المؤلفون: O. V. Andreenkova, N. V. Adonyeva, V. M. Efimov, N. E. Gruntenko, О. В. Андреенкова, Н. В. Адоньева, В. М. Ефимов, Н. Е. Грунтенко

المساهمون: The work was done with the support of the Russian Science Foundation grant No. 21-14-00090. The maintenance of experimental D. melanogaster lines was carried out in the Drosophila collection of the Institute of Cytology and Genetics SB RAS and was supported by BP #FWNR-2022-0019 of the Ministry of Science and Higher Education of the Russian Federation. Acknowledgements. The authors thank Darya Kochetova for the translation of the article.

المصدر: Vavilov Journal of Genetics and Breeding; Том 28, № 2 (2024); 185-189 ; Вавиловский журнал генетики и селекции; Том 28, № 2 (2024); 185-189 ; 2500-3259 ; 10.18699/vjgb-24-15

مصطلحات موضوعية: метаболизм ювенильного гормона, Wolbachia, jhamt, Jheh1, gene expression, fertility, juvenile hormone metabolism, экспрессия генов, плодовитость

وصف الملف: application/pdf

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Differential gene expression in Drosophila melanogaster and D. nigrosparsa infected with the same Wolbachia strain. Sci. Rep. 2021;11(1):11336. DOI 10.1038/s41598-021-90857-5; Flatt T., Tu M.P., Tatar M. Hormonal pleiotropy and the juvenile hormone regulation of Droso phila development and life history. Bio-Essays. 2005;27(10):999-1010. DOI 10.1002/bies.20290; Gruntenko N.E., Rauschenbach I.Y. Interplay of JH, 20E and biogenic amines under normal and stress conditions and its effects on reproduction. J. Insect Physiol. 2008;54(6):902-908. DOI 10.1016/j.jinsphys.2008.04.004; Gruntenko N.E., Khlebodarova T.M., Vasenkova I.A., Sukhanova M.J., Wilson T.G., Rauschenbach I.Y. Stress-reactivity of a Drosophila melanogaster strain with impaired juvenile hormone action. J. Insect Physiol. 2000;46(4):451-456. DOI 10.1016/s0022-1910(99)00131-6; Gruntenko N.E., Bownes M., Terashima J., Sukhanova M.Zh., Raushenbach I.Y. Heat stress affects oogenesis differently in wild-type Drosophila virilis and a mutant with altered juvenile hormone and 20-hydroxyecdysone levels. Insect. Mol. Biol. 2003a;12(4):393-404. DOI 10.1046/j.1365-2583.2003.00424.x; Gruntenko N.E., Chentsova N.A., Andreenkova E.V., Bownes M., Segal D., Adonyeva N.V., Rauschenbach I.Y. Stress response in a juvenile hormone-deficient Drosophila melanogaster mutant apterous56f. Insect Mol. Biol. 2003b;12(4):353-363. DOI 10.1046/j.1365-2583.2003.00419.x; Gruntenko N.E., Karpova E.K., Adonyeva N.V., Andreenkova O.V., Burdina E.V., Ilinsky Y.Y., Bykov R.A., Menshanov P.N., Rauschenbach I.Y. Drosophila female fertility and juvenile hormone metabolism depends on the type of Wolbachia infection. J. Exp. Biol. 2019; 222(Pt. 4):jeb195347. DOI 10.1242/jeb.195347; Guio L., Barron M.G., Gonzalez J. The transposable element Bari-Jheh mediates oxidative stress response in Drosophila. Mol. Ecol. 2014; 23(8):2020-2030. DOI 10.1111/mec.12711; Ilinsky Y.Y. Coevolution of Drosophila melanogaster mtDNA and Wolbachia genotypes. PLoS One. 2013;8(1):e54373. DOI 10.1371/journal.pone.0054373; Jindra M., Bellés X., Shinoda T. Molecular basis of juvenile hormone signaling. Curr. Opin. Insect Sci. 2015;11:39-46. DOI 10.1016/j.cois.2015.08.004; Kendall M.G., Stuart A. The Advanced Theory of Statistics. Vol. 2. Inference and Relationship. London: Charles Griffin, 1961; Korenskaia A.E., Shishkina O.D., Klimenko A.I., Andreenkova O.V., Bobrovskikh M.A., Shatskaya N.V., Vasiliev G.V., Gruntenko N.E. New Wolbachia pipientis genotype increasing heat stress resistance of Drosophila melanogaster host is char-acterized by a large chromosomal inversion. Int. J. Mol. Sci. 2022;23(24):16212. DOI 10.3390/ijms232416212; Lindsey A.R.I., Bhattacharya T., Hardy R.W., Newton I.L.G. Wolbachia and virus alter the host transcriptome at the interface of nucleotide metabolism pathways. mBio. 2021;12(1):e03472-20. DOI 10.1128/mBio.03472-20; Livak K.J., Schmittgen T.D. 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الإتاحة: https://doi.org/10.18699/vjgb-24-22Test
https://doi.org/10.18699/vjgb-24-15Test
https://doi.org/10.1134/S002209Test
https://doi.org/10.33396/1728-0869-2020-10-55-64Test
https://vavilov.elpub.ru/jour/article/view/4088Test

