نتائج البحث - "OTU, Operational taxonomic unit"

المساهمون: Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Asociación Española Contra el Cáncer, Generalitat Valenciana, European Commission

المصدر: Computational and Structural Biotechnology Journal, Vol 20, Iss, Pp 421-433 (2022)
Computational and Structural Biotechnology Journal

مصطلحات موضوعية: OTU, Operational Taxonomic Unit, NCBI, National Center for Biotechnology Information, Genome databases, Biophysics, Biochemistry, Computer Science Applications, Enrichment strategies, Structural Biology, Genetics, Core microbiota, Metagenomics, Human gut microbiota, TP248.13-248.65, ComputingMethodologies_COMPUTERGRAPHICS, Research Article, Western bias, Biotechnology

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::62431039d2e87223b8f674e58d47eae0Test
http://www.sciencedirect.com/science/article/pii/S2001037021005444Test

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Dysbiosis and Intestinal Barrier Dysfunction in Pediatric Congenital Heart Disease Is Exacerbated Following Cardiopulmonary Bypass

المؤلفون: Ajay Jain, Chandrashekhara Manithody, Yashpal S. Chhonker, Paula Buchanan, Daryl J. Murry, Amber Price, Amar B. Singh, Jeffrey Salomon, Merry L. Lindsey, Aaron C. Ericsson

المصدر: JACC: Basic to Translational Science

مصطلحات موضوعية: 0301 basic medicine, medicine.medical_specialty, bacterial interactions, Exacerbation, Heart disease, intestinal microbiology, 030204 cardiovascular system & hematology, EBD, epithelial barrier dysfunction, intestinal barrier function, law.invention, 03 medical and health sciences, 0302 clinical medicine, DNA, deoxyribonucleic acid, law, Clinical Research, cardiovascular disease, Internal medicine, Cardiopulmonary bypass, medicine, OTU, operational taxonomic unit, PGE2, prostaglandin E2, Microbiome, RA, relative abundance, ANOVA, analysis of variance, FABP2, fatty acid binding protein 2, business.industry, CPB - Cardiopulmonary bypass, LCOS, low–cardiac output syndrome, rRNA, ribosomal ribonucleic acid, CPB, cardiopulmonary bypass, medicine.disease, Control subjects, enteric bacterial microflora, CHD, congenital heart disease, 030104 developmental biology, Cardiology, Cardiology and Cardiovascular Medicine, business, Dysbiosis, NPO, nil per os, DNA - Deoxyribonucleic acid

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::634e4718d05879823b449bcb621e4b3fTest
http://europepmc.org/articles/PMC8093480Test

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Dietary Fructose Alters the Composition, Localization, and Metabolism of Gut Microbiota in Association With Worsening Colitis

المصدر: Cellular and Molecular Gastroenterology and Hepatology

مصطلحات موضوعية: Male, 0301 basic medicine, Dietary Sugars, Gut flora, Severity of Illness Index, Bile Acids, Feces, Mice, chemistry.chemical_compound, 0302 clinical medicine, Citrobacter rodentium, FISH, fluorescent in situ hybridization, DSS, dextran sodium sulfate, Intestinal Mucosa, Original Research, Mice, Knockout, SPF, specific pathogen-free, biology, HGD, high glucose diet, Microbiota, Dextran Sulfate, Gastroenterology, qRT-PCR, quantitative real-time polymerase chain reaction, Colitis, Interleukin-10, BA, bile acid, Female, 030211 gastroenterology & hepatology, NASH, nonalcoholic steatohepatitis, Colon, PBS, phosphate-buffered saline, Il, interleukin, Fructose, Microbiology, 03 medical and health sciences, Genetic model, OTU, operational taxonomic unit, medicine, Animals, Humans, IBD, inflammatory bowel diseases, ABx, antibiotics, Hepatology, Metabolism, biology.organism_classification, medicine.disease, WT, wild-type, Mucus, Gastrointestinal Microbiome, GF, germ-free, UPLC-MS/MS, ultra-high performance liquid chromatography-tandem mass spectrometry, Disease Models, Animal, AB/PAS, alcian blue/periodic-acid Schiff, 030104 developmental biology, chemistry, BSH, bile salt hydrolase, HFrD, high fructose diet

