المؤلفون: Popin, Rafael Vicentini

مرشدي الرسالة: Fiore, Marli de Fatima

مصطلحات موضوعية: Agrupamento gênico, Cianotoxinas, Comparative genomics, Cyanotoxins, Espectrometria de massas, Gene cluster, Genoma, Genome, Genômica comparativa, Mass spectrometry

وصف الملف: application/pdf

الإتاحة: http://www.teses.usp.br/teses/disponiveis/64/64133/tde-18102017-082750Test/

المؤلفون: Machado, Maurício Jr, Botero, Natalia Betancurt, Andreote, Ana Paula Dini, Feitosa, Anderson Miguel Teixeira, Popin, Rafael Vicentini, Sivonen, Kaarina, Fiore, Marli F.

المصدر: Machado , M J , Botero , N B , Andreote , A P D , Feitosa , A M T , Popin , R V , Sivonen , K & Fiore , M F 2024 , ' Genomic Insights into the Taxonomy and Metabolism of the Cyanobacterium Pannus brasiliensis CCIBt3594 ' , Taxonomy , vol. 4 , no. 1 , 1 , pp. 184-198 . https://doi.org/10.3390/taxonomy4010010Test

الإتاحة: https://doi.org/10.3390/taxonomy4010010Test
https://curis.ku.dk/portal/da/publications/genomic-insights-into-the-taxonomy-and-metabolism-of-the-cyanobacterium-pannus-brasiliensis-ccibt3594Test(8296fc7b-e008-46d2-99aa-b4c67dbf6c50).html

المؤلفون: Pessi, Igor S, Popin, Rafael V, Durieu, Benoit, Lara, Yannick, Tytgat, Bjorn, Savaglia, Valentina, Roncero-Ramos, Beatriz, Hultman, Jenni, Verleyen, Elie, Vyverman, Wim, Wilmotte, Annick

المساهمون: InBios - Integrative Biological Sciences - ULiège

المصدر: Microbial Genomics, 9 (7), 001056 (2023-07)

مصطلحات موضوعية: Cyanobacteria, metagenomics, microbial mats, polar regions, Lakes/microbiology, Metagenome, Base Sequence, Metagenomics, Cyanobacteria/genetics, General Medicine, Life sciences, Environmental sciences & ecology, Biochemistry, biophysics & molecular biology, Microbiology, Sciences du vivant, Sciences de l’environnement & écologie, Biochimie, biophysique & biologie moléculaire, Microbiologie

العلاقة: https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001056?crawler=true&mimetype=application/pdfTest; Supplementary data; Supplementary data; https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001056#supplementary_dataTest; https://figshare.com/articles/dataset/Polar_cyanobacteria_MAGs/22003967Test; urn:issn:2057-5858

الوصول الحر: https://orbi.uliege.be/handle/2268/305708Test

المؤلفون: Pessi, Igor S., Popin, Rafael V., Durieu, Benoit, Lara, Yannick, Tytgat, Bjorn, Savaglia, Valentina, Roncero Ramos, Beatriz, Hultman, Jenni, Verleyen, Elie, Vyverman, Wim, Wilmotte, Annick

المساهمون: Universidad de Sevilla. Departamento de Biología Vegetal y Ecología, Belgian Federal Science Policy Office. Belgium, Belgian National Fund for Scientific Research. Belgium, Academy of Finland, Junta de Andalucía

مصطلحات موضوعية: Cyanobacteria, Metagenomics, Microbial mats, Polar regions

العلاقة: Microbial genomics, 9 (7).; AMBIO – SD/BA/01A; CCAMBIO – SD/BA/03A; PORTAL – B2/212/P1/PORTAL; 2.4570.09; CR.CH.10-11-1.5139.11; 1314114; PAIDI-DOCTOR 21_00571; https://doi.org/10.1099/mgen.0.001056Test; https://idus.us.es/handle//11441/148165Test

الإتاحة: https://doi.org/10.1099/mgen.0.001056Test
https://idus.us.es/handle//11441/148165Test

المؤلفون: Machado, Mauricio Junior, Botero, Natalia Betancurt, Andreote, Ana Paula Dini, Feitosa, Anderson Miguel Teixeira, Popin, Rafael Vicentini, Sivonen, Kaarina, Fiore, Marli F.

المصدر: Taxonomy; Mar2024, Vol. 4 Issue 1, p184-198, 15p

مصطلحات موضوعية: NITROGEN fixation, METABOLISM, MUCILAGE, PHYLA (Genus), CLADISTIC analysis, BIOSYNTHESIS, TAXONOMY

مصطلحات جغرافية: BRAZIL

المؤلفون: Clemente, Claudia, Johnson, Nicholas, Ouyang, Xiaodan, Popin, Rafael, Dall'Angelo, Sergio, Wahlsten, Matti, Jokela, Jouni, Colombano, Alessandro, Nardone, Brunello, Fewer, David P., Houssen, Wael E.

