المؤلفون: Julia Koehler Leman, Sergey Lyskov, Steven M. Lewis, Jared Adolf-Bryfogle, Rebecca F. Alford, Kyle Barlow, Ziv Ben-Aharon, Daniel Farrell, Jason Fell, William A. Hansen, Ameya Harmalkar, Jeliazko Jeliazkov, Georg Kuenze, Justyna D. Krys, Ajasja Ljubetič, Amanda L. Loshbaugh, Jack Maguire, Rocco Moretti, Vikram Khipple Mulligan, Morgan L. Nance, Phuong T. Nguyen, Shane Ó Conchúir, Shourya S. Roy Burman, Rituparna Samanta, Shannon T. Smith, Frank Teets, Johanna K. S. Tiemann, Andrew Watkins, Hope Woods, Brahm J. Yachnin, Christopher D. Bahl, Chris Bailey-Kellogg, David Baker, Rhiju Das, Frank DiMaio, Sagar D. Khare, Tanja Kortemme, Jason W. Labonte, Kresten Lindorff-Larsen, Jens Meiler, William Schief, Ora Schueler-Furman, Justin B. Siegel, Amelie Stein, Vladimir Yarov-Yarovoy, Brian Kuhlman, Andrew Leaver-Fay, Dominik Gront, Jeffrey J. Gray, Richard Bonneau

المصدر: Nature Communications, Vol 12, Iss 1, Pp 1-15 (2021)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

العلاقة: https://doaj.org/toc/2041-1723Test

الوصول الحر: https://doaj.org/article/7ccba8c202cd473d906c246ef7b2eb77Test

المؤلفون: Jochen Ismer, Alexander S. Rose, Johanna K. S. Tiemann, Peter W. Hildebrand

المصدر: BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)

مصطلحات موضوعية: Cryo-EM, Fragment based modeling, Flexible fitting, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

العلاقة: http://link.springer.com/article/10.1186/s12859-017-1904-5Test; https://doaj.org/toc/1471-2105Test

الوصول الحر: https://doaj.org/article/f5d8ee471b30437c904938b88a724924Test

المؤلفون: Michelle Kampfrath, René Staritzbichler, Guillermo Pérez Hernández, Alexander S Rose, Johanna K S Tiemann, Gerik Scheuermann, Daniel Wiegreffe, Peter W Hildebrand

المصدر: Kampfrath, M, Staritzbichler, R, Hernández, G P, Rose, A S, Tiemann, J K S, Scheuermann, G, Wiegreffe, D & Hildebrand, P W 2022, ' MDsrv : visual sharing and analysis of molecular dynamics simulations ', Nucleic Acids Research, vol. 50, no. W1, pp. W483-W489 . https://doi.org/10.1093/nar/gkac398Test

مصطلحات موضوعية: FOS: Computer and information sciences, Computer Vision and Pattern Recognition (cs.CV), Computer Science - Computer Vision and Pattern Recognition, Computer Science - Human-Computer Interaction, Genetics, Human-Computer Interaction (cs.HC)

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7687a4a18df72988bd7348e71c4a1061Test
https://doi.org/10.1093/nar/gkac398Test

المؤلفون: Johanna K. S. Tiemann, Peter W. Hildebrand, Alexander S. Rose

المصدر: Trends in Biochemical Sciences. 44:902-913

مصطلحات موضوعية: Macromolecular Substances, Computer science, media_common.quotation_subject, Reliability (computer networking), Molecular Conformation, Molecular Dynamics Simulation, Biochemistry, Molecular graphics, User-Computer Interface, 03 medical and health sciences, 0302 clinical medicine, Human–computer interaction, Computer Graphics, Web application, Function (engineering), Molecular Biology, Interactive visualization, 030304 developmental biology, Reusability, media_common, 0303 health sciences, business.industry, Reproducibility of Results, Visualization, Data analysis, business, Software, 030217 neurology & neurosurgery

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::05c3be20dcd56f9b0f656f466b557a38Test
https://doi.org/10.1016/j.tibs.2019.06.004Test

المؤلفون: Dominik Gront, Kresten Lindorff-Larsen, Jack Maguire, Jens Meiler, Christopher D. Bahl, Jason S. Fell, Chris Bailey-Kellogg, Andrew M. Watkins, Frank DiMaio, Daniel P. Farrell, Jared Adolf-Bryfogle, Julia Koehler Leman, Frank D. Teets, Vladimir Yarov-Yarovoy, Ajasja Ljubetič, Shannon T. Smith, William A. Hansen, Steven M. Lewis, Justyna Krys, Shourya S. Roy Burman, Amelie Stein, Rhiju Das, David Baker, Vikram Khipple Mulligan, Jason W. Labonte, Georg Kuenze, William R. Schief, Rebecca F. Alford, Shane Ó Conchúir, Hope Woods, Tanja Kortemme, Johanna K. S. Tiemann, Sagar D. Khare, Sergey Lyskov, Ziv Ben-Aharon, Ora Schueler-Furman, Amanda L. Loshbaugh, Richard Bonneau, Brahm J. Yachnin, Andrew Leaver-Fay, Kyle A. Barlow, Phuong T. Nguyen, Jeliazko R. Jeliazkov, Jeffrey J. Gray, Justin B. Siegel, Rocco Moretti, Ameya Harmalkar, Brian Kuhlman

