المؤلفون: Marnef, Aline, Legube, Gaëlle

المساهمون: Unité de biologie Moléculaire, Cellulaire et du Développement (MCD), Centre de Biologie Intégrative (CBI), Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS), ANR-14-CE10-0002,DIvA,Fonction de la chromatine dans la réparation des DSBs.(2014), European Project: 647344,H2020,ERC-2014-CoG,DIvA(2015)

المصدر: ISSN: 1465-7392.

مصطلحات موضوعية: MESH: DNA / ultrastructure, MESH: DNA Repair / genetics, MESH: R-Loop Structures / genetics, MESH: Saccharomyces cerevisiae / genetics, [SDV.BC]Life Sciences [q-bio]/Cellular Biology

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/33837288; info:eu-repo/grantAgreement//647344/EU/Chromatin function in DNA Double Strand breaks repair: Prime, repair and restore DSB Inducible via AsiSI/DIvA; hal-04125277; https://ut3-toulouseinp.hal.science/hal-04125277Test; https://ut3-toulouseinp.hal.science/hal-04125277/documentTest; https://ut3-toulouseinp.hal.science/hal-04125277/file/Marnef%202021.pdfTest; PUBMED: 33837288

الإتاحة: https://doi.org/10.1038/s41556-021-00663-4Test
https://ut3-toulouseinp.hal.science/hal-04125277Test
https://ut3-toulouseinp.hal.science/hal-04125277/documentTest
https://ut3-toulouseinp.hal.science/hal-04125277/file/Marnef%202021.pdfTest

المؤلفون: Luzarowski, Marcin, Vicente, Rubén, Kiselev, Andrei, Wagner, Mateusz, Schlossarek, Dennis, Erban, Alexander, de Souza, Leonardo, Perez, Childs, Dorothee, Wojciechowska, Izabela, Luzarowska, Urszula, Górka, Michał, Sokołowska, Ewelina, M, Kosmacz, Monika, Moreno, Juan, C, Brzezińska, Aleksandra, Vegesna, Bhavana, Kopka, Joachim, Fernie, Alisdair, R, Willmitzer, Lothar, Ewald, Jennifer, C, Skirycz, Aleksandra

المساهمون: Department of Molecular Physiology Potsdam-Golm, Max Planck Institute of Molecular Plant Physiology (MPI-MP), Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, Max-Planck-Gesellschaft, Laboratoire de Recherche en Sciences Végétales (LRSV), Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT), University of Wrocław Poland (UWr), European Molecular Biology Laboratory Heidelberg (EMBL), Ben-Gurion University of the Negev (BGU), King Abdullah University of Science and Technology Saudi Arabia (KAUST), Eberhard Karls Universität Tübingen = Eberhard Karls University of Tuebingen, Boyce Thompson Institute Ithaca, Open Access funding enabled and organized by Projekt DEAL

المصدر: ISSN: 2399-3642 ; Communications Biology ; https://ut3-toulouseinp.hal.science/hal-03407664Test ; Communications Biology, 2021, 4 (1), 15 p. ⟨10.1038/s42003-021-01684-3⟩.

مصطلحات موضوعية: Enzymes, Mass spectrometry, Metabolomics, Proteins, MESH: Energy Metabolism, MESH: Glycolysis, MESH: Protein Interaction Maps, MESH: Proteolysis, MESH: Proteome, MESH: Proteomics, MESH: Saccharomyces cerevisiae / enzymology, MESH: Saccharomyces cerevisiae / genetics, MESH: Saccharomyces cerevisiae Proteins / genetics, MESH: Saccharomyces cerevisiae Proteins / metabolism, MESH: Metabolome, MESH: Metabolomics, MESH: Phosphoglycerate Kinase / genetics, MESH: Phosphoglycerate Kinase / metabolism, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/33568709; hal-03407664; https://ut3-toulouseinp.hal.science/hal-03407664Test; https://ut3-toulouseinp.hal.science/hal-03407664/documentTest; https://ut3-toulouseinp.hal.science/hal-03407664/file/Luzarowski_2021.pdfTest; PUBMED: 33568709; PUBMEDCENTRAL: PMC7876005

