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1دورية أكاديمية
المؤلفون: Liina Hannula, Suvi Kuivanen, Jonathan Lasham, Ravi Kant, Lauri Kareinen, Mariia Bogacheva, Tomas Strandin, Tarja Sironen, Jussi Hepojoki, Vivek Sharma, Petri Saviranta, Anja Kipar, Olli Vapalahti, Juha T. Huiskonen, Ilona Rissanen
المصدر: Microbiology Spectrum, Vol 12, Iss 4 (2024)
مصطلحات موضوعية: SARS-CoV-2, nanobody, virus neutralization, protein engineering, diagnostics, Microbiology, QR1-502
وصف الملف: electronic resource
العلاقة: https://doaj.org/toc/2165-0497Test
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2دورية أكاديمية
المؤلفون: Jonathan Lasham, Amina Djurabekova, Volker Zickermann, Janet Vonck, Vivek Sharma
مصطلحات موضوعية: Biophysics, Biochemistry, Medicine, Biotechnology, Cancer, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Information Systems not elsewhere classified, provide valuable information, force field parameters, structure much better, structure diverges far, protonation state predictions, protonation changes play, protein – water, important functional role, amino acids modeled, molecular dynamics simulations, selecting protonation states, predetermined protonation states, conventional md simulations, classical md simulations, standard charged states, md simulations performed, standard protonation, amino acids, protein structure
الإتاحة: https://doi.org/10.1021/acs.jpcb.3c07421.s001Test
https://figshare.com/articles/journal_contribution/Role_of_Protonation_States_in_the_Stability_of_Molecular_Dynamics_Simulations_of_High-Resolution_Membrane_Protein_Structures/25330492Test -
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المؤلفون: Jonathan Lasham, Outi Haapanen, Volker Zickermann, Vivek Sharma
المساهمون: Materials Physics, Department of Physics, Institute of Biotechnology
مصطلحات موضوعية: Electron transfer, Semiquinone, Molecular dynamics simulations, Proton pumping, Biophysics, 1182 Biochemistry, cell and molecular biology, Cell Biology, Bioenergetics, Biochemistry
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df193307cfc21239f5de6901e3c1f6eeTest
http://hdl.handle.net/10138/356023Test -
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المؤلفون: Oleksii Zdorevskyi, Amina Djurabekova, Jonathan Lasham, Vivek Sharma
المساهمون: Department of Physics, Materials Physics, Institute of Biotechnology
المصدر: Chemical Science.
مصطلحات موضوعية: 1182 Biochemistry, cell and molecular biology, General Chemistry, Coupling mechanism, Escherichia-coli
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3dfa4639b23faca93cb2e5837418e2faTest
https://doi.org/10.1039/d3sc01427dTest -
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المؤلفون: Liina Hannula, Suvi Kuivanen, Jonathan Lasham, Ravi Kant, Lauri Kareinen, Mariia Bogacheva, Tomas Strandin, Tarja Sironen, Vivek Sharma, Petri Saviranta, Anja Kipar, Olli Vapalahti, Juha T. Huiskonen, Ilona Rissanen
المصدر: BioRxiv
bioRxivالوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::937dd6201d28d993d4bb79234a14dec2Test
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المؤلفون: Volker Zickermann, Janet Vonck, Jonathan Lasham, Vivek Sharma, Hao Xie, Deryck J. Mills, Etienne Galemou Yoga, Amina Djurabekova, Kristian Parey, Outi Haapanen, Werner Kühlbrandt
المساهمون: Doctoral Programme in Materials Research and Nanosciences, Materials Physics, Department of Physics
المصدر: Science Advances
مصطلحات موضوعية: Proton, Protein subunit, Energy metabolism, High resolution, CRYO-EM, 01 natural sciences, STOICHIOMETRY, 114 Physical sciences, Biochemistry, 03 medical and health sciences, Molecular dynamics, Oxidoreductase, Structural Biology, 0103 physical sciences, CRYSTAL-STRUCTURE, 030304 developmental biology, chemistry.chemical_classification, 0303 health sciences, Multidisciplinary, 010304 chemical physics, Chemistry, SciAdv r-articles, 3. Good health, Membrane protein complex, MOLECULAR-DYNAMICS, NADH, SUBUNIT, Biophysics, FORCE-FIELD, VISUALIZATION, Biomedicine and Life Sciences, ORIENTATION, Mitochondrial Complex I, TRANSITION, Research Article
