometry, CASP13, chemical crosslinking, mass spectrometry, chemical-crosslink-assisted protein structure modeling, chemical crosslinking/mass spectrometry, Mathematical Sciences, Information and Computing Sciences, Bioinformatics, Biological sciences, Mathematical sciences
وصف الملف: application/pdf
الوصول الحر: https://escholarship.org/uc/item/5d30d308Test
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5دورية أكاديمية
المؤلفون: Lensink, Marc F., Brysbaert, Guillaume, Raouraoua, Nessim, Bates, Paul A., Giulini, Marco, Honorato, Rodrigo V., van Noort, Charlotte, Teixeira, Joao M. C., Bonvin, Alexandre M. J. J., Kong, Ren, Shi, Hang, Lu, Xufeng, Chang, Shan, Liu, Jian, Guo, Zhiye, Chen, Xiao, Morehead, Alex, Roy, Raj S., Wu, Tianqi, Giri, Nabin, Quadir, Farhan, Chen, Chen, Cheng, Jianlin, Del Carpio, Carlos A., Ichiishi, Eichiro, Rodriguez-Lumbreras, Luis A., Fernandez-Recio, Juan, Harmalkar, Ameya, Chu, Lee-Shin, Canner, Sam, Smanta, Rituparna, Gray, Jeffrey J., Li, Hao, Lin, Peicong, He, Jiahua, Tao, Huanyu, Huang, Sheng-You, Roel-Touris, Jorge, Jimenez-Garcia, Brian, Christoffer, Charles W., Jain, Anika J., Kagaya, Yuki, Kannan, Harini, Nakamura, Tsukasa, Terashi, Genki, Verburgt, Jacob C., Zhang, Yuanyuan, Zhang, Zicong, Fujuta, Hayato, Sekijima, Masakazu, Kihara, Daisuke, Khan, Omeir, Kotelnikov, Sergei, Ghani, Usman, Padhorny, Dzmitry, Beglov, Dmitri, Vajda, Sandor, Kozakov, Dima, Negi, Surendra S., Ricciardelli, Tiziana, Barradas-Bautista, Didier, Cao, Zhen, Chawla, Mohit, Cavallo, Luigi, Oliva, Romina, Yin, Rui, Cheung, Melyssa, Guest, Johnathan D., Lee, Jessica, Pierce, Brian G., Shor, Ben, Cohen, Tomer, Halfon, Matan, Schneidman-Duhovny, Dina, Zhu, Shaowen, Yin, Rujie, Sun, Yuanfei, Shen, Yang, Maszota-Zieleniak, Martyna, Bojarski, Krzysztof K., Lubecka, Emilia A., Marcisz, Mateusz, Danielsson, Annemarie, Dziadek, Lukasz, Gaardlos, Margrethe, Gieldon, Artur, Liwo, Adam, Samsonov, Sergey A., Slusarz, Rafal, Zieba, Karolina, Sieradzan, Adam K., Czaplewski, Cezary, Kobayashi, Shinpei, Miyakawa, Yuta, Kiyota, Yasuomi, Takeda-Shitaka, Mayuko, Olechnovič, Kliment, Valančauskas, Lukas, Dapkūnas, Justas, Venclovas, Česlovas, Wallner, Bjorn, Yang, Lin, Hou, Chengyu, He, Xiaodong, Guo, Shuai, Jiang, Shenda, Ma, Xiaoliang, Duan, Rui, Qui, Liming, Xu, Xianjin, Zou, Xiaoqin, Velankar, Sameer, Wodak, Shoshana J.
