المؤلفون: Hanazono, Yuya

مرشدي الرسالة: 三木, 邦夫, 杉山, 弘, 秋山, 芳展, 花園, 祐矢, ハナゾノ, ユウヤ

مصطلحات موضوعية: crystal structure, circular dichroism, co-translational folding, lambda repressor, WW domain, small heat shock protein, 400

وصف الملف: application/pdf

الإتاحة: http://hdl.handle.net/2433/188506Test

المؤلفون: Omori, Satoshi, Hanazono, Yuya, Nishi, Hafumi, Kinoshita, Kengo

المصدر: Biophysical Journal; June 2024, Vol. 123 Issue: 12 p1751-1762, 12p

المؤلفون: Yoshida, Mutsumi, Hanazono, Yuya, Numoto, Nobutaka, Nagao, Satoshi, Yabuno, Saaya, Kitagawa, Yumi, Sekiguchi, Hiroshi, Ito, Nobutoshi, Azuma, Takachika, Oda, Masayuki

المصدر: Arch Biochem Biophys ; ISSN:1096-0384 ; Volume:758

مصطلحات موضوعية: Affinity maturation, Antigen binding, Conformational change, Crystal structure, Thermodynamics

العلاقة: https://doi.org/10.1016/j.abb.2024.110068Test; https://pubmed.ncbi.nlm.nih.gov/38909835Test

الإتاحة: https://doi.org/10.1016/j.abb.2024.110068Test
https://pubmed.ncbi.nlm.nih.gov/38909835Test

المؤلفون: Hanazono, Yuya, Hirano, Yu, Takeda, Kazuki, Kusaka, Katsuhiro, Tamada, Taro, Miki, Kunio

المساهمون: 花園, 祐矢, 平野, 優, 竹田, 一旗, 日下, 勝弘, 玉田, 太郎, 三木, 邦夫

العلاقة: https://www.kyoto-u.ac.jp/ja/research-news/2022-05-27-3Test; http://hdl.handle.net/2433/274106Test; Science Advances; 20; eabn2276

الإتاحة: http://hdl.handle.net/2433/274106Test

المؤلفون: Lensink, Marc, Brysbaert, Guillaume, Mauri, Théo, Nadzirin, Nurul, Velankar, Sameer, Chaleil, Raphael, Clarence, Tereza, Bates, Paul, Kong, Ren, Liu, Bin, Yang, Guangbo, Liu, Ming, Shi, Hang, Lu, Xufeng, Chang, Shan, Roy, Raj, Quadir, Farhan, Liu, Jian, Cheng, Jianlin, Antoniak, Anna, Czaplewski, Cezary, Giełdoń, Artur, Kogut, Mateusz, Lipska, Agnieszka, Liwo, Adam, Lubecka, Emilia, Maszota‐zieleniak, Martyna, Sieradzan, Adam, Ślusarz, Rafał, Wesołowski, Patryk, Zięba, Karolina, del Carpio Muñoz, Carlos, Ichiishi, Eiichiro, Harmalkar, Ameya, Gray, Jeffrey, Bonvin, Alexandre, Ambrosetti, Francesco, Vargas Honorato, Rodrigo, Jandova, Zuzana, Jiménez‐garcía, Brian, Koukos, Panagiotis, van Keulen, Siri, van Noort, Charlotte, Réau, Manon, Roel‐touris, Jorge, Kotelnikov, Sergei, Padhorny, Dzmitry, Porter, Kathryn, Alekseenko, Andrey, Ignatov, Mikhail, Desta, Israel, Ashizawa, Ryota, Sun, Zhuyezi, Ghani, Usman, Hashemi, Nasser, Vajda, Sandor, Kozakov, Dima, Rosell, Mireia, Rodríguez‐lumbreras, Luis, Fernandez‐recio, Juan, Karczynska, Agnieszka, Grudinin, Sergei, Yan, Yumeng, Li, Hao, Lin, Peicong, Huang, Sheng‐you, Christoffer, Charles, Terashi, Genki, Verburgt, Jacob, Sarkar, Daipayan, Aderinwale, Tunde, Wang, Xiao, Kihara, Daisuke, Nakamura, Tsukasa, Hanazono, Yuya, Gowthaman, Ragul, Guest, Johnathan, Yin, Rui, Taherzadeh, Ghazaleh, Pierce, Brian, Barradas‐bautista, Didier, Cao, Zhen, Cavallo, Luigi, Oliva, Romina, Sun, Yuanfei, Zhu, Shaowen, Shen, Yang, Park, Taeyong, Woo, Hyeonuk, Yang, Jinsol, Kwon, Sohee, Won, Jonghun, Seok, Chaok, Kiyota, Yasuomi, Kobayashi, Shinpei, Harada, Yoshiki, Takeda‐shitaka, Mayuko, Kundrotas, Petras, Singh, Amar, Vakser, Ilya, Dapkūnas, Justas, Olechnovič, Kliment, Venclovas, Česlovas, Duan, Rui, Qiu, Liming, Xu, Xianjin, Zhang, Shuang, Zou, Xiaoqin, Wodak, Shoshana

