المؤلفون: Hill, Steven M., Heiser, Laura M., Cokelaer, Thomas, Unger, Michael, Nesser, Nicole K., Carlin, Daniel E., Zhang, Yang, Sokolov, Artem, Paull, Evan O., Wong, Chris K., Graim, Kiley, Bivol, Adrian, Wang, Haizhou, Zhu, Fan, Afsari, Bahman, Danilova, Ludmila V., Favorov, Alexander V., Lee, Wai Shing, Taylor, Dane, Hu, Chenyue W., Long, Byron L., Noren, David P., Bisberg, Alexander J., Mills, Gordon B., Gray, Joe W., Kellen, Michael, Norman, Thea, Friend, Stephen, Qutub, Amina A., Fertig, Elana J., Guan, Yuanfang, Song, Mingzhou, Stuart, Joshua M., Spellman, Paul T., Koeppl, Heinz, Stolovitzky, Gustavo, Saez-Rodriguez, Julio, Mukherjee, Sach

وصف الملف: text; spreadsheet

العلاقة: https://tuprints.ulb.tu-darmstadt.de/27016/1/nmeth.3773.pdfTest; https://tuprints.ulb.tu-darmstadt.de/27016/2/41592_2016_BFnmeth3773_MOESM208_ESM.xlsxTest; https://tuprints.ulb.tu-darmstadt.de/27016/3/41592_2016_BFnmeth3773_MOESM209_ESM.xlsxTest; https://tuprints.ulb.tu-darmstadt.de/27016/4/41592_2016_BFnmeth3773_MOESM210_ESM.xlsxTest; https://tuprints.ulb.tu-darmstadt.de/27016/5/41592_2016_BFnmeth3773_MOESM211_ESM.xlsxTest; https://tuprints.ulb.tu-darmstadt.de/27016/6/41592_2016_BFnmeth3773_MOESM212_ESM.xlsxTest; https://tuprints.ulb.tu-darmstadt.de/27016/7/41592_2016_BFnmeth3773_MOESM213_ESM.xlsxTest; https://tuprints.ulb.tu-darmstadt.de/27016/8/41592_2016_BFnmeth3773_MOESM207_ESM.pdfTest; Hill, Steven M.; Heiser, Laura M.; Cokelaer, Thomas; Unger, Michael; Nesser, Nicole K.; Carlin, Daniel E.; Zhang, Yang; Sokolov, Artem; Paull, Evan O.; Wong, Chris K.; Graim, Kiley; Bivol, Adrian; Wang, Haizhou; Zhu, Fan; Afsari, Bahman; Danilova, Ludmila V.; Favorov, Alexander V.; Lee, Wai Shing; Taylor, Dane; Hu, Chenyue W.; Long, Byron L.; Noren, David P.; Bisberg, Alexander J.; Mills, Gordon B.; Gray, Joe W.; Kellen, Michael; Norman, Thea; Friend, Stephen; Qutub, Amina A.; Fertig, Elana J.; Guan, Yuanfang; Song, Mingzhou; Stuart, Joshua M.; Spellman, Paul T.; Koeppl, Heinz; Stolovitzky, Gustavo; Saez-Rodriguez, Julio; Mukherjee, Sach (2024)Inferring causal molecular networks: empirical assessment through a community-based effort. In: Nature Methods, 2016, 13 (4) doi:10.26083/tuprints-00027016 Article, Secondary publication, Publisher's Version

الإتاحة: https://doi.org/10.26083/tuprints-00027016Test
http://tuprints.ulb.tu-darmstadt.de/27016Test/
https://tuprints.ulb.tu-darmstadt.de/27016/1/nmeth.3773.pdfTest
https://tuprints.ulb.tu-darmstadt.de/27016/2/41592_2016_BFnmeth3773_MOESM208_ESM.xlsxTest
https://tuprints.ulb.tu-darmstadt.de/27016/3/41592_2016_BFnmeth3773_MOESM209_ESM.xlsxTest
https://tuprints.ulb.tu-darmstadt.de/27016/4/41592_2016_BFnmeth3773_MOESM210_ESM.xlsxTest
https://tuprints.ulb.tu-darmstadt.de/27016/5/41592_2016_BFnmeth3773_MOESM211_ESM.xlsxTest
https://tuprints.ulb.tu-darmstadt.de/27016/6/41592_2016_BFnmeth3773_MOESM212_ESM.xlsxTest
https://tuprints.ulb.tu-darmstadt.de/27016/7/41592_2016_BFnmeth3773_MOESM213_ESM.xlsxTest
https://tuprints.ulb.tu-darmstadt.de/27016/8/41592_2016_BFnmeth3773_MOESM207_ESM.pdfTest

