المؤلفون: Doriano Lamba, Sonia Covaceuszach, Franci Merzel, Alberto Cassetta, Francesca Paoletti, Simona Golic Grdadolnik, Iza Ogris, Jože Grdadolnik

المصدر: Computational and Structural Biotechnology Journal 19 (2021): 2938–2949. doi:10.1016/j.csbj.2021.05.009
info:cnr-pdr/source/autori:Paoletti F.; Merzel F.; Cassetta A.; Ogris I.; Covaceuszach S.; Grdadolnik J.; Lamba D.; Golic Grdadolnik S./titolo:Endogenous modulators of neurotrophin signaling: Landscape of the transient ATP-NGF interactions/doi:10.1016%2Fj.csbj.2021.05.009/rivista:Computational and Structural Biotechnology Journal/anno:2021/pagina_da:2938/pagina_a:2949/intervallo_pagine:2938–2949/volume:19
Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 2938-2949 (2021)
Computational and Structural Biotechnology Journal

مصطلحات موضوعية: BDNF, Brain Derived Neurotrophic Factor, SAR, Structure-Activity Relationship, PME, Particle Mesh Ewald, rh-proNGF, recombinant human proNGF – NGF precursor, rmNGF, recombinant mouse NGF, RMSD, Root Mean Square Deviation, Endogeny, CS-E, Chrondroitin Sulfate E, ITC, Isothermal Titration Calorimetry, Tropomyosin receptor kinase A, Biochemistry, 0302 clinical medicine, Structural Biology, P20, Polysorbate 20, rkA, NOE, Nuclear Overhouser Effect, Receptor, proNGF, proNGF – NGF precursor, chemistry.chemical_classification, ARIA, Ambiguous Restraints for Iterative Assignment, 0303 health sciences, TrkA, Tyrosine Kinase Receptor A, biology, NT, NeuroTrophin, Computer Science Applications, Cell biology, medicine.anatomical_structure, 030220 oncology & carcinogenesis, STD, Saturation-Transfer Difference, Research Article, Biotechnology, Neurotrophin, FGF2, Fibroblast Growth Factor 2, FT-IR, Fourier Transform Infrared Spectroscopy, TrkA, p75NTR receptors, NOESY, Nuclear Overhauser Effect Spectroscopy, SPR, Surface Plasmon Resonance, Biophysics, MALDI-TOF MS, Matrix Assisted Laser Desorption Ionization-Time Of Flight Mass Spectrometry, MD, Molecular Dynamics, NMR, Nuclear Magnetic Resonance, Neurotrophins, Divalent, EI-MS, Electron Ionization Mass Spectrometry, 03 medical and health sciences, CARA, Computer Aided Resonance Assignment, Genetics, Extracellular, medicine, ComputingMethodologies_COMPUTERGRAPHICS, 030304 developmental biology, MS, Mass Spectrometry, DSF, Differential Scanning Fluorimetry, NGF interactions, HBD, Heparin Binding Domain, p75NTR, p75 NeuroTrophin Receptor, NGF, Nerve Growth Factor, Endogenous ligands, rhNGF, recombinant human NGF, p75NTR receptors, Nerve growth factor, nervous system, chemistry, biology.protein, CSP, Chemical Shift Perturbation, ATP modulation, Neuron, HSQC, Heteronuclear Single Quantum Coherence, TP248.13-248.65

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dad8b1ec3a685ab9524b7c239670f5beTest
https://doi.org/10.1016/j.csbj.2021.05.009Test

المؤلفون: R. Lusczek, Elizabeth, Nelson, Teresa, Lexcen, Daniel, E. Witowski, Nancy, E. Mulier, Kristine, Beilman, Greg

المساهمون: University of Minnesota, Critical Care and Acute Care Surgery, 516 Delaware St. SE, Minneapolis, MN 55455 USA, Technomics Research, 1815 Medina Rd, Suite 101, Minneapolis, MN 55356 USA, 1University of Minnesota, Critical Care and Acute Care Surgery, 516 Delaware St. SE, Minneapolis, MN 55455 USA

المصدر: ISSN: 1948-593X ; Journal of Bioanalysis & Biomedicine ; https://hal.science/hal-04018829Test ; Journal of Bioanalysis & Biomedicine, 2011, 03, ⟨10.4172/1948-593x.1000041⟩.