المساهمون: Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 (UGSF), Université de Lille-Centre National de la Recherche Scientifique (CNRS), European Bioinformatics Institute Hinxton (EMBL-EBI), EMBL Heidelberg, Biomolecular Modelling Laboratory London, The Francis Crick Institute London, Jiangsu University of Technology Changzhou, Department of Electrical Engineering and Computer Science Columbia (EECS), University of Missouri Columbia (Mizzou), University of Missouri System-University of Missouri System, Institute for Data Science and Informatics Columbia, University of Gdańsk (UG), Faculty of Electronics, Telecommunications and Informatics GUT Gdańsk (ETI), Gdańsk University of Technology (GUT), Medical University of Gdańsk, Graduate School of Medical Sciences Nagoya, Nagoya City University Nagoya, Japan, International University of Health and Welfare Hospital (IUHW Hospital), Department of Chemical and Biomolecular Engineering Baltimore, Johns Hopkins University (JHU), Bijvoet Center of Biomolecular Research Utrecht, Universiteit Utrecht / Utrecht University Utrecht, Stony Brook University SUNY (SBU), State University of New York (SUNY), Innopolis University, Boston University Boston (BU), Russian Academy of Sciences Moscow (RAS), Barcelona Supercomputing Center - Centro Nacional de Supercomputacion (BSC-CNS), Universidad de La Rioja (UR), Données, Apprentissage et Optimisation (DAO), Laboratoire Jean Kuntzmann (LJK), Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA)-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA), Huazhong University of Science and Technology Wuhan (HUST), Indiana University - Purdue University Indianapolis (IUPUI), Indiana University System, Graduate School of Information Sciences Sendaï, Tohoku University Sendai, National Institutes for Quantum and Radiological Science and Technology (QST), University of Maryland Baltimore, King Abdullah University of Science and Technology Saudi Arabia (KAUST), University of Naples Federico II = Università degli studi di Napoli Federico II, Texas A&M University Galveston, Seoul National University Seoul (SNU), Kitasato University, University of Kansas Lawrence (KU), Vilnius University Vilnius, University of Missouri System, VIB-VUB Center for Structural Biology Bruxelles, VIB Belgium, European Project: 675728,H2020,H2020-EINFRA-2015-1,BioExcel(2015), European Project: 823830,H2020-EU.1.4.1.3. Development, deployment and operation of ICT-based e-infrastructures, H2020-EU.1.4. EXCELLENT SCIENCE - Research Infrastructures ,BioExcel-2(2019), European Project: 777536,H2020-EU.1.4.1.3. Development, deployment and operation of ICT-based e-infrastructures, H2020-EU.1.4. EXCELLENT SCIENCE - Research Infrastructures,EOSC-hub(2018)

المصدر: ISSN: 0887-3585.

