المؤلفون: Despres, Jordane, Forano, Evelyne, Lepercq, Pascale, Comtet-Marre, Sophie, Jubelin, Grégory, Yeoman, Carl J., Miller, Margret E. Berg, Fields, Christopher J., Terrapon, Nicolas, Le Bourvellec, Carine, Renard, Catherine M. G. C., Henrissat, Bernard, White, Bryan A., Mosoni, Pascale

المساهمون: SECurité des ALIments et Microbiologie (SECALIM), Institut National de la Recherche Agronomique (INRA)-École nationale vétérinaire, agroalimentaire et de l'alimentation Nantes-Atlantique (ONIRIS), Architecture et fonction des macromolécules biologiques (AFMB), Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Sécurité et Qualité des Produits d'Origine Végétale (SQPOV), Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)

المصدر: ISSN: 1471-2164 ; BMC Genomics ; https://hal.science/hal-01439085Test ; BMC Genomics, 2016, 17 (1), pp.147. ⟨10.1186/s12864-016-2472-1⟩.

مصطلحات موضوعية: RNA-seq, Mutagenesis, Pectin degradation, Human gut, Bacteroides, Polysaccharide-Utilization Locus, CAZymes, MESH: Bacteroides/genetics, MESH: Bacteroides/metabolism, MESH: Mutagenesis, MESH: Pectins/metabolism, MESH: RNA, MESH: Sequence Analysis, MESH: Bacterial/genetics, MESH: RNA/methods, MESH: Transcriptome, MESH: Substances, MESH: Citrus/chemistry, MESH: Dietary Fiber/metabolism, MESH: Genetic Loci, MESH: Malus/chemistry, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

العلاقة: hal-01439085; https://hal.science/hal-01439085Test; https://hal.science/hal-01439085/documentTest; https://hal.science/hal-01439085/file/12864_2016_Article_2472.pdfTest; PRODINRA: 348123; WOS: 000371594100009

الإتاحة: https://doi.org/10.1186/s12864-016-2472-1Test
https://hal.science/hal-01439085Test
https://hal.science/hal-01439085/documentTest
https://hal.science/hal-01439085/file/12864_2016_Article_2472.pdfTest

المؤلفون: da Re, Sandra, Valle, Jaione, Charbonnel, Nicolas, Beloin, Christophe, Latour-Lambert, Patricia, Faure, Philippe, Turlin, Evelyne, Le Bouguénec, Chantal, Renauld-Mongénie, Geneviève, Forestier, Christiane, Ghigo, Jean-Marc

المساهمون: Génétique des Biofilms, Institut Pasteur Paris (IP), Université d'Auvergne - Clermont-Ferrand I (UdA), Université Pierre et Marie Curie - Paris 6 (UPMC), Membranes bactériennes, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Biologie des Bactéries Pathogènes à Gram-positif, Sanofi Pasteur Marcy-l'Étoile, France, SDR was supported by Sanofi-Pasteur. JV was a Marie-Curie Fellow. This work was supported by grants from the Institut Pasteur, CNRS (Centre National de la Recherche Scientifique), URA (Unité de echerche Associée) 2172, the Network of Excellence EuroPathoGenomics, LSHB-CT-2005-512061, and the French Government's Investissement d'Avenir program, Laboratoire d'Excellence “Integrative Biology of Emerging Infectious Diseases” (grant n°ANR-10-LABX-62-IBEID)., We thank Perrine Vasseur for preliminary animal experiments, Christophe De Champs for his help in statistical analyses, and P. Trieu-Cuot and O. Poupel respectively, for kindly providing laboratory facilities and technical assistance for some of the RT-PCR analyses presented herein. We are grateful to M. Mourez for critical reading of the manuscript., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), European Project: 512061,Network of Excellence EuroPathoGenomics

المصدر: ISSN: 1932-6203.