مصطلحات موضوعية: Hemorrhagic Shock Metabolomics Urine Normalization NMR Creatinine NMR: Nuclear Magnetic Resonance TSP: 3-(Trimethylsilyl)propionic acid NOESY: Nuclear Overhauser Effect Spectroscopy FFT: Fast Fourier Transform lac: Lactate cr: Creatinine CS: Constant Sum CS-LGU: Constant Sum computed without Lactate, Glucose, and Urea signals TSI: Total Spectral Intensity PQ: Probabilistic Quotient OSM: Osmolality UO: Urine output rmANOVA: repeated measures analysis of variance PCA: principal components analysis PC1: principal component 1 PC2: principal pomponent 2 PC3: principal component 3 IQR: interquartile range, Hemorrhagic Shock, Metabolomics, Urine, Normalization, NMR, Creatinine NMR: Nuclear Magnetic Resonance, TSP: 3-(Trimethylsilyl)propionic acid, NOESY: Nuclear Overhauser Effect Spectroscopy, FFT: Fast Fourier Transform, lac: Lactate, cr: Creatinine, CS: Constant Sum, CS-LGU: Constant Sum computed without Lactate, and Urea signals, TSI: Total Spectral Intensity, PQ: Probabilistic Quotient, OSM: Osmolality, UO: Urine output, rmANOVA: repeated measures analysis of variance, PCA: principal components analysis, PC1: principal component 1, PC2: principal pomponent 2, PC3: principal component 3, IQR: interquartile range, [SDV]Life Sciences [q-bio]

العلاقة: hal-04018829; https://hal.science/hal-04018829Test; https://hal.science/hal-04018829/documentTest; https://hal.science/hal-04018829/file/urine-metabolomics-in-hemorrhagic-shock-normalization-of-urine-in-the-face-of-changing-intravascular-fluid-volume-and-perturbations-in-metabolism-1948-593X.1000041.pdfTest

الإتاحة: https://doi.org/10.4172/1948-593x.1000041Test
https://hal.science/hal-04018829Test
https://hal.science/hal-04018829/documentTest
https://hal.science/hal-04018829/file/urine-metabolomics-in-hemorrhagic-shock-normalization-of-urine-in-the-face-of-changing-intravascular-fluid-volume-and-perturbations-in-metabolism-1948-593X.1000041.pdfTest

المؤلفون: Han-Zhong Feng, Felipe Hornos, Jian Ping Jin, Martina Palomino-Schätzlein, Bruno Rizzuti, José L. Neira, David F. Wieczorek

المصدر: Zaguán. Repositorio Digital de la Universidad de Zaragoza
instname
Zaguán: Repositorio Digital de la Universidad de Zaragoza
Universidad de Zaragoza
JOURNAL OF BIOLOGICAL CHEMISTRY
r-CIPF. Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
Universitat Rovira i virgili (URV)
The Journal of Biological Chemistry

مصطلحات موضوعية: 0301 basic medicine, Protein Conformation, alpha-Helical, Tm, tropomyosin, Tm, thermal denaturation midpoint, computer modeling, hypertrophic cardiomyopathy, muscle contractility, peptide conformation, skinned cardiac muscle, troponin I, Circular dichroism, Muscle Relaxation, TSP, sodium trimethylsilyl [2,2,3,3-2H4] propionate, Muscle Fibers, Skeletal, Gene Expression, Tropomyosin, Biochemistry, MW, molecular weight, Substrate Specificity, RMSD, root mean square deviation, Mice, Myofibrils, skinned cardiac muscle, muscle contractility, CD, circular dichroism, DOSY, diffusion ordered spectroscopy, Tn, troponin, education.field_of_study, HcTnI-C27, C-terminal 27-mer peptide of human cardiac TnI, biology, ITC, isothermal titration calorimetry, Chemistry, ROE, rotating-frame Overhauser enhancement, Cardiac muscle, MD, molecular dynamics, Peptide Conformation, Molecular Docking Simulation, medicine.anatomical_structure, Muscle relaxation, αTm, α-tropomyosin, tr-NOESY, transferred NOESY, TFE, 2,2,2-trifluoroethanol, TnI, troponin I, Research Article, Protein Binding, COSY, correlation spectroscopy, DQF, double quantum filtered, pCa50, pCa required for 50% maximum activation of myofibrils, Population, HFpEF, heart failure with preserved ejection fraction, NOESY, nuclear Overhauser effect spectroscopy, TOCSY, total correlation spectroscopy, 03 medical and health sciences, TPPI, time proportional phase incrementation, medicine, Animals, Humans, peptide conformation, Protein Interaction Domains and Motifs, Amino Acid Sequence, mAb, monoclonal antibody, NMR, nuclear magnetic resonance, NOE, nuclear Overhauser effect, education, Molecular Biology, computer modeling, Binding Sites, 030102 biochemistry & molecular biology, Sequence Homology, Amino Acid, Troponin I, Isothermal titration calorimetry, Cell Biology, Cardiomyopathy, Hypertrophic, hypertrophic cardiomyopathy, CSP, chemical shift perturbation, WT, wild-type, Troponin, ROESY, rotating-frame Overhauser enhancement spectroscopy, UV, ultraviolet, Disease Models, Animal, Kinetics, 030104 developmental biology, Amino Acid Substitution, SL, sarcomere length, Mutation, biology.protein, Biophysics, HcTnI-C27-H, Arg192His mutant of the C-terminal 27-mer peptide of human cardiac TnI, Calcium, Peptides, Sequence Alignment