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aa877af36a326eeaf10dffe45f63d184Test
https://doi.org/10.1016/j.jcmgh.2020.09.008Test

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Polychlorinated biphenyls altered gut microbiome in CAR and PXR knockout mice exhibiting toxicant-associated steatohepatitis

المؤلفون: Irina A. Kirpich, Banrida Wahlang, Nicholas C. Alexander, Xiaohong Li, Matthew C. Cave, Eric C. Rouchka

المصدر: Toxicology Reports, Vol 8, Iss, Pp 536-547 (2021)
Toxicology Reports

مصطلحات موضوعية: Tjp1, tight junction protein 1, Health, Toxicology and Mutagenesis, RER, respiratory exchange rate, ACHS, anniston community healthy survey, Camp, cathelicidin anti-microbial peptide, 010501 environmental sciences, Toxicology, 01 natural sciences, chemistry.chemical_compound, 0302 clinical medicine, HFD, high fat diet, Tnfa, tumor necrosis factor, HOMA, homeostasis model assessment, RA1190-1270, Cldn, claudin, Constitutive androstane receptor, Aroclor1260, PCBs, Pck1, phosphoenolpyruvate carboxykinase 1, Pregnane X receptor, Fatty liver, Cdh5, adhesion molecule VE-cadherin, Regular Article, PXR, pregnane-xenobiotic receptor, Muc, mucin, Gut-liver, Knockout mouse, CAR, constitutive androstane receptor, NASH, nonalcoholic steatohepatitis, AhR, arylhydrocarbon receptor, medicine.medical_specialty, Fasn, fatty acid synthase, Biology, digestive system, Ppara, peroxisome-proliferator activated receptor alpha, 03 medical and health sciences, PCBs, polychlorinated biphenyls, Tff3, trefoil factor 3, Internal medicine, NAFLD, OTU, operational taxonomic unit, medicine, WT, wildtype, Microbiome, IBD, inflammatory bowel diseases, Gene knockout, ComputingMethodologies_COMPUTERGRAPHICS, 0105 earth and related environmental sciences, TASH, toxicant-associated steatohepatitis, Fgf15, fibroblast growth factor 15, medicine.disease, LEfSe, linear discriminant analysis effect size, digestive system diseases, Ocln, occludin, Endocrinology, TASH, chemistry, Toxicology. Poisons, NAFLD, nonalcoholic fatty liver disease, Reg3g, regenerating islet-derived protein 3-gamma, Steatohepatitis, human activities, LDA, linear discriminant analysis, 030217 neurology & neurosurgery, Toxicant

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::39015a534cdc9d853739a1ae71598521Test
http://www.sciencedirect.com/science/article/pii/S2214750021000512Test

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In silico trio biomarkers for bacterial vaginosis revealed by species dominance network analysis

المؤلفون: Aaron M. Ellison, Zhanshan Sam Ma

المصدر: Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 2979-2989 (2021)
Computational and Structural Biotechnology Journal

