المؤلفون: Mund, Andreas, Coscia, Fabian, Kriston, Andras, Hollandi, Reka, Kovacs, Ferenc, Brunner, Andreas-David, Migh, Ede, Schweizer, Lisa, Santos, Alberto, Bzorek, Michael, Naimy, Soraya, Rahbek-Gjerdrum, Lise Mette, Dyring-Andersen, Beatrice, Bulkescher, Jutta, Lukas, Claudia, Eckert, Mark Adam, Lengyel, Ernst, Gnann, Christian, Lundberg, Emma, Horvath, Peter, Mann, Matthias

المساهمون: Institute for Molecular Medicine Finland

مصطلحات موضوعية: Extraction, Melanoma, Mutations, Nucleus segmentation, Package, Peptide identification, 3111 Biomedicine

وصف الملف: application/pdf

العلاقة: The authors thank M. Ryk ae r, J. Madsen (NNF CPR Mass Spectrometry Platform, University of Copenhagen) and L. Drici (NNF CPR Proteomics Program) as well as J. Mueller (MPIB Munich) for technical assistance. We acknowledge F. Hoffmann, C. Greb and F. Schlaudraff from Leica for technical support; T. Danka and M. Kovacs for fruitful scientific discussions; and T. Hartig Braunstein, P. Hernandez-Varas and C. Prats from the Core Facility of Integrated Microscopy for microscopy support. We thank J. Lukas for scientific support and guidance and J. Percival for the scientific illustrations (Illustration Ltd.). This work was supported by grants from the Novo Nordisk Foundation (grant agreements NNF14CC0001 and NNF15CC0001) and the Max Planck Society for the Advancement of Science and by the Chan Zuckerberg Initiative for partial funding of the cell cycle work (grant CZF2019-002448) to E. Lundberg, M.M. and P.H. F.C. acknowledges the European Union's Horizon 2020 Research and Innovation Programme under grant agreement 846795 (Marie Skodowska-Curie grant) and the German Ministry of Education and Research (BMBF), as part of the National Research Node 'Mass Spectrometry in Systems Medicine' (MSCoreSys), under grant agreement 161L0222. B.D.A. acknowledges support from the Lundbeck Foundation (R252-2017-1414) and the Novo Nordisk Foundation (NNF20OC0065720). P.H., R.H., F.K., E.M. and A.K. acknowledge support from the LENDULET-BIOMAG Grant (2018-342), European Regional Development Funds (GINOP-2.2.1-15-2017-00072), H2020 (ERAPERMED-COMPASS, ERAPERMED-SYMMETRY, DiscovAIR, FAIR-CHARM), OTKA-SNN, TKP2021-EGA09 and ELKH-Excellence grants. E. Lengyel is supported by NIH R35CA264619 and the Chan Zuckerberg Initiative (CZIF2019-002435). We acknowledge S. Ito and H. Masai (Tokyo Metropolitan Institute of Medical Science) for providing the stable U2OS FUCCI cell line. The LCK-GFP plasmid was a gift from S. Green (Addgene, plasmid 61099).; Mund , A , Coscia , F , Kriston , A , Hollandi , R , Kovacs , F , Brunner , A-D , Migh , E , Schweizer , L , Santos , A , Bzorek , M , Naimy , S , Rahbek-Gjerdrum , L M , Dyring-Andersen , B , Bulkescher , J , Lukas , C , Eckert , M A , Lengyel , E , Gnann , C , Lundberg , E , Horvath , P & Mann , M 2022 , ' Deep Visual Proteomics defines single-cell identity and heterogeneity ' , Nature Biotechnology , vol. 40 , no. 8 , pp. 1231–1240 . https://doi.org/10.1038/s41587-022-01302-5Test; 85130484429; e4d67b5c-8197-480f-9696-3ab7ecb6c143; http://hdl.handle.net/10138/354951Test; 000798052500002

الإتاحة: http://hdl.handle.net/10138/354951Test

المؤلفون: Schweizer, Lisa, Schaller, Tina, Zwiebel, Maximilian, Karayel, Özge, Müller‐Reif, Johannes Bruno, Zeng, Wen‐Feng, Dintner, Sebastian, Nordmann, Thierry M., Hirschbühl, Klaus, Märkl, Bruno, Claus, Rainer, Mann, Matthias