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::009fc79036334ac9d5af5ed53edbd703Test
http://zaguan.unizar.es/record/101648Test

المؤلفون: Dipita Bhattacharyya, Anirban Bhunia, Anirban Ghosh

المصدر: Biochimica et Biophysica Acta. Biomembranes

مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Magnetic Resonance Spectroscopy, Lipid Bilayers, ssRNA, single-stranded ribonucleic acid, Peptide, DPH, 1,6-diphenyl-1,3,5-hexatriene, Biochemistry, Micelle, Protein Structure, Secondary, Bacterial cell structure, Viroporin Proteins, CoV, corona virus, Viral Envelope Proteins, SARS, Severe Acute Respiratory Syndrome, Micelles, chemistry.chemical_classification, POPE, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, Circular Dichroism, Sodium Dodecyl Sulfate, Paramagnetic relaxation, Nuclear magnetic resonance spectroscopy, Membrane, Oligopeptides, Two-dimensional nuclear magnetic resonance spectroscopy, NOESY, nuclear overhauser effect spectroscopy, Protein Binding, SDS, sodium dodecyl sulfate, Phosphorylcholine, Biophysics, TOCSY, total correlation spectroscopy, DSS, 4,4-dimethyl-4-silapentane-1-sulfonic acid, Article, Virus, 03 medical and health sciences, Residue (chemistry), LUVs, large unilamellar vesicles, DPC, dodecylphosphocholine, Animals, Humans, POPG, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol, Amino Acid Sequence, RMSD, root-mean-square deviation, HSQC, heteronuclear single-quantum correlation, Unilamellar Liposomes, 030102 biochemistry & molecular biology, Cell Biology, NMR, CPMG, Carr-Purcell-Meiboom-Gill, 030104 developmental biology, chemistry, SARS CoV, NOESY

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b60e47e88e09080a1e830caa9e2dc685Test
https://doi.org/10.1016/j.bbamem.2017.10.015Test

المؤلفون: Christopher James Langmead, Bruce Randall Donald

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://www.cs.dartmouth.edu/reports/TR2004-494.pdfTest.

مصطلحات موضوعية: amide proton, NOE, nuclear Overhauser effect, NOESY nuclear Overhauser effect spectroscopy, dNN

وصف الملف: application/pdf

العلاقة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.210.5162Test; http://www.cs.dartmouth.edu/reports/TR2004-494.pdfTest

الإتاحة: http://www.cs.dartmouth.edu/reports/TR2004-494.pdfTest

المؤلفون: Maria J. Maté, Detlef Bentrop, Bruno Canard, Sofia-Antigoni Tsatsouli, Efstathios Melekis, Nicolas Papageorgiou, Georgios A. Spyroulias, Aikaterini C. Tsika, Bruno Coutard

المساهمون: Department of Pharmacy [Patras, Greece], University of Patras [Patras], Architecture et fonction des macromolécules biologiques (AFMB), Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Institut National de la Recherche Agronomique (INRA), Unité des Virus Emergents (UVE), Aix Marseille Université (AMU)-Institut de Recherche pour le Développement (IRD)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institute of Physiology II [Freiburg, Germany] (Faculty of Medicine), University of Freiburg [Freiburg], CCSD, Accord Elsevier, University of Patras, Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Institut National de la Santé et de la Recherche Médicale (INSERM)

المصدر: Journal of Molecular Biology
Journal of Molecular Biology, Elsevier, 2019, 431 (12), pp.2283-2297. ⟨10.1016/j.jmb.2019.04.013⟩
Journal of Molecular Biology, 2019, 431 (12), pp.2283-2297. ⟨10.1016/j.jmb.2019.04.013⟩