المصدر: Proteins: structure, function and bioinformatics: Special Issue: CASP15: Critical Assessment of methods for Structure Prediction, 15th round., Hoboken : John Wiley and Sons Inc, 2023, vol. 91, iss. 12, p. 1658-1683. ; ISSN 0887-3585 ; eISSN 1097-0134
مصطلحات موضوعية: AlphaFold, blind prediction, CAPRI, CASP, deep learning, protein assemblies, protein complexes, protein-protein interaction
وصف الملف: application/pdf
العلاقة: https://epublications.vu.lt/object/elaba:181802571/181802571.pdfTest; https://repository.vu.lt/VU:ELABAPDB181802571&prefLang=en_USTest
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6دورية أكاديمية
المؤلفون: Lensink, Marc, Brysbaert, Guillaume, Raouraoua, Nessim, Bates, Paul A., Giulini, Marco, Honorato, Rodrigo V., van Noort, Charlotte, Teixeira, Joao M. C., Bonvin, Alexandre M. J. J., Kong, Ren, Shi, Hang, Lu, Xufeng, Chang, Shan, Liu, Jian, Guo, Zhiye, Chen, Xiao, Morehead, Alex, Roy, Raj S., Wu, Tianqi, Giri, Nabin, Quadir, Farhan, Chen, Chen, Cheng, Jianlin, del Carpio, Carlos A., Ichiishi, Eichiro, Rodriguez‐lumbreras, Luis A., Fernandez‐recio, Juan, Harmalkar, Ameya, Chu, Lee‐shin, Canner, Sam, Smanta, Rituparna, Gray, Jeffrey J., Li, Hao, Lin, Peicong, He, Jiahua, Tao, Huanyu, Huang, Sheng‐you, Roel‐touris, Jorge, Jimenez‐garcia, Brian, Christoffer, Charles W., Jain, Anika J., Kagaya, Yuki, Kannan, Harini, Nakamura, Tsukasa, Terashi, Genki, Verburgt, Jacob C., Zhang, Yuanyuan, Zhang, Zicong, Fujuta, Hayato, Sekijima, Masakazu, Kihara, Daisuke, Khan, Omeir, Kotelnikov, Sergei, Ghani, Usman, Padhorny, Dzmitry, Beglov, Dmitri, Vajda, Sandor, Kozakov, Dima, Negi, Surendra S., Ricciardelli, Tiziana, Barradas‐bautista, Didier, Cao, Zhen, Chawla, Mohit, Cavallo, Luigi, Oliva, Romina, Yin, Rui, Cheung, Melyssa, Guest, Johnathan D., Lee, Jessica, Pierce, Brian G., Shor, Ben, Cohen, Tomer, Halfon, Matan, Schneidman‐duhovny, Dina, Zhu, Shaowen, Yin, Rujie, Sun, Yuanfei, Shen, Yang, Maszota‐zieleniak, Martyna, Bojarski, Krzysztof K., Lubecka, Emilia A., Marcisz, Mateusz, Danielsson, Annemarie, Dziadek, Lukasz, Gaardlos, Margrethe, Gieldon, Artur, Liwo, Adam, Samsonov, Sergey A., Slusarz, Rafal, Zieba, Karolina, Sieradzan, Adam K., Czaplewski, Cezary, Kobayashi, Shinpei, Miyakawa, Yuta, Kiyota, Yasuomi, Takeda‐shitaka, Mayuko, Olechnovic, Kliment, Valancauskas, Lukas, Dapkunas, Justas, Venclovas, Ceslovas, Wallner, Bjorn, Yang, Lin, Hou, Chengyu, He, Xiaodong, Guo, Shuai, Jiang, Shenda, Ma, Xiaoliang, Duan, Rui, Qui, Liming, Xu, Xianjin, Zou, Xiaoqin, Velankar, Sameer, Wodak, Shoshana J.
المساهمون: Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 (UGSF), Université de Lille-Centre National de la Recherche Scientifique (CNRS), Biomolecular Modelling laboratory London, Cancer Research UK London Research Institute, Bijvoet Center for Biomolecular Research Utrecht, Universiteit Utrecht / Utrecht University Utrecht, Jiangsu University of Technology Changzhou, Department of Electrical Engineering and Computer Science Columbia (EECS), University of Missouri Columbia (Mizzou), University of Missouri System-University of Missouri System, International University of Health and Welfare Hospital (IUHW Hospital), Barcelona Supercomputing Center - Centro Nacional de Supercomputacion (BSC-CNS), Instituto de Ciencias de la Vid y el Vino (ICVV), Universidad de La Rioja (UR)-Consejo Superior de Investigaciones Científicas Spain (CSIC), Johns Hopkins University (JHU), Program in Molecular Biophysics Baltimore, Huazhong University of Science and Technology Wuhan (HUST), Department of Computer Science Purdue, Purdue University West Lafayette, Department of