المؤلفون: Broyde, Joshua, Simpson, David R, Murray, Diana, Paull, Evan O, Chu, Brennan W, Tagore, Somnath, Jones, Sunny J, Griffin, Aaron T, Giorgi, Federico M, Lachmann, Alexander, Jackson, Peter, Sweet-Cordero, E Alejandro, Honig, Barry, Califano, Andrea

المصدر: Nature Biotechnology. 39(2)

مصطلحات موضوعية: Biochemistry and Cell Biology, Bioinformatics and Computational Biology, Biomedical and Clinical Sciences, Biological Sciences, Oncology and Carcinogenesis, Biotechnology, Cancer, Genetics, Algorithms, Animals, Gene Regulatory Networks, Humans, Mice, Mutation, Neoplasms, Oncogene Proteins, Organoids, Proto-Oncogene Proteins p21(ras), RNA, Small Interfering, ROC Curve, Signal Transduction

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/2mk5f4k5Test

المؤلفون: Thorsson, Vésteinn, Gibbs, David L, Brown, Scott D, Wolf, Denise, Bortone, Dante S, Yang, Tai-Hsien Ou, Porta-Pardo, Eduard, Gao, Galen F, Plaisier, Christopher L, Eddy, James A, Ziv, Elad, Culhane, Aedin C, Paull, Evan O, Sivakumar, IK Ashok, Gentles, Andrew J, Malhotra, Raunaq, Farshidfar, Farshad, Colaprico, Antonio, Parker, Joel S, Mose, Lisle E, Vo, Nam Sy, Liu, Jianfang, Liu, Yuexin, Rader, Janet, Dhankani, Varsha, Reynolds, Sheila M, Bowlby, Reanne, Califano, Andrea, Cherniack, Andrew D, Anastassiou, Dimitris, Bedognetti, Davide, Mokrab, Younes, Newman, Aaron M, Rao, Arvind, Chen, Ken, Krasnitz, Alexander, Hu, Hai, Malta, Tathiane M, Noushmehr, Houtan, Pedamallu, Chandra Sekhar, Bullman, Susan, Ojesina, Akinyemi I, Lamb, Andrew, Zhou, Wanding, Shen, Hui, Choueiri, Toni K, Weinstein, John N, Guinney, Justin, Saltz, Joel, Holt, Robert A, Rabkin, Charles S, Network, The Cancer Genome Atlas Research, Caesar-Johnson, Samantha J, Demchok, John A, Felau, Ina, Kasapi, Melpomeni, Ferguson, Martin L, Hutter, Carolyn M, Sofia, Heidi J, Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Zenklusen, Jean C, Zhang, Jiashan, Chudamani, Sudha, Liu, Jia, Lolla, Laxmi, Naresh, Rashi, Pihl, Todd, Sun, Qiang, Wan, Yunhu, Wu, Ye, Cho, Juok, DeFreitas, Timothy, Frazer, Scott, Gehlenborg, Nils, Getz, Gad, Heiman, David I, Kim, Jaegil, Lawrence, Michael S, Lin, Pei, Meier, Sam, Noble, Michael S, Saksena, Gordon, Voet, Doug, Zhang, Hailei, Bernard, Brady, Chambwe, Nyasha, Knijnenburg, Theo, Kramer, Roger, Leinonen, Kalle, Miller, Michael, Reynolds, Sheila, Shmulevich, Ilya, Thorsson, Vesteinn, Zhang, Wei, Akbani, Rehan, Broom, Bradley M

المصدر: Immunity. 51(2)

مصطلحات موضوعية: Biomedical and Clinical Sciences, Immunology, Cancer Genome Atlas Research Network