مصطلحات موضوعية: ddc:610

وصف الملف: application/pdf

العلاقة: https://opus.bibliothek.uni-augsburg.de/opus4/frontdoor/index/index/docId/107394Test; urn:nbn:de:bvb:384-opus4-1073946; https://nbn-resolving.org/urn:nbn:de:bvb:384-opus4-1073946Test; https://doi.org/10.15252/emmm.202317459Test; https://opus.bibliothek.uni-augsburg.de/opus4/files/107394/EMBO%20Mol%20Med%20-%202023%20-%20Schweizer.pdfTest

الإتاحة: https://doi.org/10.15252/emmm.202317459Test
https://opus.bibliothek.uni-augsburg.de/opus4/frontdoor/index/index/docId/107394Test
https://nbn-resolving.org/urn:nbn:de:bvb:384-opus4-1073946Test
https://opus.bibliothek.uni-augsburg.de/opus4/files/107394/EMBO%20Mol%20Med%20-%202023%20-%20Schweizer.pdfTest

المؤلفون: Thienel, Manuela, Müller-Reif, Johannes B., Zhang, Zhe, Ehreiser, Vincent, Huth, Judith, Shchurovska, Khrystyna, Kilani, Badr, Schweizer, Lisa, Geyer, Philipp E., Zwiebel, Maximilian, Novotny, Julia, Lüsebrink, Enzo, Little, Gemma, Orban, Martin, Nicolai, Leo, El Nemr, Shaza, Titova, Anna, Spannagl, Michael, Kindberg, Jonas, Evans, Alina L., Mach, Orpheus, Vogel, Matthias, Tiedt, Steffen, Ormanns, Steffen, Kessler, Barbara, Dueck, Anne, Friebe, Andrea, Jørgensen, Peter Godsk, Majzoub-Altweck, Monir, Blutke, Andreas, Polzin, Amin, Stark, Konstantin, Kääb, Stefan, Maier, Doris, Gibbins, Jonathan M., Limper, Ulrich, Frobert, Ole, Mann, Matthias, Massberg, Steffen, Petzold, Tobias

المصدر: Thienel , M , Müller-Reif , J B , Zhang , Z , Ehreiser , V , Huth , J , Shchurovska , K , Kilani , B , Schweizer , L , Geyer , P E , Zwiebel , M , Novotny , J , Lüsebrink , E , Little , G , Orban , M , Nicolai , L , El Nemr , S , Titova , A , Spannagl , M , Kindberg , J , Evans , A L , Mach , O , Vogel , M , Tiedt , S , Ormanns , S ....

العلاقة: https://pure.au.dk/portal/en/publications/0e570ef2-33f6-4aed-a159-fc19393ce14bTest

الإتاحة: https://doi.org/10.1126/science.abo5044Test
https://pure.au.dk/portal/en/publications/0e570ef2-33f6-4aed-a159-fc19393ce14bTest
http://www.scopus.com/inward/record.url?scp=85152454110&partnerID=8YFLogxKTest

المؤلفون: Nordmann, Thierry M., Schweizer, Lisa, Metousis, Andreas, Thielert, Marvin, Rodriguez, Edwin, Rahbek-Gjerdrum, Lise Mette, Stadler, Pia-Charlotte, Bzorek, Michael, Mund, Andreas, Rosenberger, Florian A., Mann, Matthias

المصدر: Nordmann , T M , Schweizer , L , Metousis , A , Thielert , M , Rodriguez , E , Rahbek-Gjerdrum , L M , Stadler , P-C , Bzorek , M , Mund , A , Rosenberger , F A & Mann , M 2023 , ' A Standardized and Reproducible Workflow for Membrane Glass Slides in Routine Histology and Spatial Proteomics ' , Molecular & cellular proteomics : MCP , vol. 22 , no. 10 , 100643 . https://doi.org/10.1016/j.mcpro.2023.100643Test