مصطلحات موضوعية: Models, Molecular, EMSA, electrophoretic mobility shift assay, ss(+) RNA, positive-sense single-stranded RNA, Viral Nonstructural Proteins, medicine.disease_cause, chemistry.chemical_compound, Macro domain, 0302 clinical medicine, NAD, nicotinamide adenine dinucleotide, Structural Biology, Togaviridae, [SDV.MP.VIR] Life Sciences [q-bio]/Microbiology and Parasitology/Virology, Genetics, 0303 health sciences, biology, [SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], Nucleotides, ITC, isothermal titration calorimetry, MD, macro domain, HSQC, heteronuclear single quantum coherence, Ligand (biochemistry), 3. Good health, [SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM], [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology, ADP-ribose, Protein Binding, ADP-r, adenosine diphosphate ribose, ATP, adenosine triphosphate, [SDV.BBM.BS] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], Viral protein, VEEV, Venezuelan Equine Encephalitis virus, Alphavirus, NOESY, nuclear Overhauser effect spectroscopy, MAYV, Mayaro virus, Article, 03 medical and health sciences, Togaviridae Infections, Protein Domains, medicine, Humans, Molecular Biology, Binding selectivity, 030304 developmental biology, Adenosine Diphosphate Ribose, Adenosine diphosphate ribose, RNA, biology.organism_classification, CHIKV, Chikungunya virus, CSP, chemical shift perturbation, Mayaro virus, ADP, adenosine diphosphate, chemistry, AMP, adenosine monophosphate, SINV, Sindbis virus, macro domain, 030217 neurology & neurosurgery

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1ee107b6ffcceffcebfc8ced21f4d668Test
https://www.hal.inserm.fr/inserm-02416971/file/S0022283619302074.pdfTest

المؤلفون: Andrea D. Lipińska, Małgorzata Graul, Magdalena J. Ślusarz, Sylwia Rodziewicz-Motowidło, Emilia Sikorska, Igor Zhukov, Franciszek Kasprzykowski, Natalia Karska

المصدر: Biochimica et Biophysica Acta. Biomembranes

مصطلحات موضوعية: 0301 basic medicine, Circular dichroism, BHV, Viral protein, Protein Conformation, Biophysics, Peptide, NOESY, nuclear Overhauser effect spectroscopy, TAV, time averaged, Molecular Dynamics Simulation, Molecular dynamics, medicine.disease_cause, Major histocompatibility complex, Cytoplasmic part, Biochemistry, Article, 03 medical and health sciences, Viral Proteins, Viral Envelope Proteins, N.BHV, N-terminal fragment of UL49.5, DPC, dodecylphosphocholine, medicine, Animals, POPC, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine, MRME, mean residue molar ellipticity, NMR, nuclear magnetic resonance, NOE, nuclear Overhauser effect, TAP, transporter associated with antigen processing, Nuclear Magnetic Resonance, Biomolecular, CD, circular dichroism, chemistry.chemical_classification, TMC.BHV, transmembrane–C-terminal fragment of UL49.5, 030102 biochemistry & molecular biology, biology, Cell Biology, Transporter associated with antigen processing, Nuclear magnetic resonance spectroscopy, MD, molecular dynamics, Transmembrane protein, 030104 developmental biology, chemistry, Molecular docking, biology.protein, NMR structure, Cattle, BHV, bovine herpesvirus, UL49.5 viral protein, TAP

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a3a1cd809be405f2e3e8ac485b4b34c9Test
https://pubmed.ncbi.nlm.nih.gov/30772281Test