مصطلحات موضوعية: Workflow, Documentation, SIMPLE (military communications protocol), business.industry, Computer science, Supercomputer, Software engineering, business, Protocol (object-oriented programming), Scientific software

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::7ae3b538a88ca76a15e111345bd76765Test
https://doi.org/10.1101/2021.04.04.438423Test

المؤلفون: Jens Carlsson, Peter Kolb, David E. Gloriam, Andrew B. Tobin, Eddy Sotelo, Johanna K. S. Tiemann, Maria Waldhoer, Nina Vardjan, Mette M. Rosenkilde, Aurélien Rizk, Mickey Kosloff, Jana Selent, Gyorgy M. Keseru, Stefan Mordalski, Martha E. Sommer, Chris de Graaf

المصدر: Sommer, M E, Selent, J, Carlsson, J, De Graaf, C, Gloriam, D E, Keseru, G M, Kosloff, M, Mordalski, S, Rizk, A, Rosenkilde, M M, Sotelo, E, Tiemann, J K S, Tobin, A, Vardjan, N, Waldhoer, M & Kolb, P 2020, ' The European Research Network on Signal Transduction (ERNEST) : Toward a Multidimensional Holistic Understanding of G Protein-Coupled Receptor Signaling ', ACS Pharmacology & Translational Science, vol. 3, no. 2, pp. 361-370 . https://doi.org/10.1021/acsptsci.0c00024Test
ACS Pharmacol Transl Sci
ACS Pharmacology and Translational Science

مصطلحات موضوعية: Computer science, Functional selectivity, Computational biology, Pharmacology and Toxicology, Signal transduction, Therapeutic targeting, Biased agonism, 03 medical and health sciences, 0302 clinical medicine, GPCR, Pharmacology (medical), G protein-coupled receptor, 030304 developmental biology, Pharmacology, 0303 health sciences, Network on, European research, Farmakologi och toxikologi, G Protein-Coupled Receptor Signaling, 3. Good health, biased agonism, structure based drug design, Structure based drug design, functional selectivity, 030217 neurology & neurosurgery, Function (biology), signal transduction

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4374d747b2bc1fd8ae99f4fbb6b6fc8fTest
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-433663Test

المؤلفون: Ramon Guixà-González, Johanna K. S. Tiemann, Adrián García-Recio, Eduardo Mayol, Arnau Cordomí, Peter W. Hildebrand, Mireia Olivella

المصدر: Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Nucleic Acids Research

مصطلحات موضوعية: Models, Molecular, Web server, Protein Conformation, AcademicSubjects/SCI00010, Biology, computer.software_genre, 01 natural sciences, Receptors, G-Protein-Coupled, 03 medical and health sciences, Molecular dynamics, Protein structure, 0103 physical sciences, Genetics, Molecule, Web application, Receptor, Serotonin, 5-HT2A, 030304 developmental biology, G protein-coupled receptor, 0303 health sciences, Internet, 010304 chemical physics, business.industry, Water, Structure and function, Docking (molecular), Web Server Issue, Biological system, business, computer, Software

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d1992e9b277ea95aad9afd8f29eb9f5aTest
https://ddd.uab.cat/record/227800Test

المؤلفون: Minos-Timotheos Matsoukas, David E. Gloriam, Ismael Rodríguez-Espigares, Agnieszka Sztyler, Davide Provasi, Arnau Cordomí, Peter Kolb, David Aranda-García, Toni Giorgino, Ferran Sanz, Mariona Torrens-Fontanals, Peter W. Hildebrand, Maria Marti-Solano, Mireia Olivella, Alejandro Varela-Rial, Gianni De Fabritiis, José Carlos Gómez-Tamayo, Laura Pérez-Benito, Tomasz Maciej Stepniewski, Eduardo Mayol, Silvana Vasile, Slawomir Filipek, Ulrich Zachariae, Jens Carlsson, Dorota Latek, Harel Weinstein, Gáspár Pándy-Szekeres, Przemyslaw Miszta, Willem Jespers, Nathalie Worp, Mireia Jiménez-Rosés, Juan Manuel Ramírez-Anguita, Marta Filizola, George Khelashvili, Angel Gonzalez, Brian Medel Lacruz, Pierre Matricon, Iván Rodríguez-Torrecillas, Xavier Deupi, Adrián Morales-Pastor, Jessica Sallander, Hugo Gutiérrez-de-Terán, Johanna K. S. Tiemann, Jana Selent, Jon Kapla, Ramon Guixà-González, Santiago Ríos