الإتاحة: https://doi.org/10.1038/s42003-021-01684-3Test
https://ut3-toulouseinp.hal.science/hal-03407664Test
https://ut3-toulouseinp.hal.science/hal-03407664/documentTest
https://ut3-toulouseinp.hal.science/hal-03407664/file/Luzarowski_2021.pdfTest

المؤلفون: Wallace, Edward, W J, Maufrais, Corinne, Sales-Lee, Jade, Tuck, Laura, R, de Oliveira, Luciana, Feuerbach, Frank, Moyrand, Frederique, Natarajan, Prashanthi, Madhani, Hiten, D, Janbon, Guilhem

المساهمون: Centre for Synthetic and Systems Biology (Ssynthsys), University of Edinburgh (Edin.), Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Biologie des ARN des Pathogènes fongiques - RNA Biology of Fungal Pathogens, Institut Pasteur Paris (IP), Department of Biochemistry and Biophysics San Francisco, University of California (UC), Génétique des Interactions macromoléculaires / Genetics of Macromolecular Interactions, Chan Zuckerberg BioHub San Francisco, CA, This work in the Madhani lab was supported by grants from the US National Institutes of Health R01AI120464, R01GM71801 to H.D.M., H.D.M. is an Investigator of the Chan-Zuckerberg Biohub, E.W.J.W. is a Sir Henry Dale Fellow, supported by a Sir Henry Dale Fellowship jointly funded by the Wellcome Trust and the Royal Society 208779/Z/17/Z, L.T. is supported by a Wellcome-University of Edinburgh ISSF3 award, This work in the Janbon lab was supported by an Infect-ERA grant (project Cryptoview). Funding for open access charge: University of Edinburgh., We thank members of the Wallace, Janbon, and Madhani labs for helpful discussions and comments on the manuscript. We thank Juan Mata for sharing intermediate data related to (59). We are grateful to J. Weissman (UCSF) for advice on ribosome profiling. We thank three anonymous reviewers for their helpful comments.

المصدر: ISSN: 0305-1048.

مصطلحات موضوعية: MESH: Amino Acyl-tRNA Synthetases / genetics, MESH: Amino Acyl-tRNA Synthetases / metabolism, MESH: Genome, Fungal, MESH: Neurospora crassa / genetics, MESH: Neurospora crassa / metabolism, MESH: Open Reading Frames, MESH: Peptide Chain Initiation, Translational, MESH: Saccharomyces cerevisiae / genetics, MESH: Saccharomyces cerevisiae / metabolism, MESH: Schizosaccharomyces / genetics, MESH: Schizosaccharomyces / metabolism, MESH: Species Specificity, MESH: Candida albicans / genetics, MESH: Candida albicans / metabolism, MESH: Chromosome Mapping, MESH: Codon, Initiator / chemistry, Initiator / metabolism, MESH: Cryptococcus / genetics, MESH: Cryptococcus / metabolism, MESH: Gene Expression Regulation, [SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology, [SDV.GEN]Life Sciences [q-bio]/Genetics

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/32020195; pasteur-02651962; https://pasteur.hal.science/pasteur-02651962Test; https://pasteur.hal.science/pasteur-02651962/documentTest; https://pasteur.hal.science/pasteur-02651962/file/Wallace%20et%20al%20NAR%202020.pdfTest; PUBMED: 32020195; PUBMEDCENTRAL: PMC7049704

الإتاحة: https://doi.org/10.1093/nar/gkaa060Test
https://pasteur.hal.science/pasteur-02651962Test
https://pasteur.hal.science/pasteur-02651962/documentTest
https://pasteur.hal.science/pasteur-02651962/file/Wallace%20et%20al%20NAR%202020.pdfTest