الوصول الحر: https://escholarship.org/uc/item/71f627hsTest

المؤلفون: Thorsson, Vésteinn, Gibbs, David L, Brown, Scott D, Wolf, Denise, Bortone, Dante S, Ou Yang, Tai-Hsien, Porta-Pardo, Eduard, Gao, Galen F, Plaisier, Christopher L, Eddy, James A, Ziv, Elad, Culhane, Aedin C, Paull, Evan O, Sivakumar, IK Ashok, Gentles, Andrew J, Malhotra, Raunaq, Farshidfar, Farshad, Colaprico, Antonio, Parker, Joel S, Mose, Lisle E, Vo, Nam Sy, Liu, Jianfang, Liu, Yuexin, Rader, Janet, Dhankani, Varsha, Reynolds, Sheila M, Bowlby, Reanne, Califano, Andrea, Cherniack, Andrew D, Anastassiou, Dimitris, Bedognetti, Davide, Mokrab, Younes, Newman, Aaron M, Rao, Arvind, Chen, Ken, Krasnitz, Alexander, Hu, Hai, Malta, Tathiane M, Noushmehr, Houtan, Pedamallu, Chandra Sekhar, Bullman, Susan, Ojesina, Akinyemi I, Lamb, Andrew, Zhou, Wanding, Shen, Hui, Choueiri, Toni K, Weinstein, John N, Guinney, Justin, Saltz, Joel, Holt, Robert A, Rabkin, Charles S, Lazar, Alexander J, Serody, Jonathan S, Demicco, Elizabeth G, Disis, Mary L, Vincent, Benjamin G, Shmulevich, Ilya, Caesar-Johnson, Samantha J, Demchok, John A, Felau, Ina, Kasapi, Melpomeni, Ferguson, Martin L, Hutter, Carolyn M, Sofia, Heidi J, Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Zenklusen, Jean C, Zhang, Jiashan Julia, Chudamani, Sudha, Liu, Jia, Lolla, Laxmi, Naresh, Rashi, Pihl, Todd, Sun, Qiang, Wan, Yunhu, Wu, Ye, Cho, Juok, DeFreitas, Timothy, Frazer, Scott, Gehlenborg, Nils, Getz, Gad, Heiman, David I, Kim, Jaegil, Lawrence, Michael S, Lin, Pei, Meier, Sam, Noble, Michael S, Saksena, Gordon, Voet, Doug, Zhang, Hailei, Bernard, Brady, Chambwe, Nyasha, Knijnenburg, Theo, Kramer, Roger, Leinonen, Kalle, Miller, Michael, Reynolds, Sheila

المصدر: Immunity. 48(4)

مصطلحات موضوعية: Biomedical and Clinical Sciences, Oncology and Carcinogenesis, Immunology, Human Genome, Cancer, Immunotherapy, Genetics, Cancer Genomics, Inflammatory and immune system, Adolescent, Adult, Aged, Aged, 80 and over, Child, Female, Genomics, Humans, Interferon-gamma, Macrophages, Male, Middle Aged, Neoplasms, Prognosis, Th1-Th2 Balance, Transforming Growth Factor beta, Wound Healing, Young Adult, Cancer Genome Atlas Research Network, cancer genomics, immune subtypes, immuno-oncology, immunomodulatory, immunotherapy, integrative network analysis, tumor immunology, tumor microenvironment

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/4wd3s0b1Test
https://escholarship.org/content/qt4wd3s0b1/qt4wd3s0b1.pdfTest

المؤلفون: Graim, Kiley, Liu, Tiffany Ting, Achrol, Achal S, Paull, Evan O, Newton, Yulia, Chang, Steven D, Harsh, Griffith R, Cordero, Sergio P, Rubin, Daniel L, Stuart, Joshua M

المصدر: BMC Medical Genomics. 10(1)

مصطلحات موضوعية: Biomedical and Clinical Sciences, Oncology and Carcinogenesis, Brain Cancer, Brain Disorders, Rare Diseases, Urologic Diseases, Clinical Research, Cancer, 4.1 Discovery and preclinical testing of markers and technologies, Detection, screening and diagnosis, Computational Biology, DNA Copy Number Variations, Genotype, Glioblastoma, Humans, Magnetic Resonance Imaging, Mutation, Phenotype, Molecular subtyping, Community detection, MRI, Magnetic resonance imaging, Clustering, Genetics, Medical Biochemistry and Metabolomics, Genetics & Heredity, Medical biochemistry and metabolomics

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/63k9m4j6Test

المؤلفون: Niepel, Mario, Hafner, Marc, Duan, Qiaonan, Wang, Zichen, Paull, Evan O, Chung, Mirra, Lu, Xiaodong, Stuart, Joshua M, Golub, Todd R, Subramanian, Aravind, Ma'ayan, Avi, Sorger, Peter K