مصطلحات موضوعية: MESH: *Biofilms, MESH: *Symbiosis, MESH: Species Specificity, MESH: Animals, MESH: Escherichia coli/*genetics/*physiology, MESH: Female, MESH: Genes, MESH: Bacterial/*genetics, MESH: Klebsiella pneumoniae/*physiology, MESH: Mice, MESH: Microbiota/genetics/physiology, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/23667443; info:eu-repo/grantAgreement//512061/EU/LSHB-CT-2005-512061/Network of Excellence EuroPathoGenomics; pasteur-01385430; https://pasteur.hal.science/pasteur-01385430Test; https://pasteur.hal.science/pasteur-01385430/documentTest; https://pasteur.hal.science/pasteur-01385430/file/journal.pone.0061628.PDFTest; PUBMED: 23667443; PUBMEDCENTRAL: PMC3646849

الإتاحة: https://doi.org/10.1371/journal.pone.0061628Test
https://pasteur.hal.science/pasteur-01385430Test
https://pasteur.hal.science/pasteur-01385430/documentTest
https://pasteur.hal.science/pasteur-01385430/file/journal.pone.0061628.PDFTest

المؤلفون: Sophie Comtet-Marre, Pascale Mosoni, Pascale Lepercq, Evelyne Forano, Carl J. Yeoman, Bryan A. White, Catherine M.G.C. Renard, Christopher J. Fields, Carine Le Bourvellec, Jordane Despres, Bernard Henrissat, Nicolas Terrapon, Grégory Jubelin, Margret E. Berg Miller

المساهمون: Microbiologie Equipe Qualité et Sécurité des Aliments (INRA), Institut National de la Recherche Agronomique (INRA), Architecture et fonction des macromolécules biologiques (AFMB), Institut National de la Recherche Agronomique (INRA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Sécurité et Qualité des Produits d'Origine Végétale (SQPOV), Institut National de la Recherche Agronomique (INRA)-Avignon Université (AU), Mosoni, Pascale, SECurité des ALIments et Microbiologie, Institut National de la Recherche Agronomique (INRA)-École nationale d'ingénieurs des techniques des industries agricoles et alimentaires (ENITIAA)-École nationale vétérinaire, agroalimentaire et de l'alimentation Nantes-Atlantique (ONIRIS), Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Institut National de la Recherche Agronomique (INRA)

المصدر: BMC Genomics
BMC Genomics, BioMed Central, 2016, 17, pp.147. ⟨10.1186/s12864-016-2472-1⟩
BMC Genomics, BioMed Central, 2016, 27 (17), ⟨10.1186/s12864-016-2758-3⟩
BMC Genomics 1 (17), 14 p.. (2016)
BMC Genomics, 2016, 17 (1), pp.147. ⟨10.1186/s12864-016-2472-1⟩
BMC Genomics, BioMed Central, 2016, 17 (1), pp.147. ⟨10.1186/s12864-016-2472-1⟩
BMC Genomics, 2016, 27 (17), ⟨10.1186/s12864-016-2758-3⟩

مصطلحات موضوعية: 0301 basic medicine, Dietary Fiber, MESH: RNA/methods, Citrus, Pectin, Mutant, Bacteroides xylanisolvens, RNA-Seq, Polysaccharide-Utilization Locus, Bacteroides, MESH: Substances, MESH: Mutagenesis, chemistry.chemical_classification, Genetics, 2. Zero hunger, [SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], digestive, oral, and skin physiology, food and beverages, Pectin degradation, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], MESH: Malus/chemistry, [SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM], RNA, Bacterial, Biochemistry, Malus, Pectins, Erratum, MESH: Bacterial/genetics, CAZymes, Research Article, Biotechnology, food.ingredient, 030106 microbiology, Mutagenesis (molecular biology technique), MESH: Pectins/metabolism, Genomics, Computational biology, Biology, Polysaccharide, Human gut, MESH: Genetic Loci, Microbiology, Cell wall, 03 medical and health sciences, MESH: Sequence Analysis, food, microbiote, MESH: RNA, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], Microbiome, pectine, Sequence Analysis, RNA, MESH: Bacteroides/metabolism, MESH: Transcriptome, RNA-seq, biology.organism_classification, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, 030104 developmental biology, chemistry, MESH: Citrus/chemistry, Genetic Loci, Mutagenesis, MESH: Bacteroides/genetics, MESH: Dietary Fiber/metabolism, Transcriptome, Bacteria, Function (biology)

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e8c4c574514d44d2d8374ebf0aa5eb3Test
http://europepmc.org/articles/PMC4896027Test

المؤلفون: Allsopp, L. P., Beloin, C., Ulett, G. C., Valle, J., Totsika, M., Sherlock, O., Ghigo, J.-M., Schembri, M. A.