المؤلفون: V. M. Efimov, D. V. Rechkin, N. P. Goncharov, В. М. Ефимов, Д. В. Речкин, Н. П. Гончаров

المساهمون: This study was supported by the Russian Science Foundation (project No. 22-16-20026) and the Government of the Novosibirsk Region.

المصدر: Vavilov Journal of Genetics and Breeding; Том 28, № 2 (2024); 155-165 ; Вавиловский журнал генетики и селекции; Том 28, № 2 (2024); 155-165 ; 2500-3259 ; 10.18699/vjgb-24-15

مصطلحات موضوعية: скороспелость, global warming, models, next generation breeding, adaptability, earliness, глобальное потепление, модели, селекция будущего, адаптивность

وصف الملف: application/pdf

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الإتاحة: https://doi.org/10.18699/vjgb-24-18Test
https://doi.org/10.18699/vjgb-24-15Test
https://doi.org/10.26898/0370-8799-2018-2-11Test
https://doi.org/10.18699/VJGB-23-108Test
https://doi.org/10.18699/VJGB-22-81Test
https://doi.org/10.31857/S258755662002017XTest
https://vavilov.elpub.ru/jour/article/view/4085Test

المؤلفون: S. E. Smolenskaya, V. M. Efimov, Y. V. Kruchinina, B. F. Nemtsev, G. Y. Chepurnov, E. S. Ovchinnikova, I. A. Belan, E. V. Zuev, Chenxi Zhou, V. V. Piskarev, N. P. Goncharov, С. Э. Смоленская, В. М. Ефимов, Ю. В. Кручинина, Б. Ф. Немцев, Г. Ю. Чепурнов, Е. С. Овчинникова, И. А. Белан, Е. В. Зуев, Чэньси Чжоу, В. В. Пискарев, Н. П. Гончаров

المساهمون: The study was supported by the Russian Science Fundation (project No. 22-16-20026) and the Government of Novosibirsk region. Sequence analysis was performed at the “Genomika” Center for Collective Use of the Siberian Branch of the Russian Academy of Sciences (http://sequest.niboch.nsc.ruTest/). The authors thank Full Member of the RAS V.A. Zykin (Omsk Agricultural Research Center) for providing a collection of local cultivars of Western Siberia

المصدر: Vavilov Journal of Genetics and Breeding; Том 26, № 7 (2022); 662-674 ; Вавиловский журнал генетики и селекции; Том 26, № 7 (2022); 662-674 ; 2500-3259 ; 2500-0462 ; 10.18699/VJGB-22-72

مصطلحات موضوعية: селекция, Vrn genes, commercial and local cultivars, earliness, morphotype, breeding, гены Vrn, селекционные и местные сорта, скороспелость, морфотип