المساهمون: Institute of Biotechnology, Department of Food and Nutrition, Department of Microbiology, Faculty of Agriculture and Forestry, Cyanobacteria research, Helsinki Institute of Sustainability Science (HELSUS), Microbial Natural Products

مصطلحات موضوعية: DRUG DISCOVERY, CYCLIC PEPTIDE, MACROCYCLASE, HETEROCYCLIZATION, TRYPTOPHAN, PROTEINS, ENZYMES, ENABLES, Biochemistry, cell and molecular biology

وصف الملف: application/pdf

العلاقة: This project was supported by a fellowship grant from the EPSRC (No. EP/S027246/1, W.E.H.), a training grant from the BBSRC (BB/V509206/1, W. E. H. and S. D.), the Novo Nordisk Foundation (18OC0034838, D. P. F.) and the NordForsk NCoE program ``NordAqua'' (Project Number 82845, D. P. F.). C. C. is funded by a PhD studentship from University of Aberdeen. N. J. is funded by the IBioIC CTP PhD programme. R. V. P. was funded by the Doctoral Programme in Microbiology and Biotechnology of the University of Helsinki. X. O. was funded by the China Scholarship Council (Grant 201906150148). We are grateful to Professor James Naismith (University of Oxford) for sharing the construct used to express the macrocyclase PCY1. We thank Dr Huanting Liu (University of St Andrews) for sharing the pEHISTEV-SUMO vector.; Clemente , C , Johnson , N , Ouyang , X , Popin , R , Dall'Angelo , S , Wahlsten , M , Jokela , J , Colombano , A , Nardone , B , Fewer , D P & Houssen , W E 2022 , ' Biochemical characterization of a cyanobactin arginine-N-prenylase from the autumnalamide biosynthetic pathway ' , Chemical Communications , vol. 58 , no. 86 , pp. 12054-12057 . https://doi.org/10.1039/d2cc01799gTest; ORCID: /0000-0003-3978-4845/work/123135547; ORCID: /0000-0001-5096-3575/work/123136680; ORCID: /0000-0002-4107-1695/work/123138419; ORCID: /0000-0003-0427-0326/work/123143232; http://hdl.handle.net/10138/350678Test; 3b58f94b-ecb7-4af4-af19-d4b0750e3f24; 000863636300001

الإتاحة: http://hdl.handle.net/10138/350678Test

المؤلفون: Vicentini Popin, Rafael, Oliveira de Alvarenga, Danillo, Castelo-Branco, Raquel, Fewer, David, Sivonen, Kaarina

المساهمون: Department of Microbiology, Helsinki Institute of Sustainability Science (HELSUS), Cyanobacteria research

مصطلحات موضوعية: BACTERIAL, DIVERSITY, EVOLUTION, IDENTIFICATION, IV SECRETION, MARINE CYANOBACTERIA, ODOROUS COMPOUNDS, PHOSPHOPANTETHEINYL TRANSFERASE, PHYLOGENETIC ANALYSIS, VISUALIZATION, conjugation, cyanobacteria, genome mining, geosmin, toxins, Ecology, evolutionary biology

وصف الملف: application/pdf

العلاقة: Vicentini Popin , R , Oliveira de Alvarenga , D , Castelo-Branco , R , Fewer , D & Sivonen , K 2021 , ' Mining of Cyanobacterial Genomes Indicates Natural Product Biosynthetic Gene Clusters Located in Conjugative Plasmids ' , Frontiers in Microbiology , vol. 12 , 684565 . https://doi.org/10.3389/fmicb.2021.684565Test; ORCID: /0000-0003-3978-4845/work/104401787; ORCID: /0000-0002-2904-0458/work/104402583; ORCID: /0000-0003-0427-0326/work/104405774; http://hdl.handle.net/10138/337151Test; 7809cf8c-8932-4ef8-8bc6-31b7cb802583; 000720109100001

الإتاحة: http://hdl.handle.net/10138/337151Test

المؤلفون: Konstantinou, Despoina, Popin, Rafael, Fewer, David P., Sivonen, Kaarina, Gkelis, Spyros

المساهمون: Department of Microbiology, Department of Food and Nutrition, Helsinki Institute of Sustainability Science (HELSUS), Microbial Natural Products, Cyanobacteria research

مصطلحات موضوعية: cyanobacteria, symbionts, marine sponges, comparative genomics, natural products, biosynthetic gene clusters, LIFE-STYLE, DIVERSITY, EVOLUTION, VERSION, PEPTIDES, INSIGHTS, REVEALS, QUALITY, PROTEIN, SERVER, 1181 Ecology, evolutionary biology, 11832 Microbiology and virology