المساهمون: School of Molecular and Microbial Sciences, The University of Queensland (UQ All campuses : Brisbane, Dutton Park Gatton, Herston, St Lucia and other locations ), Génétique des Biofilms, Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Griffith University Brisbane, This work was supported by grants from the Australian National Health and Medical Research Council (631654), the Australian Research Council (DP1097032), the University of Queensland, the Institut Pasteur, the CNRS URA 2172, the Network of Excellence EuroPathoGenomics, and the European Community (LSHB-CT-2005-512061).M.A.S. is supported by an ARC Future Fellowship, and J.V. was a Marie-Curie Fellow., We thank Laura Zanichelli, Tim J. Wells, Chelsea Stewart, and Barbara Arnts for expert assistance, as well as Sylvie Rimsky for providing the purified native H-NS protein and Per Klemm for providing strain CFT073amp., European Project: 512061,Network of Excellence EuroPathoGenomics

المصدر: ISSN: 0019-9567.

مصطلحات موضوعية: MESH: Adhesins, MESH: Bacterial/genetics/*metabolism, MESH: Escherichia coli Proteins/genetics/*metabolism, MESH: Extracellular Matrix Proteins/metabolism, MESH: Female, MESH: Fimbriae Proteins/metabolism, MESH: Gene Expression Profiling, MESH: Membrane Transport Proteins/genetics/*metabolism, MESH: Mice, MESH: Inbred C57BL, MESH: Polymerase Chain Reaction, MESH: Urinary Tract Infections/microbiology/pathology, MESH: Animals, MESH: Uropathogenic Escherichia coli/*genetics/*pathogenicity, MESH: Virulence Factors/genetics/*metabolism, MESH: Biofilms/growth & development, MESH: DNA, MESH: Cloning, MESH: Molecular, MESH: Bacterial/genetics, MESH: Escherichia coli Infections/microbiology/pathology, MESH: Escherichia coli K12/genetics/pathogenicity, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/21930758; info:eu-repo/grantAgreement//512061/EU/LSHB-CT-2005-512061/Network of Excellence EuroPathoGenomics; pasteur-01385599; https://pasteur.hal.science/pasteur-01385599Test; PUBMED: 21930758; PUBMEDCENTRAL: PMC3255655

الإتاحة: https://doi.org/10.1128/IAI.05322-11Test
https://pasteur.hal.science/pasteur-01385599Test

المؤلفون: Mark A. Schembri, Jaione Valle, Glen C. Ulett, Orla Sherlock, Jean-Marc Ghigo, Luke P. Allsopp, Makrina Totsika, Christophe Beloin

المساهمون: School of Molecular and Microbial Sciences, University of Queensland [Brisbane], Génétique des Biofilms, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Griffith University [Brisbane], This work was supported by grants from the Australian National Health and Medical Research Council (631654), the Australian Research Council (DP1097032), the University of Queensland, the Institut Pasteur, the CNRS URA 2172, the Network of Excellence EuroPathoGenomics, and the European Community (LSHB-CT-2005-512061).M.A.S. is supported by an ARC Future Fellowship, and J.V. was a Marie-Curie Fellow., We thank Laura Zanichelli, Tim J. Wells, Chelsea Stewart, and Barbara Arnts for expert assistance, as well as Sylvie Rimsky for providing the purified native H-NS protein and Per Klemm for providing strain CFT073amp., European Project: 512061,Network of Excellence EuroPathoGenomics, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)

المصدر: Digital.CSIC. Repositorio Institucional del CSIC
instname
Infection and Immunity
Infection and Immunity, American Society for Microbiology, 2012, 80 (1), pp.321-332. ⟨10.1128/IAI.05322-11⟩
Infection and Immunity, 2012, 80 (1), pp.321-332. ⟨10.1128/IAI.05322-11⟩