وصف الملف: application/pdf

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Allelic variation analysis at the vernalization response and photoperiod genes in Russian wheat varieties identified two novel alleles of Vrn-B3. Biomolecules. 2021;11(12):1897. DOI:10.3390/biom11121897.; Bespalova L.A., Borovik A.N., Kolesnikov F.A., Miroshnichenko T.Yu. Stages and results of breeding of shpaerococcum triticale (T. sphaerococcum Perc.) in Krasnodar RIA after P.P. Lukyanenko. Zernovoe Khozjaistvo Rossii = Grain Economy of Russia. 2015;2:85-93. (in Russian); Catalog of Varieties of Agricultural Crops Produced by Scientists of Siberia and Included in the State Register of the Russian Federation (zoned) in 1929–2008. (Compiled by P.L. Goncharov et al.). Novosibirsk, 2009. (in Russian); Catalogue of Varieties of Spring Soft Wheat by Genotypes of the Vrn Loci System (Sensitivity to Vernalization). Odessa: Plant Breeding and Genetics Institute, 1987. (in Russian); Cho E., Kang C.-S., Yoon Y.M., Park C.S. The relationship between allelic variations of Vrn-1 and Ppd-1 and agronomic traits in Korean wheat cultivars. Indian J. Genet. 2015;75(3):294-300. DOI:10.5958/0975-6906.2015.00046.2.; Diaz A., Zikhali M., Turner A.S., Isaac P., Laurie D.A. Copy number variation affecting the Photoperiod-B1 and Vernalization-A1 genes is associated with altered flowering time in wheat (Triticum aestivum). PloS One. 2012;7(3):e33234. DOI:10.1371/journal.pone.0033234.; Dorofeev V.F., Filatenko A.A., Migushova E.F., Udachin R.A., Yakubtsiner M.M. Flora of Cultivated Plants of USSR. Vol. 1. Wheat. Leningrad: Kolos Publ., 1979. (in Russian); Dragovich A.Y., Yankovskaya A.A., Fisenko A.V. Vernalization (VRN) and photoperiod (PPD) genes in spring hexaploid wheat landraces. Russ. J. Genet. 2021;57(3):329-340. DOI:10.1134/S1022795421030066.; Dzhalpakova K.D., Bersimbaev R.I., Goncharov N.P. Genetic control of growth habit in common wheat cultivars from Kazakhstan. Genetika (Moscow). 1996;32(1):62-66.; Dzhalpakova K.D., Goncharov N.P., Bersimbaev R.I. Genetics of growth habit and earliness in Kazakhstan and West Siberian durum wheat. Russ. Agr. Sci. 1995;3:6-10.; Efremova T.T., Chumanova E.V., Trubacheeva N.V., Arbuzova V.S., Pershina L.A., Belan I.A. Prevalence of VRN1 locus alleles among spring common wheat cultivars cultivated in Western Siberia. Russ. J. Genet. 2016;52(2):146-153. DOI:10.1134/S102279541601004X.; Fait V.I., Stelmakh A.F. Genetic control of the habit and rate of spring wheat development in West Siberia. Part I. Identification of dominant alleles of development type genes. Sibirskiy Vestnik Sel’skokhozyaystvennoy Nauki = Siberian Herald of Agricultural Sciences. 1993;2:32-36. (in Russian); Fomenko M.A., Grabovets A.I. A new generation of winter wheat varieties breeding Don SNIISH. Zernobobovye i Krupyanye Kul’tury = Legumes and Groat Crops. 2016;4(20):85-90. (in Russian); Garcia M., Eckermann P., Haefele S., Satija S., Sznajder B., Timmins A., Baumann U., Wolters P., Mather D.E., Fleury D. Genome-wide association mapping of grain yield in a diverse collection of spring wheat (Triticum aestivum L.) evaluated in southern Australia. PLoS One. 2019;14(2):e0211730. DOI:10.1371/journal.pone.0211730.; Genotypes of Accessions of Spring Soft Wheat by Genes Controlling the Habit of Development. Catalog of the World Collection of VIR. Iss. 427. Leningrad: VNIIR, 1985. (in Russian); Golovnina K.A., Kondratenko E.Ya., Blinov A.G., Goncharov N.P. Molecular characterization of vernalization loci VRN1 in wild and cultivated wheats. BMC Plant Biol. 2010;10:168. DOI:10.1186/1471-2229-10-168.; Gomez D., Vanzetti L., Helguera M., Lombardo L., Fraschina J., Miralles D.J. Effect of Vrn-1, Ppd-1 genes and earliness per se on heading time in Argentinean bread wheat cultivars. Field Crops Res. 2014;158:73-81. DOI:10.1016/j.fcr.2013.12.023.; Goncharov N.P. Genetic resources of wheat related species: The Vrn genes controlling growth habit (spring vs. winter). Euphytica. 1998;100:371-376. DOI:10.1023/A:1018323600077.; Goncharov N.P. Genetics of growth habit (spring vs. winter) in common wheat: confirmation of the existence of dominant gene Vrn4. Theor. Appl. Genet. 2003;107(4):768-772. DOI:10.1007/s00122-003-1317-x.; Goncharov N.P. Genus Triticum L. taxonomy: the present and the future. Plant Syst. Evol. 2011;295:1-11. DOI:10.1007/s00606-011-0480-9.; Goncharov N.P. Comparative Genetics of Wheats and their Related Species. 2nd edn. Novosibirsk: Acad. Publ. House “Geo”, 2012. (in Russian); Goncharov N.P., Chikida N.N. Genetics of the growth habit in Aegilops squarrosa L. Genetika (Moscow). 1995;31(3):343-346.; Goncharov N.P., Efimov V.M. The principal components of the duration of the shoots–heading period trait in common wheat. In: Characteristics of the Genomes of Some Species of Agricultural Plants. Novosibirsk: ICG Publ., 1990;75-86. 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الإتاحة: https://doi.org/10.18699/VJGB-22-81Test
https://doi.org/10.18699/VJGB-22-72Test
https://doi.org/10.15407/agrisp8.01.003Test
https://doi.org/10.1007/s00122-007-0603-4Test
https://doi.org/10.30766/2072-9081.2021.22.4.449-465Test
https://doi.org/10.3390/biom11121897Test
https://doi.org/10.5958/0975-6906.2015.00046.2Test
https://doi.org/10.1371/journal.pone.0033234Test
https://doi.org/10.1134/S1022795421030066Test
https://doi.org/10.1134/S102279541601004XTest