مصطلحات موضوعية: CAPRI, CASP, oligomeric state, blind prediction, protein-protein interaction, protein complexes, protein assemblies, template-based modeling, docking, protein docking, [SDV]Life Sciences [q-bio]

العلاقة: info:eu-repo/grantAgreement//675728/EU/Centre of Excellence for Biomolecular Research/BioExcel; info:eu-repo/grantAgreement//823830/EU/BioExcel Centre of Excellence for ComputationalBiomolecular Research/BioExcel-2; info:eu-repo/grantAgreement//777536/EU/Integrating and managing services for the European Open Science Cloud/EOSC-hub; hal-03448743; https://hal.science/hal-03448743Test; https://hal.science/hal-03448743/documentTest; https://hal.science/hal-03448743/file/manuscript.pdfTest

الإتاحة: https://doi.org/10.1002/prot.26222Test
https://hal.science/hal-03448743Test
https://hal.science/hal-03448743/documentTest
https://hal.science/hal-03448743/file/manuscript.pdfTest

المؤلفون: Kryshtafovych, Andriy, Moult, John, Billings, Wendy, M, Della Corte, Dennis, Fidelis, Krzysztof, Kwon, Sohee, Olechnovič, Kliment, Seok, Chaok, Venclovas, Česlovas, Won, Jonghun, Adhikari, Badri, Adiyaman, Recep, Aguirre-Plans, Joaquim, Anishchenko, Ivan, Baek, Minkyung, Baker, David, Baldassarre, Frederico, Barger, Jacob, Bhattacharya, Sutanu, Bhattacharya, Debswapna, Bitton, Mor, Cao, Renzhi, Cheng, Jianlin, Christoffer, Charles, Czaplewski, Cezary, Elofsson, Arne, Faraggi, Eshel, Feig, Michael, Fernandez-Fuentes, Narcis, Grishin, Nick, Grudinin, Sergei, Guo, Zhiye, Hanazono, Yuya, Hassabis, Demis, Hedelius, Bryce, Heo, Lim, Hiranuma, Naozumi, Hunt, Cassandra, Igashov, Ilia, Ishida, Takashi, Jernigan, Robert, L., Jones, David, Jumper, John, Kadukova, Maria, Kandathil, Shaun, Keasar, Chen, Kihara, Daisuke, Kinch, Lisa, Kiyota, Yasuomi, Kloczkowski, Andrzje, Kohli, Pushmeet, Kogut, Mateusz, Laine, Elodie, Lilley, Cade, Liu, Jian, Liwo, Adam, Lubecka, Emilia, Mondal, Arup, Morris, Connor, J., Mcguffin, Liam, Molina, Alexis, Nakamura, Tsukasa, Oliva, Baldo, Perez, Alberto, Pozzati, Gabriele, Sarkar, Daipayan, Sato, Rin, Schwede, Torsten, Shrestha, Bikash, Sidi, Tomer, Studer, Gabriel, Shuvo, Md Hossain, Takeda-Shitaka, Mayuko, Takei, Yuma, Terashi, Genki, Tomii, Kentaro, Tsuchiya, Yuko, Tunyasuvunakool, Kathryn, Waliner, Björn, Wu, Tianqi, Xu, Jinbo, Yamamori, Yu, Zhang, Chengxin, Zhang, Yang, Zheng, Wei

