Genome-wide association analysis identifies TXNRD2, ATXN2 and FOXC1 as susceptibility loci for primary open-angle glaucoma

التفاصيل البيبلوغرافية
العنوان: Genome-wide association analysis identifies TXNRD2, ATXN2 and FOXC1 as susceptibility loci for primary open-angle glaucoma
المؤلفون: Qibin Qi, Shamira A. Perera, Bernd Wissinger, Paul Mitchell, Christopher J Hammond, Janey L. Wiggs, Frank B. Hu, Donald J. Zack, Murray H. Brilliant, Ching-Yu Cheng, Paul M. Ridker, Pirro G. Hysi, Brian L. Yaspan, Tony Realini, Margaret A. Pericak-Vance, Fotis Topouzis, Eranga N. Vithana, Jessica N. Cooke Bailey, Andrew A. Brown, Gadi Wollstein, Robert N. Weinreb, Jie Jin Wang, Chiea Chuen Khor, Stephanie Loomis, Puya Gharahkhani, David J. Hunter, Stuart MacGregor, Robert Ritch, Hyon K. Choi, Paul R. Lichter, William G. Christen, Hugues Aschard, Yutao Liu, R. Rand Allingham, Douglas E. Gaasterland, Julia E. Richards, Ananth C. Viswanathan, Marylyn D. Ritchie, Eric B. Rimm, Louis R. Pasquale, Yeunjoo E. Song, Robert P. Igo, Shefali S. Verma, John H. Fingert, Kang Zhang, Gary C. Curhan, Paul J. Foster, Peter Kraft, Charles S. Fuchs, Michael A. Hauser, Immaculata De Vivo, Kathryn P. Burdon, Daniel I. Chasman, Kerrin S. Small, Keating W. Pepper, Kuldev Singh, Rulla M. Tamimi, Alfonso Buil, Peter McGuffin, Alex W. Hewitt, Sayoko E. Moroi, Donald L. Budenz, Richard K. Lee, Nicole Weisschuh, Arthur J. Sit, David A. Mackey, Anthony P Khawaja, William K. Scott, Joel S. Schuman, Terry Gaasterland, Douglas Vollrath, Tien Yin Wong, Craig A. Glastonbury, Zheng Li, Allison E. Ashley-Koch, Jae H. Kang, Jamie E Craig, Jonathan L. Haines, Tin Aung, Gareth R. Howell
المساهمون: Case Western Reserve University [Cleveland], Harvard Medical School [Boston] (HMS), Singapore Eye Research Institute [Singapore] (SERI), Genome Institute of Singapore (GIS), Flinders University [Adelaide, Australia], Brigham and Women's Hospital [Boston]
المصدر: Nature Genetics
Nature Genetics, Nature Publishing Group, 2016, 48 (2), pp.189-194. ⟨10.1038/ng.3482⟩
Nature genetics
بيانات النشر: HAL CCSD, 2016.
سنة النشر: 2016
مصطلحات موضوعية: 0301 basic medicine, Open angle glaucoma, Thioredoxin Reductase 2, Glaucoma, Genome-wide association study, Single-nucleotide polymorphism, Biology, Polymorphism, Single Nucleotide, Retinal ganglion, Article, 03 medical and health sciences, 0302 clinical medicine, Polymorphism (computer science), MESH: Forkhead Transcription Factors, Genetics, medicine, Humans, Genetic Predisposition to Disease, Ataxin-2, [STAT.AP]Statistics [stat]/Applications [stat.AP], MESH: Humans, MESH: Polymorphism, Single Nucleotide, MESH: Genetic Predisposition to Disease, Forkhead Transcription Factors, Odds ratio, MESH: Thioredoxin Reductase 2, medicine.disease, 3. Good health, 030104 developmental biology, [SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics, MESH: Ataxin-2, MESH: Genome-Wide Association Study, 030221 ophthalmology & optometry, Optic nerve, MESH: Glaucoma, Open-Angle, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], [STAT.ME]Statistics [stat]/Methodology [stat.ME], Glaucoma, Open-Angle, Genome-Wide Association Study
الوصف: International audience; Primary open-angle glaucoma (POAG) is a leading cause of blindness worldwide. To identify new susceptibility loci, we performed meta-analysis on genome-wide association study (GWAS) results from eight independent studies from the United States (3,853 cases and 33,480 controls) and investigated the most significantly associated SNPs in two Australian studies (1,252 cases and 2,592 controls), three European studies (875 cases and 4,107 controls) and a Singaporean Chinese study (1,037 cases and 2,543 controls). A meta-analysis of the top SNPs identified three new associated loci: rs35934224[T] in TXNRD2 (odds ratio (OR) = 0.78, P = 4.05 × 10(-11)) encoding a mitochondrial protein required for redox homeostasis; rs7137828[T] in ATXN2 (OR = 1.17, P = 8.73 × 10(-10)); and rs2745572[A] upstream of FOXC1 (OR = 1.17, P = 1.76 × 10(-10)). Using RT-PCR and immunohistochemistry, we show TXNRD2 and ATXN2 expression in retinal ganglion cells and the optic nerve head. These results identify new pathways underlying POAG susceptibility and suggest new targets for preventative therapies.
اللغة: English
تدمد: 1061-4036
1546-1718
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ea58750950c32ae326ace8b1d0e5a44eTest
https://hal-pasteur.archives-ouvertes.fr/pasteur-03278582Test
حقوق: OPEN
رقم الانضمام: edsair.doi.dedup.....ea58750950c32ae326ace8b1d0e5a44e
قاعدة البيانات: OpenAIRE