وصف الملف: application/pdf

الإتاحة: https://doi.org/10.1016/j.mcpro.2023.100643Test
https://curis.ku.dk/portal/da/publications/a-standardized-and-reproducible-workflow-for-membrane-glass-slides-in-routine-histology-and-spatial-proteomicsTest(0014af55-fa19-46c7-b786-43cf1a2f3ce6).html
https://curis.ku.dk/ws/files/378939476/1_s2.0_S1535947623001548_main.pdfTest

المؤلفون: Rosenberger, Florian A., Thielert, Marvin, Strauss, Maximilian T., Schweizer, Lisa, Ammar, Constantin, Mädler, Sophia C., Metousis, Andreas, Skowronek, Patricia, Wahle, Maria, Madden, Katherine, Gote-Schniering, Janine, Semenova, Anna, Schiller, Herbert B., Rodriguez, Edwin, Nordmann, Thierry M., Mund, Andreas, Mann, Matthias

المصدر: Rosenberger , F A , Thielert , M , Strauss , M T , Schweizer , L , Ammar , C , Mädler , S C , Metousis , A , Skowronek , P , Wahle , M , Madden , K , Gote-Schniering , J , Semenova , A , Schiller , H B , Rodriguez , E , Nordmann , T M , Mund , A & Mann , M 2023 , ' Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome ' , Nature Methods , vol. 20 , no. 10 , pp. 1530-1536 . ....

وصف الملف: application/pdf

الإتاحة: https://doi.org/10.1038/s41592-023-02007-6Test
https://curis.ku.dk/portal/da/publications/spatial-singlecell-mass-spectrometry-defines-zonation-of-the-hepatocyte-proteomeTest(f0e7e5f5-39cf-4b45-a856-89d2e46be602).html
https://curis.ku.dk/ws/files/370119506/s41592_023_02007_6.pdfTest

المؤلفون: Thielert, Marvin, Itang, Ericka C.M., Ammar, Constantin, Rosenberger, Florian A., Bludau, Isabell, Schweizer, Lisa, Nordmann, Thierry M., Skowronek, Patricia, Wahle, Maria, Zeng, Wen Feng, Zhou, Xie Xuan, Brunner, Andreas David, Richter, Sabrina, Levesque, Mitchell P., Theis, Fabian J., Steger, Martin, Mann, Matthias

المصدر: Thielert , M , Itang , E C M , Ammar , C , Rosenberger , F A , Bludau , I , Schweizer , L , Nordmann , T M , Skowronek , P , Wahle , M , Zeng , W F , Zhou , X X , Brunner , A D , Richter , S , Levesque , M P , Theis , F J , Steger , M & Mann , M 2023 , ' Robust dimethyl-based multiplex-DIA doubles single-cell proteome depth via a reference channel ' , Molecular Systems Biology , vol. 19 , ....

مصطلحات موضوعية: DIA, dimethyl labeling, multiplexing, single cells, spatial proteomics

وصف الملف: application/pdf

الإتاحة: https://doi.org/10.15252/msb.202211503Test
https://curis.ku.dk/portal/da/publications/robust-dimethylbased-multiplexdia-doubles-singlecell-proteome-depth-via-a-reference-channelTest(5fe3a36c-ffb6-4c07-a789-6a1022d2917d).html
https://curis.ku.dk/ws/files/380155826/thielert_et_al_2023_robust_dimethyl_based_multiplex_dia_doubles_single_cell_proteome_depth_via_a_reference_channel.pdfTest

المؤلفون: Kardell, Oliver, von Toerne, Christine, Merl-Pham, Juliane, König, Ann-Christine, Blindert, Marcel, Barth, Teresa K., Mergner, Julia, Ludwig, Christina, Tüshaus, Johanna, Eckert, Stephan, Müller, Stephan A., Breimann, Stephan, Giesbertz, Pieter, Bernhardt, Alexander M., Schweizer, Lisa, Albrecht, Vincent, Teupser, Daniel, Imhof, Axel, Kuster, Bernhard, Lichtenthaler, Stefan F., Mann, Matthias, Cox, Jürgen, Hauck, Stefanie M.