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a74168b4fa8f0f5987dd04be488a7dd6Test
http://europepmc.org/articles/PMC8589321Test -
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المؤلفون: Tomoo Shiba, Takahiro Masuya, Daniel Ken Inaoka, Vivek Sharma, Masatoshi Murai, Outi Haapanen, Shinpei Uno, Kyoko Shinzawa-Itoh, Jonathan Lasham, Hideto Miyoshi
المساهمون: Materials Physics, Department of Physics, Institute of Biotechnology
المصدر: J Biol Chem
مصطلحات موضوعية: Models, Molecular, MECHANISM, 0301 basic medicine, Respiratory chain, bioenergetics, Biochemistry, Mitochondria, Heart, BINDING, CRYSTAL-STRUCTURE, OXIDOREDUCTASE, Plant Proteins, Membrane Potential, Mitochondrial, chemistry.chemical_classification, complex I, Chemistry, Electron acceptor, Quinone, mitochondria, Alkynes, Protons, Oxidoreductases, Proteolipids, Submitochondrial Particles, respiratory chain, chemical biology, INNER MEMBRANE, 114 Physical sciences, Electron Transport, Mitochondrial Proteins, 03 medical and health sciences, Electron transfer, Oxidoreductase, ubiquinone, Animals, Inner membrane, Computer Simulation, Submitochondrial particle, Molecular Biology, Electron Transport Complex I, 030102 biochemistry & molecular biology, PINPOINT CHEMICAL-MODIFICATION, Cell Biology, NAD, 49 KDA, Protein Subunits, REDUCTION, 030104 developmental biology, Structural biology, proton pump, Molecular Probes, NADH, Biophysics, 1182 Biochemistry, cell and molecular biology, Cattle
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ef7f4cd6b1302631ad5ca73710102396Test
https://doi.org/10.1074/jbc.ra119.012347Test -
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المؤلفون: Patryk Kuleta, Iwona Ekiert, Artur Osyczka, Marcin Sarewicz, Vivek Sharma, Jonathan Lasham, Robert Ekiert
المساهمون: Materials Physics, Department of Physics, Institute of Biotechnology
المصدر: Proceedings of the National Academy of Sciences of the United States of America
مصطلحات موضوعية: DYNAMICS, Models, Molecular, Protein Conformation, Antimycin A, BIS-HISTIDINE, 01 natural sciences, Rhodobacter capsulatus, chemistry.chemical_compound, Electron Transport Complex III, UBIQUINOL-CYTOCHROME-C2 OXIDOREDUCTASE, ELECTRON-TRANSFER, BC(1), Heme, 0303 health sciences, Multidisciplinary, biology, Cytochrome bc1, Chemistry, Cytochrome b, Biological Sciences, electron transfer, Mitochondria, COMPLEX-III, INTERFACE, electron paramagnetic resonance, Oxidation-Reduction, Hemeprotein, 010402 general chemistry, Redox, 114 Physical sciences, Cofactor, RHODOBACTER-CAPSULATUS, 03 medical and health sciences, Electron transfer, mitochondrial dysfunction, Q(O) SITE, density functional theory, 030304 developmental biology, Spectrum Analysis, Electron Spin Resonance Spectroscopy, Hydrogen Bonding, CORRELATION-ENERGY, molecular dynamics simulations, Cytochrome b Group, 0104 chemical sciences, Biophysics and Computational Biology, Coenzyme Q – cytochrome c reductase, Mutation, biology.protein, Biophysics
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1e42538b3f050564acf228b5aff769dbTest
http://europepmc.org/articles/PMC8379992Test -
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المؤلفون: Patryk Kuleta, Robert Ekiert, Jonathan Lasham, Arkadiusz Borek, Anna Wójcik-Augustyn, Vivek Sharma, Artur Osyczka
المصدر: Biochimica et Biophysica Acta (BBA) - Bioenergetics. 1863:148745
مصطلحات موضوعية: Biophysics, Cell Biology, Biochemistry
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::5076d3c95b9796f60afdd331a526aaccTest
https://doi.org/10.1016/j.bbabio.2022.148745Test -
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المؤلفون: Jonathan Lasham, Outi Haapanen, Volker Zickermann, Vivek Sharma
المصدر: Biochimica et Biophysica Acta (BBA) - Bioenergetics. 1863:148648
مصطلحات موضوعية: Biophysics, Cell Biology, Biochemistry
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::4515d7a80e16513a4f435217c20633deTest
https://doi.org/10.1016/j.bbabio.2022.148648Test