المؤلفون: Nevers, Alicia, Doyen, Antonia, Malabat, Christophe, Néron, Bertrand, Kergrohen, Thomas, Jacquier, Alain, Badis, Gwenaël

المساهمون: Génétique des Interactions macromoléculaires / Genetics of Macromolecular Interactions, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Université Pierre et Marie Curie - Paris 6 (UPMC), Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI), Génétique des génomes - Genetics of Genomes (UMR 3525), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Institut Pasteur Paris (IP), Pasteur Institute, the Centre National de la Recherche Scientifique and the Agence Nationale pour la Recherche ANR-14-CE-10-0014-01, 2014, A.N. received Fellowships from the French Ministry of Research and from the Fondation pour la Recherche Médicale FDT20160435375, 2016 . Funding for open access charge: Agence Nationale pour la Recherche ANR-14-CE-10-0014-01, 2014 ., We thank Frank Feuerbach for providing strains LMA2811 and LMA2819. We thank Bernard Turcotte, Cosmin Saveanu and Micheline Fromont-Racine for discussions and critical reading of the manuscript. We acknowledge Jean Yves Coppee and Caroline Proux for the facilities and expertise of the Transcriptomic Platform (PF2) for cDNA libraries sequencing.

المصدر: ISSN: 0305-1048.

مصطلحات موضوعية: MESH: Gene Deletion, MESH: Gene Expression Regulation, Fungal, MESH: RNA Helicases/genetics, MESH: RNA Polymerase II/metabolism, MESH: RNA, Antisense/biosynthesis, MESH: Saccharomyces cerevisiae/genetics, MESH: Saccharomyces cerevisiae/metabolism, MESH: Saccharomyces cerevisiae Proteins/genetics, MESH: Transcription Initiation Site, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/29788449; hal-02349600; https://hal.science/hal-02349600Test; https://hal.science/hal-02349600/documentTest; https://hal.science/hal-02349600/file/17-Nevers-NAR%202018.pdfTest; PUBMED: 29788449; PUBMEDCENTRAL: PMC6158615

الإتاحة: https://doi.org/10.1093/nar/gky342Test
https://hal.science/hal-02349600Test
https://hal.science/hal-02349600/documentTest
https://hal.science/hal-02349600/file/17-Nevers-NAR%202018.pdfTest

المؤلفون: Dennis Schlossarek, Dorothee Childs, Mateusz Wagner, Alexander Erban, Joachim Kopka, Juan Moreno, Urszula Luzarowska, Izabela Wojciechowska, Leonardo Perez de Souza, Rubén Vicente, Monika Kosmacz, Michal Gorka, Aleksandra Skirycz, Bhavana Vegesna, Aleksandra Brzezińska, Andrei Kiselev, Ewelina M. Sokolowska, Jennifer C. Ewald, Marcin Luzarowski, Lothar Willmitzer, Alisdair R. Fernie

المساهمون: Department of Molecular Physiology [Potsdam-Golm], Max Planck Institute of Molecular Plant Physiology (MPI-MP), Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, Max-Planck-Gesellschaft, Laboratoire de Recherche en Sciences Végétales (LRSV), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées, University of Wrocław [Poland] (UWr), European Molecular Biology Laboratory [Heidelberg] (EMBL), Ben-Gurion University of the Negev (BGU), King Abdullah University of Science and Technology (KAUST), Eberhard Karls Universität Tübingen = Eberhard Karls University of Tuebingen, Boyce Thompson Institute [Ithaca], Open Access funding enabled and organized by Projekt DEAL

المصدر: Communications Biology
Communications Biology, Nature Publishing Group, 2021, 4 (1), 15 p. ⟨10.1038/s42003-021-01684-3⟩
Communications Biology, Vol 4, Iss 1, Pp 1-15 (2021)