المؤلفون: V. M. Efimov, K. V. Efimov, V. Y. Kovaleva, В. М. Ефимов, К. В. Ефимов, В. Ю. Ковалева

المساهمون: Supported by Russian Foundation for Basic Research (# 19-07-00658). The authors are grateful to D.A. Afonnikov, P.N. Menshanov and two anonymous reviewers for useful discussion and constructive comments.

المصدر: Vavilov Journal of Genetics and Breeding; Том 23, № 8 (2019); 1032-1036 ; Вавиловский журнал генетики и селекции; Том 23, № 8 (2019); 1032-1036 ; 2500-3259 ; 2500-0462

مصطلحات موضوعية: p-дистанция, SVD, PCA, PCo, MDS, SSA, molecular sequences, p-distance, молекулярные последовательности

وصف الملف: application/pdf

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الإتاحة: https://doi.org/10.18699/VJ19.584Test
https://vavilov.elpub.ru/jour/article/view/2395Test

المؤلفون: V. M. Efimov, V. Yu. Kovaleva, Yu. N. Litvinov, В. М. Ефимов, В. Ю. Ковалева, Ю. Н. Литвинов

المساهمون: СО РАН, РФФИ

المصدر: Vavilov Journal of Genetics and Breeding; Том 20, № 6 (2016); 816-822 ; Вавиловский журнал генетики и селекции; Том 20, № 6 (2016); 816-822 ; 2500-3259 ; 2500-0462

مصطلحات موضوعية: евклидово пространство, mtDNA, nuclear DNA, DJ-method, Phylogenetics, Euclidean space, мтДНК, яДНК, DJ-метод, филогенетика

وصف الملف: application/pdf

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الإتاحة: https://doi.org/10.18699/VJ16.153Test
https://doi.org/10.1371/journal.pone.0094279Test
https://doi.org/10.1146/annurev.ecolsys.33.010802.150511Test
https://doi.org/10.1007/s00407-013-0127-zTest
https://doi.org/10.1093/sysbio/syq072Test
https://doi.org/10.1007/s00239-009-9212-yTest
https://doi.org/10.1111/j.1365-2907.1991.tb00284.xTest
https://doi.org/10.1038/nrg1603Test
https://doi.org/10.1016/j.ympev.2008.12.008Test
https://doi.org/10.1006/mpev.1998.0568Test