التفاصيل البيبلوغرافية
| العنوان: |
3D genomics across the tree of life reveals condensin II as a determinant of architecture type |
| المؤلفون: |
Hoencamp, Claire (10260187), Dudchenko, Olga (5583986), Elbatsh, Ahmed M.O. (10260190), Brahmachari, Sumitabha (10260193), Raaijmakers, Jonne A. (10260196), Schaik, Tom van (10260199), Cacciatore, Ángela Sedeño (10260202), Contessoto, Vinicius (10260205), Heesbeen, Roy G.H.P. van (10260208), Broek, Bram van den (10260211), Mhaskar, Aditya N. (10260214), Teunissen, Hans (10260217), Hilaire, Brian Glenn St (10260220), Weisz, David (10260223), Omer, Arina D. (10260226), Pham, Melanie (5583989), Colaric, Zane (10260229), Yang, Zhenzhen (10260232), Rao, Suhas S.P. (10260235), Mitra, Namita (10260238), Lui, Christopher (5583992), Yao, Weijie (10260241), Khan, Ruqayya (10260244), Moroz, Leonid L. (10260247), Kohn, Andrea (10260250), Leger, Judy St. (10260253), Mena, Alexandria (10260256), Holcroft, Karen (10260259), Gambetta, Maria Cristina (10260262), Lim, Fabian (10260265), Farley, Emma (10260268), Stein, Nils (10260271), Haddad, Alexander (10260274), Chauss, Daniel (10260277), Mutlu, Ayse Sena (10260280), Wang, Meng C. (10260283), Young, Neil D. (10260286), Hildebrandt, Evin (10260289), Cheng, Hans H. (10260292), Knight, Christopher J. (10260295), Burnham, Theresa L.U. (10260298), Hovel, Kevin A. (10260301), Beel, Andrew J. (10260304), Mattei, Pierre-Jean (10260307), Kornberg, Roger D. (10260310), Warren, Wesley C. (10260313), Cary, Gregory (10260316), Gómez-Skarmeta, José Luis (10260319), Hinman, Veronica (10260322), Maeshima, Kazuhiro (10260325), Multani, Asha S. (10260328), Pathak, Sen (10260331), Nel-Themaat, Liesl (10260334), Behringer, Richard R. (10260337), Kaur, Parwinder (5267980), Medema, René H. (10260340), Steensel, Bas van (10260343), Wit, Elzo de (10260346), Onuchic, José N. (10260349), Pierro, Michele Di (10260352), Aiden, Erez Lieberman (5583995), Rowland, Benjamin D. (10260355) |
| سنة النشر: |
2021 |
| المجموعة: |
Smithsonian Institution: Digital Repository |
| مصطلحات موضوعية: |
Cell Biology, Genetics, Molecular Biology, Pharmacology, Evolutionary Biology, Ecology, Sociology, Cancer, Computational Biology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, ACA, sample trajectory files, sequence, dynamic, determinant, WT, chromosome, conversion, ndb.rice.edu, cndb, fig, architecture type GAMinG script, life, python, hic maps, II, compaction |
| الوصف: |
GAMinG script (python) and sequence file (.dat) to prepare files to run molecular dynamics in GROMACS (see ndb.rice.edu for more info regarding how to run the simulations). Two .hic maps and two sample trajectory files for high and low lengthwise compaction (binary format, see ndb.rice.edu for the conversion of .cndb to other formats) corresponding to fig 4 in the main text. There are also two aggregate chromosome analysis (ACA) hic maps corresponding to lower (CAPH2) and higher (WT) compaction. |
| نوع الوثيقة: |
dataset |
| اللغة: |
unknown |
| العلاقة: |
https://figshare.com/articles/dataset/3D_genomics_across_the_tree_of_life_reveals_condensin_II_as_a_determinant_of_architecture_type/14169262Test |
| DOI: |
10.5281/zenodo.4582361 |
| الإتاحة: |
https://doi.org/10.5281/zenodo.4582361Test |
| حقوق: |
CC BY 4.0 |
| رقم الانضمام: |
edsbas.DA9BDD1E |
| قاعدة البيانات: |
BASE |