مصطلحات موضوعية: Proteomics, Proteome, Medicine (miscellaneous), MESH: Phosphoglycerate Kinase / genetics, MESH: Energy Metabolism, Interactome, chemistry.chemical_compound, 0302 clinical medicine, Protein Interaction Maps, Biology (General), MESH: Metabolomics, MESH: Protein Interaction Maps, MESH: Saccharomyces cerevisiae / enzymology, chemistry.chemical_classification, 0303 health sciences, biology, MESH: Proteomics, Small molecule, Enzymes, MESH: Proteome, Biochemistry, MESH: Glycolysis, Metabolome, MESH: Saccharomyces cerevisiae Proteins / metabolism, General Agricultural and Biological Sciences, Glycolysis, MESH: Metabolome, MESH: Phosphoglycerate Kinase / metabolism, Saccharomyces cerevisiae Proteins, QH301-705.5, Saccharomyces cerevisiae, MESH: Proteolysis, MESH: Saccharomyces cerevisiae Proteins / genetics, Protein degradation, Article, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, Phosphoglycerate kinase activity, Metabolomics, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology, 030304 developmental biology, Phosphoglycerate kinase, Dipeptide, Mass spectrometry, Proteins, biology.organism_classification, MESH: Saccharomyces cerevisiae / genetics, Phosphoglycerate Kinase, Enzyme, chemistry, Proteolysis, Energy Metabolism, 030217 neurology & neurosurgery

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::88d74a7a22f23f1e3250092622abb758Test
https://doi.org/10.1038/s42003-021-01684-3Test

المؤلفون: Marie-Nelly, Hervé, Marbouty, Martial, Cournac, Axel, Flot, Jean-François, Liti, Gianni, Poggi-Parodi, Dante, Syan, Sylvie, Guillén, Nancy, Margeot, Antoine, Zimmer, Christophe, Koszul, Romain

المساهمون: Imagerie et Modélisation, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Université Pierre et Marie Curie - Paris 6 (UPMC), Régulation spatiale des Génomes - Spatial Regulation of Genomes, Génétique des génomes - Genetics of Genomes (UMR 3525), Group Biological Physics and Evolutionary Dynamics, Max Planck Institute for Dynamics and Self-Organization (MPIDS), Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, Institut de Recherche sur le Cancer et le Vieillissement (IRCAN), Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UniCA), IFP Energies nouvelles (IFPEN), Biologie Cellulaire du Parasitisme, Institut Pasteur Paris (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), This research was supported by funding to R.K. from the European Research Council under the 7th Framework Program (FP7/2007-2013)/ERC grant agreement 260822 and by the Agence Nationale de la Recherche to C.Z. (ANR-09-PIRI-0024 and ANR-11-MONU-020-02) and R.K. (ANR-09-PIRI-0024 ) H.M.-N. was also supported by a fellowship from the Fondation pour la Recherche Médicale (FRM). M.M. is the recipient of a fellowship from the Association pour la Recherche sur le Cancer (20100600373). J.-F.F. is supported by the European Research Council (ERC-2012-AdG 322790)., We thank Julien Mozziconacci, Emmanuelle Fabre and members of the RSG and IM laboratories for fruitful discussions. We thank Jean-Yves Coppée and Caroline Proux from the PF2 at the IP Genopole for technical help regarding sequencing.

المصدر: ISSN: 2041-1723.

مصطلحات موضوعية: Genomics, Genome informatics, Genome assembly algorithms, MESH: Algorithms, MESH: Chromosomes, Fungal, MESH: Humans, MESH: Karyotype, MESH: Models, Statistical, MESH: Saccharomyces cerevisiae/genetics, MESH: Sequence Analysis, DNA, MESH: Trichoderma/genetics, Human, MESH: Contig Mapping/methods, MESH: Contig Mapping/statistics & numerical data, MESH: Genome, MESH: High-Throughput Nucleotide Sequencing, [CHIM.POLY]Chemical Sciences/Polymers, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/25517223; hal-01138788; https://hal.science/hal-01138788Test; https://hal.science/hal-01138788/documentTest; https://hal.science/hal-01138788/file/0024535-03.pdfTest; PUBMED: 25517223; PUBMEDCENTRAL: PMC4284522