مصطلحات موضوعية: Clinical tests, Diversity-stability relationship (DSR), In silico, Biophysics, HSN, high-salience skeleton network, Core/periphery network (CPN), SDN, species dominance network, Biology, Species dominance network (SDN), Biochemistry, DNA sequencing, 03 medical and health sciences, CST, community state type, 0302 clinical medicine, Structural Biology, CPN, core/periphery network, OTU, operational taxonomic unit, Genetics, medicine, MAO, most abundant species or OTU, ABV, asymptomatic bacterial vaginosis, ComputingMethodologies_COMPUTERGRAPHICS, MDO, most dominant species or OTU, 030304 developmental biology, 0303 health sciences, DSR, diversity-stability relationship, High-salience skeleton networks (HSN), medicine.disease, Computer Science Applications, HEA, healthy treatment, BV-associated anaerobic bacteria (BVAB), SBV, symptomatic BV, BV (Bacterial vaginosis), HVM, human vaginal microbiome, 030220 oncology & carcinogenesis, BV, bacterial vaginosis, Vaginal microbiome, Etiology, Anaerobic bacteria, Community dominance, Bacterial vaginosis, Species dominance, Dysbiosis, TP248.13-248.65, Research Article, BVAB, BV-associated anaerobic bacteria, Biotechnology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::84c6453628e58d7508b60855d2876181Test
http://www.sciencedirect.com/science/article/pii/S2001037021002014Test

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Corrigendum: The effect of low-abundance OTU filtering methods on the reliability and variability of microbial composition assessed by 16S rRNA amplicon sequencing.

المؤلفون: Nikodemova, Maria, Holzhausen, Elizabeth A, Deblois, Courtney L, Barnet, Jodi H, Peppard, Paul E, Suen, Garret, Malecki, Kristen M

المصدر: Front Cell Infect Microbiol ; ISSN:2235-2988 ; Volume:14

مصطلحات موضوعية: OTU (Operational Taxonomic Unit), accuracy, filtering, low abundance, microbiome, reliability – reproducibility of results

العلاقة: https://doi.org/10.3389/fcimb.2024.1419131Test; https://pubmed.ncbi.nlm.nih.gov/38938881Test; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11208917Test/

الإتاحة: https://doi.org/10.3389/fcimb.2024.1419131Test
https://pubmed.ncbi.nlm.nih.gov/38938881Test
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11208917Test/

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10

NOD2 Influences Trajectories of Intestinal Microbiota Recovery After Antibiotic PerturbationSummary

المؤلفون: Simone Lipinski, Jacqueline Moltzau Anderson, Konrad Aden, Felix Sommer, John F. Baines, Wei-Hung Pan, Olivier Boulard, Robert Häsler, Sven Künzel, Philip Rosenstiel, Stephanie T. Stengel, Richa Bharti, Maren Falk-Paulsen, Ateequr Rehman, Mathias Chamaillard

المصدر: Cellular and Molecular Gastroenterology and Hepatology, Vol 10, Iss 2, Pp 365-389 (2020)
Cellular and Molecular Gastroenterology and Hepatology

مصطلحات موضوعية: 0301 basic medicine, medicine.drug_class, Antibiotics, IBD, Nod2 Signaling Adaptor Protein, PCoA, principle coordinate analysis, Gut flora, Inflammatory bowel disease, SPF, specific pathogen free, Bacterial cell structure, NOD2, Microbiology, 03 medical and health sciences, 0302 clinical medicine, GEE, generalized estimating equation, CXCL1, chemokine (C-X-C motif) ligand 1, Gene expression, CD, Crohn’s disease, OTU, operational taxonomic unit, medicine, lcsh:RC799-869, qPCR, quantitative real-time polymerase chain reaction, Feces, Original Research, KO, knockout, IBD, inflammatory bowel disease, Hepatology, biology, Microbiota, Gastroenterology, biology.organism_classification, medicine.disease, WT, wild-type, digestive system diseases, Anti-Bacterial Agents, Gastrointestinal Microbiome, rRNA, ribosomal RNA, GF, germ-free, NOD2, nucleotide-binding oligomerization domain-containing protein 2, 030104 developmental biology, ITS, internal transcribed spacer, Microbial Resilience, 030211 gastroenterology & hepatology, lcsh:Diseases of the digestive system. Gastroenterology, Bacteria, Antibiotic Treatment

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::350d9ac8131b555316facf8321e6cd85Test
http://www.sciencedirect.com/science/article/pii/S2352345X20300448Test

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