المصدر: Nature Methods
Nature methods (Online) 17 (2020): 777–787. doi:10.1038/s41592-020-0884-y
info:cnr-pdr/source/autori:Rodríguez-Espigares, Ismael; Torrens-Fontanals, Mariona; Tiemann, Johanna K.S.; Aranda-García, David; Ramírez-Anguita, Juan Manuel; Stepniewski, Tomasz Maciej; Worp, Nathalie; Varela-Rial, Alejandro; Morales-Pastor, Adrián; Medel-Lacruz, Brian; Pándy-Szekeres, Gáspár; Mayol, Eduardo; Giorgino, Toni; Carlsson, Jens; Deupi, Xavier; Filipek, Slawomir; Filizola, Marta; Gómez-Tamayo, José Carlos; Gonzalez, Angel; Gutiérrez-de-Terán, Hugo; Jiménez-Rosés, Mireia; Jespers, Willem; Kapla, Jon; Khelashvili, George; Kolb, Peter; Latek, Dorota; Marti-Solano, Maria; Matricon, Pierre; Matsoukas, Minos Timotheos; Miszta, Przemyslaw; Olivella, Mireia; Perez-Benito, Laura; Provasi, Davide; Ríos, Santiago; R. Torrecillas, Iván; Sallander, Jessica; Sztyler, Agnieszka; Vasile, Silvana; Weinstein, Harel; Zachariae, Ulrich; Hildebrand, Peter W.; De Fabritiis, Gianni; Sanz, Ferran; Gloriam, David E.; Cordomi, Arnau; Guixà-González, Ramon; Selent, Jana/titolo:GPCRmd uncovers the dynamics of the 3D-GPCRome/doi:10.1038%2Fs41592-020-0884-y/rivista:Nature methods (Online)/anno:2020/pagina_da:777/pagina_a:787/intervallo_pagine:777–787/volume:17

مصطلحات موضوعية: Models, Molecular, 0303 health sciences, model, business.industry, Computer science, Extramural, Protein Conformation, Protein database, Cell Biology, Molecular Dynamics Simulation, simulation, Biochemistry, Data science, molecular dynamics, Visualization, Receptors, G-Protein-Coupled, 03 medical and health sciences, Software, GPCR, Metabolome, business, Molecular Biology, 030304 developmental biology, Biotechnology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0cb6367e2808eb6eb81235f76f7853adTest

المؤلفون: Johanna K. S. Tiemann, Alexander S. Rose, Mitra D. Darvish, T. Hilal, Christian M. T. Spahn, Jochen Ismer, Peter W. Hildebrand

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Web server, Similarity (geometry), Protein Conformation, Biology, computer.software_genre, Login, 03 medical and health sciences, Software, Protein structure, Computer graphics (images), Genetics, Web application, Amino Acids, Internet, Sequence, business.industry, Cryoelectron Microscopy, Proteins, Visualization, 030104 developmental biology, Web Server Issue, business, computer

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b97c7ea326a7a9256bc3fdd4e452f33bTest
https://doi.org/10.1093/nar/gky424Test

المؤلفون: Johanna K. S. Tiemann, George Khelashvili, Brian Medel-Lacruz, Ramon Guixà-González, Alejandro Varela-Rial, José Carlos Gómez-Tamayo, Marta Filizola, Dorota Latek, Gianni De Fabritiis, David Aranda-García, Juan Manuel Ramírez-Anguita, Santiago Ríos, Davide Provasi, David E. Gloriam, Jana Selent, Minos-Timotheos Matsoukas, Toni Giorgino, Ferran Sanz, Jon Kapla, Silvana Vasile, Slawomir Filipek, Xavier Deupi, Adrián Morales-Pastor, Przemyslaw Miszta, Àngel Puyol González, Mireia Jiménez-Rosés, Harel Weinstein, Peter Kolb, Agnieszka Sztyler, Nathalie Worp, Maria Marti-Solano, Arnau Cordomí, Ulrich Zachariae, Ismael Rodríguez-Espigares, Pierre Matricon, Ivan R. Torrecillas, Tomasz Maciej Stepniewski, Eduardo Mayol, Gáspár Pándy-Szekeres, Peter W. Hildebrand, Mireia Olivella, Mariona Torrens-Fontanals, Hugo Gutiérrez-de-Terán, Laura Pérez-Benito, Jens Carlsson, Willem Jespers, Jessica Sallander

المصدر: Nature Methods. 17:861-862

مصطلحات موضوعية: Published Erratum, Protein database, Cell Biology, Computational biology, Biology, Molecular Biology, Biochemistry, Membrane biophysics, Biotechnology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::3068198597dedfe387324ef53f9b005bTest
https://doi.org/10.1038/s41592-020-0928-3Test