المساهمون: University of California Davis (UC Davis), University of California (UC), Institute for Bioscience and Biotechnology Research Rockville, MD, États-Unis (IBBR), University of Maryland College Park, University of Maryland System-University of Maryland System, Brigham Young University (BYU), Seoul National University Seoul (SNU), Vilnius University Vilnius, University of Missouri St. Louis, University of Missouri System, University of Reading (UOR), Universitat Pompeu Fabra Barcelona (UPF), Biorobotics Lab (University of Washington), University of Washington Seattle, KTH Royal Institute of Technology Stockholm (KTH ), Auburn University (AU), Ben-Gurion University of the Negev (BGU), Pacific Lutheran University Tacoma (PLU), University of Missouri Columbia (Mizzou), Purdue University West Lafayette, University of Gdańsk (UG), Stockholm University, Indiana University - Purdue University Indianapolis (IUPUI), Indiana University System, Michigan State University East Lansing, Michigan State University System, Aberystwyth University, University of Texas Southwestern Medical Center Dallas, Données, Apprentissage et Optimisation (DAO), Laboratoire Jean Kuntzmann (LJK), Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA)-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA), National Institutes for Quantum and Radiological Science and Technology (QST), DeepMind London, DeepMind Technologies, Moscow Institute of Physics and Technology Moscow (MIPT), Tokyo Institute of Technology Tokyo (TITECH), Iowa State University (ISU), University College of London London (UCL), Kitasato University, Ohio State University Columbus (OSU), Biologie Computationnelle et Quantitative = Laboratory of Computational and Quantitative Biology (LCQB), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Paris Seine (IBPS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), University of Florida Gainesville (UF), Barcelona Supercomputing Center - Centro Nacional de Supercomputacion (BSC-CNS), Tohoku University Sendai, Université de Bâle = University of Basel = Basel Universität (Unibas), National Institute of Advanced Industrial Science and Technology (AIST), Linköping University (LIU), Toyota Technological Institute at Chicago Chicago (TTIC), University of Michigan Ann Arbor, University of Michigan System

المصدر: ISSN: 0887-3585.

مصطلحات موضوعية: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

العلاقة: hal-03454382; https://hal.science/hal-03454382Test; https://hal.science/hal-03454382/documentTest; https://hal.science/hal-03454382/file/CASP-covid_R1_v3.pdfTest

الإتاحة: https://doi.org/10.1002/prot.26231Test
https://hal.science/hal-03454382Test
https://hal.science/hal-03454382/documentTest
https://hal.science/hal-03454382/file/CASP-covid_R1_v3.pdfTest

المؤلفون: Lensink, Marc F., Brysbaert, Guillaume, Mauri, Théo, Nadzirin, Nurul, Velankar, Sameer, Chaleil, Raphael A.G., Clarence, Tereza, Bates, Paul A., Kong, Ren, Liu, Bin, Yang, Guangbo, Liu, Ming, Shi, Hang, Lu, Xufeng, Chang, Shan, Roy, Raj S., Quadir, Farhan, Liu, Jian, Cheng, Jianlin, Antoniak, Anna, Czaplewski, Cezary, Giełdoń, Artur, Kogut, Mateusz, Lipska, Agnieszka G., Liwo, Adam, Lubecka, Emilia A., Maszota-Zieleniak, Martyna, Sieradzan, Adam K., Ślusarz, Rafał, Wesołowski, Patryk A., Zięba, Karolina, Del Carpio Muñoz, Carlos A., Ichiishi, Eiichiro, Harmalkar, Ameya, Gray, Jeffrey J., Bonvin, Alexandre M.J.J., Ambrosetti, Francesco, Vargas Honorato, Rodrigo, Jandova, Zuzana, Jiménez-García, Brian, Koukos, Panagiotis I., Van Keulen, Siri, Van Noort, Charlotte W., Réau, Manon, Roel-Touris, Jorge, Kotelnikov, Sergei, Padhorny, Dzmitry, Porter, Kathryn A., Alekseenko, Andrey, Ignatov, Mikhail, Desta, Israel, Ashizawa, Ryota, Sun, Zhuyezi, Ghani, Usman, Hashemi, Nasser, Vajda, Sandor, Kozakov, Dima, Rosell, Mireia, Rodríguez-Lumbreras, Luis A., Fernandez-Recio, Juan, Karczynska, Agnieszka, Grudinin, Sergei, Yan, Yumeng, Li, Hao, Lin, Peicong, Huang, Sheng You, Christoffer, Charles, Terashi, Genki, Verburgt, Jacob, Sarkar, Daipayan, Aderinwale, Tunde, Wang, Xiao, Kihara, Daisuke, Nakamura, Tsukasa, Hanazono, Yuya, Gowthaman, Ragul, Guest, Johnathan D., Yin, Rui, Taherzadeh, Ghazaleh, Pierce, Brian G., Barradas-Bautista, Didier, Cao, Zhen, Cavallo, Luigi, Oliva, Romina, Sun, Yuanfei, Zhu, Shaowen, Shen, Yang, Park, Taeyong, Woo, Hyeonuk, Yang, Jinsol, Kwon, Sohee, Won, Jonghun, Seok, Chaok, Kiyota, Yasuomi, Kobayashi, Shinpei, Harada, Yoshiki, Takeda-Shitaka, Mayuko, Kundrotas, Petras J., Singh, Amar, Vakser, Ilya A., Dapkūnas, Justas, Olechnovič, Kliment, Venclovas, Česlovas, Duan, Rui, Qiu, Liming, Xu, Xianjin, Zhang, Shuang, Zou, Xiaoqin, Wodak, Shoshana J.

