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1دورية أكاديمية
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D Dixit
المصدر: PLoS Computational Biology, Vol 19, Iss 11, p e1011655 (2023)
مصطلحات موضوعية: Biology (General), QH301-705.5
وصف الملف: electronic resource
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2دورية أكاديمية
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s012Test
https://figshare.com/articles/journal_contribution/Details_of_the_implementation_of_GENERALIST_the_different_performance_metrics_as_well_as_the_models_used_for_benchmarking_/24644905Test -
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4صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s010Test
https://figshare.com/articles/figure/Comparison_of_the_distribution_of_fractional_Hamming_distances_between_the_generated_and_natural_sequences_for_DHFR_P53_and_MTOR_/24644899Test -
5صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s008Test
https://figshare.com/articles/figure/_i_r_i_sub_20_sub_comparison_between_different_models_for_DHFR_P53_and_MTOR_/24644893Test -
6صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s006Test
https://figshare.com/articles/figure/_i_r_i_sub_20_sub_of_different_latent_dimensions_of_VAE_/24644887Test -
7صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s003Test
https://figshare.com/articles/figure/Optimization_for_ArDCA_hyperparameters_/24644875Test -
8صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s009Test
https://figshare.com/articles/figure/Using_top_10_and_50_frequencies_for_average_Person_Correlation_for_BPTI_and_EGFR_/24644896Test -
9صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.g002Test
https://figshare.com/articles/figure/Optimization_for_the_latent_dimension_for_BPTI_left_panel_and_EGFR_right_panel_/24644911Test -
10صورة
المؤلفون: Hoda Akl, Brooke Emison, Xiaochuan Zhao, Arup Mondal, Alberto Perez, Purushottam D. Dixit
مصطلحات موضوعية: Biophysics, Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Immunology, Inorganic Chemistry, Infectious Diseases, Plant Biology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, unlike current methods, stable 3d structure, modeling moderately sized, low sequence coverage, informative latent space, corresponding natural ensembles, amino acid covariation, generative nonlinear tensor, accurate generative model, div >< p, protein sequence families, protein families, generative models, protein scientists, related obstacles, large proteins, important tool, factorization <
الإتاحة: https://doi.org/10.1371/journal.pcbi.1011655.s001Test
https://figshare.com/articles/figure/Optimization_for_the_latent_dimension_/24644866Test