مصطلحات موضوعية: MESH: Escherichia coli Infections/microbiology/pathology, medicine.disease_cause, urologic and male genital diseases, Polymerase Chain Reaction, MESH: Bacterial/genetics/*metabolism, Fimbriae Proteins, Mice, MESH: Extracellular Matrix Proteins/metabolism, Uropathogenic Escherichia coli, MESH: Animals, MESH: Urinary Tract Infections/microbiology/pathology, Cloning, Molecular, Escherichia coli Infections, MESH: Biofilms/growth & development, Extracellular Matrix Proteins, 0303 health sciences, biology, Membrane transport protein, Escherichia coli Proteins, MESH: DNA, MESH: Fimbriae Proteins/metabolism, Phenotype, female genital diseases and pregnancy complications, 3. Good health, Infectious Diseases, Urinary Tract Infections, Female, MESH: Escherichia coli K12/genetics/pathogenicity, MESH: Bacterial/genetics, DNA, Bacterial, Virulence Factors, MESH: Cloning, Immunology, MESH: Escherichia coli Proteins/genetics/*metabolism, Virulence, MESH: Virulence Factors/genetics/*metabolism, Microbiology, 03 medical and health sciences, MESH: Gene Expression Profiling, MESH: Uropathogenic Escherichia coli/*genetics/*pathogenicity, medicine, Animals, Adhesins, Bacterial, Gene, Escherichia coli, MESH: Mice, 030304 developmental biology, Escherichia coli K12, 030306 microbiology, Gene Expression Profiling, Membrane Transport Proteins, MESH: Polymerase Chain Reaction, MESH: Inbred C57BL, bacterial infections and mycoses, Molecular Pathogenesis, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, Mice, Inbred C57BL, Gene expression profiling, Bacterial adhesin, Biofilms, MESH: Molecular, biology.protein, Parasitology, MESH: Membrane Transport Proteins/genetics/*metabolism, MESH: Adhesins, MESH: Female

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c53244c00f1e9ffd5ed2ba4d03fa1a1aTest
http://hdl.handle.net/10261/97624Test

المؤلفون: Philippe Faure, Geneviève Renauld-Mongénie, Patricia Latour-Lambert, Jean-Marc Ghigo, Evelyne Turlin, Christophe Beloin, Jaione Valle, Nicolas Charbonnel, Chantal Le Bouguénec, Christiane Forestier, Sandra Da Re

المساهمون: Génétique des Biofilms, Institut Pasteur [Paris] (IP), Université d'Auvergne - Clermont-Ferrand I (UdA), Université Pierre et Marie Curie - Paris 6 (UPMC), Membranes bactériennes, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Biologie des Bactéries Pathogènes à Gram-positif, Sanofi Pasteur [Marcy-l'Étoile, France], SDR was supported by Sanofi-Pasteur. JV was a Marie-Curie Fellow. This work was supported by grants from the Institut Pasteur, CNRS (Centre National de la Recherche Scientifique), URA (Unité de echerche Associée) 2172, the Network of Excellence EuroPathoGenomics, LSHB-CT-2005-512061, and the French Government's Investissement d'Avenir program, Laboratoire d'Excellence 'Integrative Biology of Emerging Infectious Diseases' (grant n°ANR-10-LABX-62-IBEID)., We thank Perrine Vasseur for preliminary animal experiments, Christophe De Champs for his help in statistical analyses, and P. Trieu-Cuot and O. Poupel respectively, for kindly providing laboratory facilities and technical assistance for some of the RT-PCR analyses presented herein. We are grateful to M. Mourez for critical reading of the manuscript., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), European Project: 512061,Network of Excellence EuroPathoGenomics, Institut Pasteur [Paris], Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)

المصدر: PLoS ONE
PLoS ONE, 2013, 8 (5), pp.e61628. ⟨10.1371/journal.pone.0061628⟩
PLoS ONE, Public Library of Science, 2013, 8 (5), pp.e61628. ⟨10.1371/journal.pone.0061628⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
PLoS ONE, Vol 8, Iss 5, p e61628 (2013)

مصطلحات موضوعية: MESH: Microbiota/genetics/physiology, medicine.disease_cause, Mice, Microbial Physiology, Colonization, MESH: Animals, Pathogen, 0303 health sciences, Multidisciplinary, Microbiota, MESH: Genes, 3. Good health, Bacterial Pathogens, Klebsiella pneumoniae, Infectious Diseases, MESH: Bacterial/*genetics, Medical Microbiology, Medicine, Female, Research Article, MESH: *Biofilms, Science, Mechanisms of Resistance and Susceptibility, Colonisation resistance, Biology, Microbiology, MESH: Klebsiella pneumoniae/*physiology, Molecular Genetics, 03 medical and health sciences, Symbiosis, Species Specificity, Virology, Microbial Control, medicine, Escherichia coli, Genetics, Animals, MESH: Species Specificity, Microbial Pathogens, MESH: Mice, 030304 developmental biology, 030306 microbiology, Host (biology), Biofilm, Computational Biology, Bacteriology, Commensalism, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, MESH: Escherichia coli/*genetics/*physiology, Genes, Bacterial, MESH: *Symbiosis, Biofilms, Bacterial Biofilms, MESH: Female

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c287c0f29a7591dea900e3ac5aacccafTest
https://hal-pasteur.archives-ouvertes.fr/pasteur-01385430Test