المساهمون: Bundesministerium f?r Bildung und Forschung, Deutsche Forschungsgemeinschaft

المصدر: Journal of Proteome Research ; volume 23, issue 1, page 117-129 ; ISSN 1535-3893 1535-3907

مصطلحات موضوعية: General Chemistry, Biochemistry

الإتاحة: https://doi.org/10.1021/acs.jproteome.3c00473Test

المؤلفون: Doll, Sophia, Schweizer, Lisa, Bollwein, Christine, Steiger, Katja, Pfarr, Nicole, Walker, Maria, Wörtler, Klaus, Knebel, Carolin, von Eisenhart-Rothe, Ruediger, Hartmann, Wolfgang, Weichert, Wilko, Mann, Matthias, Kuhn, Peer-Hendrik, Specht, Katja

المساهمون: Institut für Diagnostische und Interventionelle Radiologie (Prof. Makowski)

مصطلحات موضوعية: info:eu-repo/classification/ddc

العلاقة: https://mediatum.ub.tum.de/1743985Test

الإتاحة: https://doi.org/10.1016/j.modpat.2024.100511Test
https://mediatum.ub.tum.de/1743985Test

المؤلفون: Schaller, Tina, Märkl, Bruno, Claus, Rainer, Sholl, Lynette, Hornick, Jason L., Giannetti, Matthew P., Schweizer, Lisa, Mann, Matthias, Castells, Mariana

مصطلحات موضوعية: ddc:610

وصف الملف: application/pdf

العلاقة: https://opus.bibliothek.uni-augsburg.de/opus4/frontdoor/index/index/docId/94600Test; urn:nbn:de:bvb:384-opus4-946002; https://nbn-resolving.org/urn:nbn:de:bvb:384-opus4-946002Test; https://doi.org/10.1111/all.15293Test; https://opus.bibliothek.uni-augsburg.de/opus4/files/94600/Allergy%20-%202022%20-%20Schaller%20-%20Mast%20cells%20in%20lung%20damage%20of%20COVID_E2_80_9019%20autopsies%20A%20descriptive%20study.pdfTest

الإتاحة: https://doi.org/10.1111/all.15293Test
https://opus.bibliothek.uni-augsburg.de/opus4/frontdoor/index/index/docId/94600Test
https://nbn-resolving.org/urn:nbn:de:bvb:384-opus4-946002Test
https://opus.bibliothek.uni-augsburg.de/opus4/files/94600/Allergy%20-%202022%20-%20Schaller%20-%20Mast%20cells%20in%20lung%20damage%20of%20COVID_E2_80_9019%20autopsies%20A%20descriptive%20study.pdfTest

المؤلفون: Mund, Andreas, Coscia, Fabian, Kriston, András, Hollandi, Réka, Kovács, Ferenc, Brunner, Andreas-David, Migh, Ede, Schweizer, Lisa, Santos, Alberto, Bzorek, Michael, Naimy, Soraya, Rahbek-Gjerdrum, Lise Mette, Dyring-Andersen, Beatrice, Bulkescher, Jutta, Lukas, Claudia, Eckert, Mark Adam, Lengyel, Ernst, Gnann, Christian, Lundberg, Emma, Horvath, Peter, Mann, Matthias

المصدر: Mund , A , Coscia , F , Kriston , A , Hollandi , R , Kovács , F , Brunner , A-D , Migh , E , Schweizer , L , Santos , A , Bzorek , M , Naimy , S , Rahbek-Gjerdrum , L M , Dyring-Andersen , B , Bulkescher , J , Lukas , C , Eckert , M A , Lengyel , E , Gnann , C , Lundberg , E , Horvath , P & Mann , M 2022 , ' Deep Visual Proteomics defines single-cell identity and heterogeneity ' , Nature ....

وصف الملف: application/pdf

الإتاحة: https://doi.org/10.1038/s41587-022-01302-5Test
https://curis.ku.dk/portal/da/publications/deep-visual-proteomics-defines-singlecell-identity-and-heterogeneityTest(72fa4506-a571-4270-874b-46207187448f).html
https://curis.ku.dk/ws/files/320876948/s41587_022_01302_5.pdfTest