المصدر: Nature communications. 8(1)

مصطلحات موضوعية: Cell Line, Tumor, Humans, Antineoplastic Agents, Gene Expression Profiling, Drug Synergism, High-Throughput Screening Assays, Genetics, Cancer, Pediatric Research Initiative, 5.1 Pharmaceuticals, 1.1 Normal biological development and functioning, Cell Line, Tumor, MD Multidisciplinary

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/7f98v4fxTest

المؤلفون: Carlin, Daniel E, Paull, Evan O, Graim, Kiley, Wong, Christopher K, Bivol, Adrian, Ryabinin, Peter, Ellrott, Kyle, Sokolov, Artem, Stuart, Joshua M

المصدر: PLOS ONE. 12(12)

مصطلحات موضوعية: Biochemistry and Cell Biology, Bioinformatics and Computational Biology, Biological Sciences, Cancer, Bioengineering, Biotechnology, Genetics, Causality, Computational Biology, Gene Regulatory Networks, Humans, Machine Learning, Models, Theoretical, Neoplasms, Systems Biology, General Science & Technology

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/7s82g428Test

المؤلفون: Drake, Justin M, Paull, Evan O, Graham, Nicholas A, Lee, John K, Smith, Bryan A, Titz, Bjoern, Stoyanova, Tanya, Faltermeier, Claire M, Uzunangelov, Vladislav, Carlin, Daniel E, Fleming, Daniel Teo, Wong, Christopher K, Newton, Yulia, Sudha, Sud, Vashisht, Ajay A, Huang, Jiaoti, Wohlschlegel, James A, Graeber, Thomas G, Witte, Owen N, Stuart, Joshua M

المصدر: Cell. 166(4)

مصطلحات موضوعية: Humans, Phosphoproteins, Proteome, Signal Transduction, Algorithms, Male, Transcriptome, Prostatic Neoplasms, Castration-Resistant, Precision Medicine, Prostatic Neoplasms, Castration-Resistant, Developmental Biology, Biological Sciences, Medical and Health Sciences

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/3dz5v9gkTest

المؤلفون: Hill, Steven M, Heiser, Laura M, Cokelaer, Thomas, Unger, Michael, Nesser, Nicole K, Carlin, Daniel E, Zhang, Yang, Sokolov, Artem, Paull, Evan O, Wong, Chris K, Graim, Kiley, Bivol, Adrian, Wang, Haizhou, Zhu, Fan, Afsari, Bahman, Danilova, Ludmila V, Favorov, Alexander V, Lee, Wai Shing, Taylor, Dane, Hu, Chenyue W, Long, Byron L, Noren, David P, Bisberg, Alexander J, Mills, Gordon B, Gray, Joe W, Kellen, Michael, Norman, Thea, Friend, Stephen, Qutub, Amina A, Fertig, Elana J, Guan, Yuanfang, Song, Mingzhou, Stuart, Joshua M, Spellman, Paul T, Koeppl, Heinz, Stolovitzky, Gustavo, Saez-Rodriguez, Julio, Mukherjee, Sach

المصدر: Nature Methods. 13(4)

مصطلحات موضوعية: Biochemistry and Cell Biology, Biological Sciences, Bioengineering, Cancer, Algorithms, Causality, Computational Biology, Computer Simulation, Gene Expression Profiling, Gene Regulatory Networks, Humans, Models, Biological, Neoplasms, Protein Interaction Mapping, Signal Transduction, Software, Systems Biology, Tumor Cells, Cultured, HPN-DREAM Consortium, Technology, Medical and Health Sciences, Developmental Biology, Biological sciences

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/1v8904drTest

المؤلفون: Sokolov, Artem, Carlin, Daniel E, Paull, Evan O, Baertsch, Robert, Stuart, Joshua M

المصدر: PLoS computational biology. 12(3)

مصطلحات موضوعية: Animals, Humans, Proteome, Chromosome Mapping, Protein Interaction Mapping, Signal Transduction, Models, Genetic, Computer Simulation, Pattern Recognition, Automated, Models, Genetic, Pattern Recognition, Automated, Mathematical Sciences, Biological Sciences, Information and Computing Sciences, Bioinformatics

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/97j8f0q8Test