Biological Sciences West Lafayette, Indian Institute of Technology Madras (IIT Madras), Tokyo Institute of Technology Tokyo (TITECH), Boston University Boston (BU), Stony Brook University SUNY (SBU), State University of New York (SUNY), The University of Texas Medical Branch (UTMB), King Abdullah University of Science and Technology Saudi Arabia (KAUST), Università degli Studi di Salerno = University of Salerno (UNISA), Università degli Studi di Napoli “Parthenope” = University of Naples (PARTHENOPE), University of Maryland College Park, University of Maryland System, The Hebrew University of Jerusalem (HUJ), Texas A&M University College Station, Kitasato University, Institute of Biotechnology Vilnius, Life Science Center Vilnius, Vilnius University Vilnius -Vilnius University Vilnius, Linköping University (LIU), The University of Sydney, Harbin Institute of Technology (HIT), University of Missouri System, European Bioinformatics Institute Hinxton (EMBL-EBI), EMBL Heidelberg, VIB-VUB Center for Structural Biology Bruxelles, VIB Belgium, BioExcel Centre of Excellence for ComputationalBiomolecular Research, Cancer Research UK. Grant Number: FC0001003, UK Medical Research Council. Grant Number: FC001003, Marie Skłodowska-Curie. Grant Number: 801342, Government of Catalonia's Agency for Business Competitiveness (ACCIO), National Science Foundation. Grant Numbers: DMS 2054251, DBI2003635, IIS2211598, DBI2146026, MCB1925643, CMMI1825941, IIS1763246, DBI1759934, CCF-1943008, OAC1920103, National Institute of General Medical Sciences. Grant Number: T32 GM132024, NIH/NIGMS. Grant Numbers: R35GM136409, R35GM124952, Research Council of Lithuania. Grant Number: S-MIP-21-25, Wallenberg AI, Autonomous System and Software Program (WASP), Knut and Alice Wallenberg Foundation (KAW), Swedish Research Council, Science Foundation of the National Key Laboratory of Science and Technology, Wellcome Trust. Grant Number: FC001003, Netherlands e-Science Center. Grant Number: 027.020.G13, US National Institutes of Health. Grant Numbers: R01GM146340, R01GM093123, Spanish Ministry of Science. Grant Numbers: 501100011033, AEI/10.13039, PID2019-110167RB-I00, National Institute of Health. Grant Numbers: R35 GM144083, RM1135136, R35GM118078, R01GM140098, R01GM123055, R01GM133840, R35-GM141881, Advanced Research Computing at Hopkins (ARCH) core facility, National Natural Science Foundation of China. Grant Numbers: 32161133002, 62072199, European Molecular Biology Organization (EMBO). Grant Number: ALTF 145-2021
المصدر: ISSN: 0887-3585.
مصطلحات موضوعية: AlphaFold, blind prediction, CAPRI, CASP, deep learning, protein assemblies, protein complexes, protein-protein interaction, [SDV]Life Sciences [q-bio], [CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry
العلاقة: hal-04279362; https://hal.univ-lille.fr/hal-04279362Test; https://hal.univ-lille.fr/hal-04279362/documentTest; https://hal.univ-lille.fr/hal-04279362/file/P23.38%20Lensink-capri-casp-2023.pdfTest
الإتاحة: https://doi.org/10.1002/prot.26609Test
https://hal.univ-lille.fr/hal-04279362Test
https://hal.univ-lille.fr/hal-04279362/documentTest
https://hal.univ-lille.fr/hal-04279362/file/P23.38%20Lensink-capri-casp-2023.pdfTest -
7دورية أكاديمية
المؤلفون: Borges-Araújo, Luís, Patmanidis, Ilias, Singh, Akhil P, Santos, Lucianna H S, Sieradzan, Adam K, Vanni, Stefano, Czaplewski, Cezary, Pantano, Sergio, Shinoda, Wataru, Monticelli, Luca, Liwo, Adam, Marrink, Siewert J, Souza, Paulo C T