المؤلفون: Ian Roberts, Andrew Almond, Javad Shakeri, Benedict M. Sattelle

المصدر: Carbohydrate Research

مصطلحات موضوعية: Models, Molecular, HA, hyaluronan, Magnetic Resonance Spectroscopy, K4 polysaccharide, GlcNAc, N-acetyl-d-glucosamine, GAG, glycosaminoglycan, 01 natural sciences, Biochemistry, Analytical Chemistry, Glycosaminoglycan, chemistry.chemical_compound, Sulfation, CS, chondriotin sulfate, Carbohydrate Conformation, Hyaluronic Acid, chemistry.chemical_classification, 0303 health sciences, Hydrogen bond, Sulfates, CN, chondroitin (unsulfated), Chondroitin Sulfates, Temperature, General Medicine, Nuclear magnetic resonance spectroscopy, HSQC, heteronuclear single quantum coherence, 3. Good health, Carbohydrate conformation, GlcA, d-glucuronic acid, Chondroitin, COSY, correlation spectroscopy, Chondroitin sulfate, Stereochemistry, HMBC, heteronuclear multiple bond coherence, NOESY, nuclear Overhauser effect spectroscopy, 010402 general chemistry, Article, 03 medical and health sciences, Conformation, NMR, nuclear magnetic resonance, 030304 developmental biology, ComputingMethodologies_COMPUTERGRAPHICS, Organic Chemistry, PG, proteoglycan, Glycosidic bond, 15N-isotope incorporation, NMR, 0104 chemical sciences, carbohydrates (lipids), chemistry, Drug Design, CSPG, CS proteoglycan, PDB, Protein data bank, GalNAc, N-acetyl-d-galactosamine

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a00efa94b8740160532641506395c344Test
http://europepmc.org/articles/PMC3098369Test

المؤلفون: Surajit Bhattacharjya, Mukesh Mahajan

المساهمون: School of Biological Sciences

المصدر: Biochimica et Biophysica Acta. Biomembranes

مصطلحات موضوعية: Models, Molecular, Protein subunit, Detergents, Molecular Sequence Data, Biophysics, NOESY, nuclear Overhauser effect spectroscopy, TOCSY, total correlation spectroscopy, Membrane Fusion, Biochemistry, Micelle, Protein Structure, Secondary, Article, Fusion peptide, Humans, Protein Interaction Domains and Motifs, Amino Acid Sequence, FP, fusion peptide, DPC, dodecyl phosphocholine, NMR, nuclear magnetic resonance, Nuclear Magnetic Resonance, Biomolecular, Cell fusion, Micelles, Fusion, Chemistry, Structure, Lipid bilayer fusion, SARS-CoV, Cell Biology, Fusion protein, NMR, Science::Biological sciences [DRNTU], Crystallography, Membrane, Severe acute respiratory syndrome-related coronavirus, Thermodynamics, SARS-CoV, severe acute respiratory syndrome-associated coronavirus AMPs, Viral Fusion Proteins, Fusion mechanism

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f84b337f12257b988e20f3c9b8197ae7Test
https://hdl.handle.net/10356/107413Test

المؤلفون: Fabio C. L. Almeida, Ana Paula Valente, Andrea T. Da Poian, Miguel A. R. B. Castanho, Ronaldo Mohana-Borges, Francisco J.R. Sousa, Fabiana A. Carneiro, Manuel N. Melo

المساهمون: Repositório da Universidade de Lisboa

المصدر: Journal of Molecular Biology
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP

مصطلحات موضوعية: Protein Conformation, membrane fusion, Peptide, PG, phosphatidylglycerol, Dengue virus, chemistry.chemical_compound, PC, phosphatidylcholine, Protein structure, Fusion peptide, Structural Biology, Transfer NOE, Micelles, Phospholipids, chemistry.chemical_classification, 0303 health sciences, Vesicle, 030302 biochemistry & molecular biology, E, envelope glycoprotein, PS, phosphatidylserine, 3. Good health, HIV, human immunodeficiency virus, Membrane, Rh-PE, N-(lissamine Rhodamine B sulfonyl) phosphatidylethanolamine, DV, dengue virus, Two-dimensional nuclear magnetic resonance spectroscopy, Protein Binding, Static Electricity, Membrane fusion, NOESY, nuclear Overhauser effect spectroscopy, NBD-PE, N-(7-nitro-2,1,3-benzoxadiazol-4-yl) phosphatidylethanolamine, TOCSY, total correlation spectroscopy, PE, phosphatidylethanolamine, Article, transfer NOE, Hydrophobic effect, 03 medical and health sciences, Membrane Lipids, DPC, dodecylphosphocholine, Molecular Biology, Nuclear Magnetic Resonance, Biomolecular, Unilamellar Liposomes, 030304 developmental biology, Phosphatidylglycerol, dengue virus, 3D, three-dimensional, Lipid bilayer fusion, NMR, Crystallography, chemistry, NOE, nuclear Overhauser enhancement, Biophysics, fusion peptide, LUV, large unilamellar vesicle, Peptides, Viral Fusion Proteins

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d5097cb2838261ff68e8e18cabebe29Test
https://pubmed.ncbi.nlm.nih.gov/19619560Test