وصف الملف: application/pdf

العلاقة: This study was supported by the General Secretariat for Research and Technology (GSRT) and the Hellenic Foundation for Research and Innovation (HFRI), grant number 938 (http://www.elidek.gr/en/homepageTest/, accessed on 12 March 2021) to D.K. S.G. would like to acknowledge co-funding of this work by the European Union and Greek national funds through the Operational Program Competitiveness, Entrepreneurship and Innovation, under the call RESEARCH-CREATE-INNOVATE (project code: T1EDK-02681). R.V.P. received funding from the Doctoral Program in Microbiology and Biotechnology from the University of Helsinki.; Konstantinou , D , Popin , R , Fewer , D P , Sivonen , K & Gkelis , S 2021 , ' Genome Reduction and Secondary Metabolism of the Marine Sponge-Associated Cyanobacterium Leptothoe ' , Marine Drugs , vol. 19 , no. 6 , 298 . https://doi.org/10.3390/md19060298Test; ORCID: /0000-0003-3978-4845/work/98321769; ORCID: /0000-0002-2904-0458/work/98322982; ORCID: /0000-0003-0427-0326/work/98325293; 135d16d4-2e7f-4cbc-b8c7-005b7513bc28; http://hdl.handle.net/10138/332988Test; 000666788400001

الإتاحة: http://hdl.handle.net/10138/332988Test

المؤلفون: Popin, Rafael Vicentini, Alvarenga, Danillo Oliveira, Castelo-Branco, Raquel, Fewer, David Peter, Sivonen, Kaarina

المصدر: Popin , R V , Alvarenga , D O , Castelo-Branco , R , Fewer , D P & Sivonen , K 2021 , ' Mining of Cyanobacterial Genomes Indicates Natural Product Biosynthetic Gene Clusters Located in Conjugative Plasmids ' , Frontiers in Microbiology , vol. 12 , 684565 . https://doi.org/10.3389/fmicb.2021.684565Test

وصف الملف: application/pdf

الإتاحة: https://doi.org/10.3389/fmicb.2021.684565Test
https://curis.ku.dk/portal/da/publications/mining-of-cyanobacterial-genomes-indicates-natural-product-biosynthetic-gene-clusters-located-in-conjugative-plasmidsTest(3e362da9-045d-4756-949a-6039fd09c222).html
https://curis.ku.dk/ws/files/286490301/Mining_of_Cyanobacterial_Genomes_Indicates_Natural_Product_Biosynthetic_Gene_Clusters_Located_in_Conjugative_Plasmids.pdfTest

المؤلفون: Shishido, Tania Keiko, Popin, Rafael Vicentini, Jokela, Jouni, Wahlsten, Matti, Fiore, Marli Fatima, Fewer, David P., Herfindal, Lars, Sivonen, Kaarina

المساهمون: Institute of Biotechnology, Department of Microbiology, Department of Food and Nutrition, Cyanobacteria research, Helsinki Institute of Sustainability Science (HELSUS), Microbial Natural Products

مصطلحات موضوعية: natural products, mass spectrometry, leukemia, antifungal, antibacterial, cyanotoxins, Nostoc, MARINE CYANOBACTERIA, GEN. NOV, MOLECULAR-MECHANISMS, COMPARATIVE GENOMICS, PROTEASE INHIBITORS, MASS-SPECTROMETRY, CYCLIC PEPTIDE, CELL-LINES, DIVERSITY, APOPTOSIS, 11832 Microbiology and virology

وصف الملف: application/pdf

العلاقة: This research was supported by the Academy of Finland, grant numbers 1258827, 1273798 (to K.S.), and 1259505 (to D.P.F.) and by the Fundacao de Amparo a Pesquisa do Estado Sao Paulo (FAPESP, grant 2013/50425-8 (to M.F.F). R.V.P. was supported by an EDUFI fellowship from the Centre for International Mobility and funding from the Doctoral Programme in Microbiology and Biotechnology. T.K.S. was supported by the Academy of Finland Grant 1308266 and the Finnish Cultural Foundation. L.H. received funding from NordForsk (NCoE Programme "NordAqua" (project #82845), Western Norway Health Authorities, and the Norwegian Society for Children's Cancer. K.S. also received funding from the Jane and Aatos Erkko Foundation. Open access funding provided by University of Helsinki.; Shishido , T K , Popin , R V , Jokela , J , Wahlsten , M , Fiore , M F , Fewer , D P , Herfindal , L & Sivonen , K 2020 , ' Dereplication of Natural Products with Antimicrobial and Anticancer Activity from Brazilian Cyanobacteria ' , Toxins , vol. 12 , no. 1 , 12 . https://doi.org/10.3390/toxins12010012Test; ORCID: /0000-0003-3978-4845/work/77085796; ORCID: /0000-0001-5096-3575/work/77086720; ORCID: /0000-0002-2904-0458/work/77086848; ORCID: /0000-0002-4107-1695/work/77087585; ORCID: /0000-0003-0427-0326/work/77090466; 47cb241a-0ab6-4ae7-a7e3-fbcf09d2b6be; http://hdl.handle.net/10138/317362Test; 000514630000010

الإتاحة: http://hdl.handle.net/10138/317362Test