المصدر: Borges-Araújo , L , Patmanidis , I , Singh , A P , Santos , L H S , Sieradzan , A K , Vanni , S , Czaplewski , C , Pantano , S , Shinoda , W , Monticelli , L , Liwo , A , Marrink , S J & Souza , P C T 2023 , ' Pragmatic Coarse-Graining of Proteins : Models and Applications ' , Journal of Chemical Theory and Computation , vol. 19 , no. 20 , e00733 , pp. 7112-7135 . https://doi.org/10.1021/acs.jctc.3c00733Test
وصف الملف: application/pdf
الإتاحة: https://doi.org/10.1021/acs.jctc.3c00733Test
https://hdl.handle.net/11370/0b4eee71-5719-4380-b84e-df5e152ca6dbTest
https://research.rug.nl/en/publications/0b4eee71-5719-4380-b84e-df5e152ca6dbTest
https://pure.rug.nl/ws/files/855973372/borges-ara_jo-et-al-2023-pragmatic-coarse-graining-of-proteins-models-and-applications.pdfTest -
8دورية أكاديمية
المؤلفون: Wesołowski, Patryk A, Sieradzan, Adam K, Winnicki, Michał J, Morgan, John WR, Wales, David J
مصطلحات موضوعية: Energy landscape, Potential energy surface, Proteins, UNRES coarse-grained model, Protein Conformation, Protein Structure, Secondary, Thermodynamics, Software, Molecular Dynamics Simulation
وصف الملف: application/pdf
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9دورية أكاديمية
المؤلفون: Ocetkiewicz, Krzysztof M, Czaplewski, Cezary, Krawczyk, Henryk, Lipska, Agnieszka G, Liwo, Adam, Proficz, Jerzy, Sieradzan, Adam K, Czarnul, Paweł
المساهمون: Elofsson, Arne, National Science Centre
المصدر: Bioinformatics ; volume 39, issue 6 ; ISSN 1367-4811
الإتاحة: https://doi.org/10.1093/bioinformatics/btad391Test
https://academic.oup.com/bioinformatics/article-pdf/39/6/btad391/50738091/btad391.pdfTest -
10دورية أكاديمية
المؤلفون: Lensink, Marc F, Brysbaert, Guillaume, Raouraoua, Nessim, Bates, Paul A, Giulini, Marco, Honorato, Rodrigo V, van Noort, Charlotte, Teixeira, Joao M C, Bonvin, Alexandre M J J, Kong, Ren, Shi, Hang, Lu, Xufeng, Chang, Shan, Liu, Jian, Guo, Zhiye, Chen, Xiao, Morehead, Alex, Roy, Raj S, Wu, Tianqi, Giri, Nabin, Quadir, Farhan, Chen, Chen, Cheng, Jianlin, Del Carpio, Carlos A, Ichiishi, Eichiro, Rodriguez-Lumbreras, Luis A, Fernandez-Recio, Juan, Harmalkar, Ameya, Chu, Lee-Shin, Canner, Sam, Smanta, Rituparna, Gray, Jeffrey J, Li, Hao, Lin, Peicong, He, Jiahua, Tao, Huanyu, Huang, Sheng-You, Roel-Touris, Jorge, Jimenez-Garcia, Brian, Christoffer, Charles W, Jain, Anika J, Kagaya, Yuki, Kannan, Harini, Nakamura, Tsukasa, Terashi, Genki, Verburgt, Jacob C, Zhang, Yuanyuan, Zhang, Zicong, Fujuta, Hayato, Sekijima, Masakazu, Kihara, Daisuke, Khan, Omeir, Kotelnikov, Sergei, Ghani, Usman, Padhorny, Dzmitry, Beglov, Dmitri, Vajda, Sandor, Kozakov, Dima, Negi, Surendra S, Ricciardelli, Tiziana, Barradas-Bautista, Didier, Cao, Zhen, Chawla, Mohit, Cavallo, Luigi, Oliva, Romina, Yin, Rujie, Cheung, Melyssa, Guest, Johnathan D, Lee, Jessica, Pierce, Brian G, Shor, Ben, Cohen, Tomer, Halfon, Matan, Schneidman-Duhovny, Dina, Zhu, Shaowen, Sun, Yuanfei, Shen, Yang, Maszota-Zieleniak, Martyna, Bojarski, Krzysztof K, Lubecka, Emilia A, Marcisz, Mateusz, Danielsson, Annemarie, Dziadek, Lukasz, Gaardlos, Margrethe, Gieldon, Artur, Liwo, Adam, Samsonov, Sergey A, Slusarz, Rafal, Zieba, Karolina, Sieradzan, Adam K, Czaplewski, Cezary, Kobayashi, Shinpei, Miyakawa, Yuta, Kiyota, Yasuomi, Takeda-Shitaka, Mayuko, Olechnovic, Kliment, Valancauskas, Lukas, Dapkunas, Justas, Venclovas, Ceslovas, Wallner, Bjorn, Yang, Lin, Hou, Chengyu, He, Xiaodong, Guo, Shuai, Jiang, Shenda, Ma, Xiaoliang, Duan, Rui, Qui, Liming, Xu, Xianjin, Zou, Xiaoqin, Velankar, Sameer, Wodak, Shoshana J
المساهمون: Sub NMR Spectroscopy, NMR Spectroscopy
مصطلحات موضوعية: AlphaFold, CAPRI, CASP, blind prediction, deep learning, protein assemblies, protein complexes, protein-protein interaction, Molecular Biology, Structural Biology, Biochemistry
وصف الملف: application/pdf