الإتاحة: https://doi.org/10.1038/ncomms6695Test
https://hal.science/hal-01138788Test
https://hal.science/hal-01138788/documentTest
https://hal.science/hal-01138788/file/0024535-03.pdfTest

المؤلفون: Marbouty, Martial, Ermont, Caroline, Dujon, Bernard, Richard, Guy-Franck, Koszul, Romain

المساهمون: Régulation spatiale des Génomes - Spatial Regulation of Genomes, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Génétique Moléculaire des Levures, Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), European Research Council. Grant Numbers: FP7/2007-2013, 260822 Association pour la Recherche sur le Cancer fellowship. Grant Number: 20100600373, European Project: 260822,EC:FP7:ERC,ERC-2010-StG_20091118,DICIG(2011)

المصدر: ISSN: 0749-503X.

مصطلحات موضوعية: yeast, elutriation, replication, synchronization, Ascomyceta, daughter cells, MESH: Cell Division, MESH: Centrifugation/methods, MESH: G1 Phase, MESH: Mycology/methods, MESH: Saccharomyces cerevisiae/cytology, MESH: Saccharomyces cerevisiae/genetics, MESH: Saccharomyces cerevisiae/isolation & purification, MESH: Yeasts/cytology, MESH: Yeasts/genetics, MESH: Yeasts/isolation & purification, [SDV.GEN]Life Sciences [q-bio]/Genetics

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/24604765; info:eu-repo/grantAgreement/EC/FP7/260822/EU/Dynamic Interplay between Eukaryotic Chromosomes: Impact on Genome Stability/DICIG; pasteur-01420008; https://pasteur.hal.science/pasteur-01420008Test; https://pasteur.hal.science/pasteur-01420008/documentTest; https://pasteur.hal.science/pasteur-01420008/file/Marbouty%20et%20al%20Yeast%202012.pdfTest; PUBMED: 24604765

الإتاحة: https://doi.org/10.1002/yea.3005Test
https://pasteur.hal.science/pasteur-01420008Test
https://pasteur.hal.science/pasteur-01420008/documentTest
https://pasteur.hal.science/pasteur-01420008/file/Marbouty%20et%20al%20Yeast%202012.pdfTest

المؤلفون: Frédérique Moyrand, Prashanthi Natarajan, Guilhem Janbon, Jade Sales-Lee, Laura R. Tuck, Frank Feuerbach, Wallace Ewj, Luciana de Oliveira, Hiten D. Madhani, Corinne Maufrais

المساهمون: Centre for Synthetic and Systems Biology (Ssynthsys), University of Edinburgh, Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Biologie des ARN des Pathogènes fongiques - RNA Biology of Fungal Pathogens, Institut Pasteur [Paris] (IP), Department of Biochemistry and Biophysics [San Francisco], University of California (UC), Génétique des Interactions macromoléculaires / Genetics of Macromolecular Interactions, Chan Zuckerberg BioHub [San Francisco, CA], This work in the Madhani lab was supported by grants from the US National Institutes of Health [R01AI120464, R01GM71801 to H.D.M.], H.D.M. is an Investigator of the Chan-Zuckerberg Biohub, E.W.J.W. is a Sir Henry Dale Fellow, supported by a Sir Henry Dale Fellowship jointly funded by the Wellcome Trust and the Royal Society [208779/Z/17/Z], L.T. is supported by a Wellcome-University of Edinburgh ISSF3 award, This work in the Janbon lab was supported by an Infect-ERA grant (project Cryptoview). Funding for open access charge: University of Edinburgh., We thank members of the Wallace, Janbon, and Madhani labs for helpful discussions and comments on the manuscript. We thank Juan Mata for sharing intermediate data related to (59). We are grateful to J. Weissman (UCSF) for advice on ribosome profiling. We thank three anonymous reviewers for their helpful comments., Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Institut Pasteur [Paris], University of California, Génétique des Interactions macromoléculaires