المساهمون: Sub NMR Spectroscopy, Sub Overig UiLOTS, Sub Mathematics Education, NMR Spectroscopy

مصطلحات موضوعية: blind prediction, CAPRI, CASP, docking, oligomeric state, protein assemblies, protein complexes, protein docking, protein–protein interaction, template-based modeling, Taverne, Structural Biology, Biochemistry, Molecular Biology

وصف الملف: application/pdf

العلاقة: https://dspace.library.uu.nl/handle/1874/418962Test

الإتاحة: https://dspace.library.uu.nl/handle/1874/418962Test

المؤلفون: Inoue, Yosuke, Hanazono, Yuya, Noi, Kentaro, Kawamoto, Akihiro, Kimatsuka, Masato, Harada, Ryuhei, Takeda, Kazuki, Kita, Ryoichi, Iwamasa, Natsuki, Shibata, Kyoka, Noguchi, Keiichi, Shigeta, Yasuteru, Namba, Keiichi, Ogura, Teru, Miki, Kunio, Shinohara, Kyosuke, Yohda, Masafumi

المساهمون: Japan Science and Technology Agency, Japan Agency for Medical Research and Development, Japan Society for the Promotion of Science

المصدر: Structure ; volume 29, issue 7, page 721-730.e6 ; ISSN 0969-2126

مصطلحات موضوعية: Molecular Biology, Structural Biology

الإتاحة: https://doi.org/10.1016/j.str.2021.02.002Test
https://api.elsevier.com/content/article/PII:S0969212621000460?httpAccept=text/xmlTest
https://api.elsevier.com/content/article/PII:S0969212621000460?httpAccept=text/plainTest

المؤلفون: Hanazono, Yuya, Takeda, Kazuki, Miki, Kunio

المساهمون: 花園, 祐矢, 竹田, 一旗, 三木, 邦夫, 30332290

مصطلحات موضوعية: cotranslational folding, crystal structure, λ repressor

وصف الملف: application/pdf

العلاقة: http://hdl.handle.net/2433/236159Test; FEBS Open Bio; 1312; 1321

الإتاحة: http://hdl.handle.net/2433/236159Test

المؤلفون: Ohno, Hiraku, Takeda, Kazuki, Niwa, Satomi, Tsujinaka, Tomotaka, Hanazono, Yuya, Hirano, Yu, Miki, Kunio

المساهمون: 竹田, 一旗, 丹羽, 智美, 辻中, 智考, 花園, 祐矢, 平野, 優, 三木, 邦夫, 30332290

وصف الملف: application/pdf

العلاقة: http://hdl.handle.net/2433/227729Test; PLOS ONE; 12; e0178183

الإتاحة: http://hdl.handle.net/2433/227729Test