دورية أكاديمية

QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

التفاصيل البيبلوغرافية
العنوان: QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy
المؤلفون: Glyn Nelson (73268), Ulrike Boehm (11471560), Steve Bagley (11471563), Peter Bajcsy (4443532), Johanna Bischof (5978693), Claire M Brown (11471566), Aurélien Dauphin (700731), Ian M Dobbie (8330481), John E Eriksson (11471569), Orestis Faklaris (2330275), Julia Fernandez‐Rodriguez (11471572), Alexia Ferrand (9217127), Laurent Gelman (17254), Ali Gheisari (1773955), Hella Hartmann (11471575), Christian Kukat (106092), Alex Laude (5465357), Miso Mitkovski (527272), Sebastian Munck (355816), Alison J North (11471578), Tobias M Rasse (11471581), Ute Resch‐Genger (11471584), Lucas C Schuetz (11471587), Arne Seitz (484649), Caterina Strambio‐De‐Castillia (11471590), Jason R Swedlow (9478925), Ioannis Alexopoulos (8727732), Karin Aumayr (5851241), Sergiy Avilov (575857), Gert‐Jan Bakker (11471593), Rodrigo R Bammann (11471596), Andrea Bassi (118898), Hannes Beckert (11471599), Sebastian Beer (3325092), Yury Belyaev (1602943), Jakob Bierwagen (2260420), Konstantin A Birngruber (11471602), Manel Bosch (345777), Juergen Breitlow (11471605), Lisa A Cameron (11471608), Joe Chalfoun (11471611), James J Chambers (11471614), Chieh‐Li Chen (11471617), Eduardo Conde‐Sousa (11471620), Alexander D Corbett (11471623), Fabrice P Cordelieres (11471626), Elaine Del Nery (310455), Ralf Dietzel (11471629), Frank Eismann (11471632), Elnaz Fazeli (3119067), Andreas Felscher (11471635), Hans Fried (11471638), Nathalie Gaudreault (221057), Wah Ing Goh (11349446), Thomas Guilbert (11471641), Roland Hadleigh (11471644), Peter Hemmerich (144633), Gerhard A Holst (11471647), Michelle S Itano (11471650), Claudia B Jaffe (11471653), Helena K Jambor (11471656), Stuart C Jarvis (11471659), Antje Keppler (2391316), David Kirchenbuechler (11471662), Marcel Kirchner (11471665), Norio Kobayashi (2257063), Gabriel Krens (11471668), Susanne Kunis (11471671), Judith Lacoste (11471674), Marco Marcello (179994), Gabriel G Martins (11065896), Daniel J Metcalf (11471677), Claire A Mitchell (11471680), Joshua Moore (9416213), Tobias Mueller (204706), Michael S Nelson (11471683), Stephen Ogg (789586), Shuichi Onami (188778), Alexandra L Palmer (11471686), Perrine Paul‐Gilloteaux (11471689), Jaime A Pimentel (11471692), Laure Plantard (7045394), Santosh Podder (748284), Elton Rexhepaj (413523), Arnaud Royon (2264329), Markku A Saari (11471695), Damien Schapman (5846201), Vincent Schoonderwoert (11471698), Britta Schroth‐Diez (11471701), Stanley Schwartz (8543692), Michael Shaw (32616), Martin Spitaler (5276270), Martin T Stoeckl (11471704), Damir Sudar (24221), Jeremie Teillon (11471707), Stefan Terjung (11471710), Roland Thuenauer (509295), Christian D Wilms (11471713), Graham D Wright (11435812), Roland Nitschke (74660)
سنة النشر: 2021
المجموعة: Smithsonian Institution: Digital Repository
مصطلحات موضوعية: Imaging, confocal, light microscopy, metadata, quality assessment, quality control, reproducibility, widefield, LM, STP FC001999, Microscopy, 0204 Condensed Matter Physics, 0601 Biochemistry and Cell Biology, 0912 Materials Engineering
الوصف: A modern day light microscope has evolved from a tool devoted to making primarily empirical observations to what is now a sophisticated , quantitative device that is an integral part of both physical and life science research. Nowadays, microscopes are found in nearly every experimental laboratory. However, despite their prevalent use in capturing and quantifying scientific phenomena, neither a thorough understanding of the principles underlying quantitative imaging techniques nor appropriate knowledge of how to calibrate, operate and maintain microscopes can be taken for granted. This is clearly demonstrated by the well-documented and widespread difficulties that are routinely encountered in evaluating acquired data and reproducing scientific experiments. Indeed, studies have shown that more than 70% of researchers have tried and failed to repeat another scientist's experiments, while more than half have even failed to reproduce their own experiments. One factor behind the reproducibility crisis of experiments published in scientific journals is the frequent underreporting of imaging methods caused by a lack of awareness and/or a lack of knowledge of the applied technique. Whereas quality control procedures for some methods used in biomedical research, such as genomics (e.g. DNA sequencing, RNA-seq) or cytometry, have been introduced (e.g. ENCODE), this issue has not been tackled for optical microscopy instrumentation and images. Although many calibration standards and protocols have been published, there is a lack of awareness and agreement on common standards and guidelines for quality assessment and reproducibility. In April 2020, the QUality Assessment and REProducibility for instruments and images in Light Microscopy (QUAREP-LiMi) initiative was formed. This initiative comprises imaging scientists from academia and industry who share a common interest in achieving a better understanding of the performance and limitations of microscopes and improved quality control (QC) in light microscopy. The ultimate ...
نوع الوثيقة: article in journal/newspaper
اللغة: unknown
العلاقة: https://figshare.com/articles/journal_contribution/QUAREP_LiMi_A_community_driven_initiative_to_establish_guidelines_for_quality_assessment_and_reproducibility_for_instruments_and_images_in_light_microscopy/16669336Test
DOI: 10.25418/crick.16669336.v1
الإتاحة: https://doi.org/10.25418/crick.16669336.v1Test
حقوق: CC BY 4.0
رقم الانضمام: edsbas.2BD9A6E4
قاعدة البيانات: BASE