المصدر: Wallace, E W J, Maufrais, C, Sales Lee, J, Tuck, L, de Oliveira, L, Feuerbach, F, Moyrand, F, Natarajan, P, Madhani, H D & Janbon, G 2020, ' Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom ', Nucleic Acids Research, vol. 48, no. 5, pp. 2312-2331 . https://doi.org/10.1093/nar/gkaa060Test
Nucleic Acids Research
Nucleic Acids Research, 2020, 48 (5), pp.2312-2331. ⟨10.1093/nar/gkaa060⟩
Nucleic Acids Research, Oxford University Press, 2020, 48 (5), pp.2312-2331. ⟨10.1093/nar/gkaa060⟩

مصطلحات موضوعية: Kozak consensus sequence, Codon, Initiator, MESH: Gene Expression Regulation, Fungal, MESH: Saccharomyces cerevisiae / metabolism, Ribosome, 0302 clinical medicine, Start codon, Gene Expression Regulation, Fungal, MESH: Neurospora crassa / metabolism, Candida albicans, MESH: Schizosaccharomyces / metabolism, Peptide Chain Initiation, Translational, [SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology, Genetics, 0303 health sciences, Chromosome Mapping, Translation (biology), MESH: Codon, Initiator / chemistry, MESH: Candida albicans / genetics, Transfer RNA, Genome, Fungal, MESH: Genome, Fungal, MESH: Codon, Initiator / metabolism, MESH: Peptide Chain Initiation, Translational, Context (language use), Saccharomyces cerevisiae, Data Resources and Analyses, MESH: Amino Acyl-tRNA Synthetases / genetics, Biology, Amino Acyl-tRNA Synthetases, Open Reading Frames, 03 medical and health sciences, Species Specificity, Schizosaccharomyces, MESH: Neurospora crassa / genetics, MESH: Species Specificity, Gene, MESH: Cryptococcus / metabolism, 030304 developmental biology, [SDV.GEN]Life Sciences [q-bio]/Genetics, Neurospora crassa, MESH: Schizosaccharomyces / genetics, MESH: Cryptococcus / genetics, MESH: Open Reading Frames, MESH: Saccharomyces cerevisiae / genetics, Cryptococcus, Open reading frame, MESH: Amino Acyl-tRNA Synthetases / metabolism, MESH: Chromosome Mapping, MESH: Candida albicans / metabolism, 030217 neurology & neurosurgery

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bf61a7e41b710769c98f2c49ddc7d2bfTest
https://www.pure.ed.ac.uk/ws/files/133847580/gkaa060.pdfTest

المؤلفون: Wong, Hua, Marie-Nelly, Hervé, Herbert, Sébastien, Carrivain, Pascal, Blanc, Hervé, Koszul, Romain, Fabre, Emmanuelle, Zimmer, Christophe

المساهمون: GDR 3536, Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Imagerie et Modélisation, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Cellule Pasteur UPMC, Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut Pasteur Paris (IP), Cellule Pasteur, Université Paris Diderot - Paris 7 (UPD7)-PRES Sorbonne Paris Cité, Laboratoire de Physique Théorique de la Matière Condensée (LPTMC), Régulation spatiale des Génomes - Spatial Regulation of Genomes, This work was funded by Institut Pasteur, Agence Nationale de la Recherche (grants ANR-09-PIRI-0024-1 and ANR-11-MONU-020-02), and Fondation pour la Recherche Médicale (Equipe FRM)., ANR-09-PIRI-0024,Chromodyn(2009), ANR-11-MONU-0020,ProbAlg,Algorithmes efficients pour modèles réalistes à grand échelle : développements fondamentaux et applications(2011)

المصدر: ISSN: 0960-9822.

مصطلحات موضوعية: MESH: Cell Nucleus/genetics, MESH: Cell Nucleus/physiology, MESH: Sequence Analysis, DNA, MESH: Transcription, Genetic, MESH: Cell Nucleus/ultrastructure, MESH: Chromatin, MESH: Chromosomes, Fungal, MESH: Computational Biology/methods, MESH: Computer Simulation, MESH: DNA Replication, MESH: Interphase, MESH: Nucleolus Organizer Region/physiology, MESH: Saccharomyces cerevisiae/genetics, MESH: Saccharomyces cerevisiae/physiology, MESH: Saccharomyces cerevisiae/ultrastructure, [SDV.GEN]Life Sciences [q-bio]/Genetics

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/22940469; pasteur-01420017; https://pasteur.hal.science/pasteur-01420017Test; https://pasteur.hal.science/pasteur-01420017/documentTest; https://pasteur.hal.science/pasteur-01420017/file/Wong%20et%20al%202012%20Curr%20Bio.pdfTest; PUBMED: 22940469

الإتاحة: https://doi.org/10.1016/j.cub.2012.07.069Test
https://pasteur.hal.science/pasteur-01420017Test
https://pasteur.hal.science/pasteur-01420017/documentTest
https://pasteur.hal.science/pasteur-01420017/file/Wong%20et%20al%202012%20Curr%20Bio.pdfTest

المؤلفون: Antonia Doyen, Alicia Nevers, Christophe Malabat, Bertrand Néron, Gwenael Badis, Thomas Kergrohen, Alain Jacquier

المساهمون: Génétique des Interactions macromoléculaires, Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris], Université Pierre et Marie Curie - Paris 6 (UPMC), Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI), Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Pasteur Institute, the Centre National de la Recherche Scientifique and the Agence Nationale pour la Recherche [ANR-14-CE-10-0014-01, 2014], A.N. received Fellowships from the French Ministry of Research and from the Fondation pour la Recherche Médicale [FDT20160435375, 2016]. Funding for open access charge: Agence Nationale pour la Recherche [ANR-14-CE-10-0014-01, 2014]., We thank Frank Feuerbach for providing strains LMA2811 and LMA2819. We thank Bernard Turcotte, Cosmin Saveanu and Micheline Fromont-Racine for discussions and critical reading of the manuscript. We acknowledge Jean Yves Coppee and Caroline Proux for the facilities and expertise of the Transcriptomic Platform (PF2) for cDNA libraries sequencing., Génétique des Interactions macromoléculaires / Genetics of Macromolecular Interactions, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Génétique des génomes - Genetics of Genomes (UMR 3525), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Institut Pasteur [Paris] (IP)

المصدر: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2018, 46 (12), pp.6009-6025. ⟨10.1093/nar/gky342⟩
Nucleic Acids Research, 2018, 46 (12), pp.6009-6025. ⟨10.1093/nar/gky342⟩

مصطلحات موضوعية: 0301 basic medicine, Saccharomyces cerevisiae Proteins, Mutant, MESH: Gene Expression Regulation, Fungal, Saccharomyces cerevisiae, Biology, Transcriptome, 03 medical and health sciences, 0302 clinical medicine, MESH: Saccharomyces cerevisiae/metabolism, Transcription (biology), Gene Expression Regulation, Fungal, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], Sense (molecular biology), Gene expression, medicine, Genetics, RNA, Antisense, RNA, Messenger, MESH: RNA Polymerase II/metabolism, Gene, Psychological repression, 030304 developmental biology, Regulation of gene expression, MESH: Saccharomyces cerevisiae/genetics, 0303 health sciences, Messenger RNA, MESH: RNA Helicases/genetics, 030302 biochemistry & molecular biology, Gene regulation, Chromatin and Epigenetics, Promoter, medicine.disease, Chromatin, Cell biology, MESH: RNA, Antisense/biosynthesis, MESH: Saccharomyces cerevisiae Proteins/genetics, 030104 developmental biology, MESH: Gene Deletion, RNA Polymerase II, MESH: Transcription Initiation Site, Transcription Initiation Site, Transcriptional noise, 030217 neurology & neurosurgery, Gene Deletion, RNA Helicases

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6025e7be12b7d285ac756d69d1201269Test
https://hal.archives-ouvertes.fr/hal-02349600Test