Testosterone Pathway Genetic Polymorphisms in Relation to Primary Open-Angle Glaucoma: An Analysis in Two Large Datasets
| العنوان: | Testosterone Pathway Genetic Polymorphisms in Relation to Primary Open-Angle Glaucoma: An Analysis in Two Large Datasets |
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| المؤلفون: | R. Rand Allingham, Douglas J Rhee, Julia E. Richards, Donald J. Zack, Mariusz Butkiewicz, Margaret A. Pericak-Vance, Janey L. Wiggs, Richard K. Lee, William K. Scott, Hugues Aschard, Lisa A Hark, Arthur J. Sit, Alex W. Hewitt, Felipe A. Medeiros, Gadi Wollstein, Sayoko E. Moroi, Louis R. Pasquale, Jessica N. Cooke Bailey, Murray H. Brilliant, Stuart MacGregor, Donald L. Budenz, William G. Christen, John H. Fingert, Yeunjoo E. Song, Jamie E Craig, Thasarat S. Vajaranant, Tony Realini, David A. Sullivan, Daniel I. Chasman, Peter Kraft, Jonathan L. Haines, Robert P. Igo, Jae H. Kang, Robert N. Weinreb, Joel S. Schuman, Kuldev Singh, Robert Ritch, Kathryn P. Burdon, Yutao Liu, Puya Gharahkhani, David A. Mackey, Michael A. Hauser, Terry Gaasterland, Douglas Vollrath, Bernard Rosner, Allison E. Ashley-Koch |
| المساهمون: | Harvard Medical School [Boston] (HMS), University of California [San Diego] (UC San Diego), University of California, Harvard T.H. Chan School of Public Health |
| المصدر: | Investigative Ophthalmology & Visual Science Investigative Ophthalmology & Visual Science, Association for Research in Vision and Ophthalmology, 2018, 59 (2), pp.629. ⟨10.1167/iovs.17-22708⟩ Investigative ophthalmology & visual science, vol 59, iss 2 |
| بيانات النشر: | HAL CCSD, 2018. |
| سنة النشر: | 2018 |
| مصطلحات موضوعية: | Male, 0301 basic medicine, primary open-angle glaucoma, genetic structures, Datasets as Topic, Genome-wide association study, Ophthalmology & Optometry, Medical and Health Sciences, MESH: Genotype, 0302 clinical medicine, Gene Frequency, genetics, MESH: Datasets as Topic, Low Tension Glaucoma, MESH: Low Tension Glaucoma, Genetics, [STAT.AP]Statistics [stat]/Applications [stat.AP], MESH: Middle Aged, MESH: Polymorphism, Single Nucleotide, Single Nucleotide, Middle Aged, Biological Sciences, Pathway analysis, pathway analysis, Open-Angle, Female, [STAT.ME]Statistics [stat]/Methodology [stat.ME], Glaucoma, Open-Angle, Metabolic Networks and Pathways, Genotype, Open angle glaucoma, MESH: Testosterone, Single-nucleotide polymorphism, Biology, Polymorphism, Single Nucleotide, Australian and New Zealand Registry of Advanced Glaucoma (ANZRAG) Consortium, 03 medical and health sciences, MESH: Intraocular Pressure, MESH: Gene Frequency, Humans, Polymorphism, 1000 Genomes Project, Estrogen Metabolism, Allele frequency, Intraocular Pressure, MESH: Humans, Glaucoma, Testosterone (patch), eye diseases, MESH: Male, 030104 developmental biology, [SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics, MESH: Metabolic Networks and Pathways, testosterone, MESH: Genome-Wide Association Study, 030221 ophthalmology & optometry, MESH: Glaucoma, Open-Angle, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie, sense organs, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], MESH: Female, Genome-Wide Association Study |
| الوصف: | Author(s): Bailey, Jessica N Cooke; Gharahkhani, Puya; Kang, Jae H; Butkiewicz, Mariusz; Sullivan, David A; Weinreb, Robert N; Aschard, Hugues; Allingham, R Rand; Ashley-Koch, Allison; Lee, Richard K; Moroi, Sayoko E; Brilliant, Murray H; Wollstein, Gadi; Schuman, Joel S; Fingert, John H; Budenz, Donald L; Realini, Tony; Gaasterland, Terry; Scott, William K; Singh, Kuldev; Sit, Arthur J; Igo, Robert P; Song, Yeunjoo E; Hark, Lisa; Ritch, Robert; Rhee, Douglas J; Vollrath, Douglas; Zack, Donald J; Medeiros, Felipe; Vajaranant, Thasarat S; Chasman, Daniel I; Christen, William G; Pericak-Vance, Margaret A; Liu, Yutao; Kraft, Peter; Richards, Julia E; Rosner, Bernard A; Hauser, Michael A; Craig, Jamie E; Burdon, Kathryn P; Hewitt, Alex W; Mackey, David A; Haines, Jonathan L; MacGregor, Stuart; Wiggs, Janey L; Pasquale, Louis R; Australian and New Zealand Registry of Advanced Glaucoma (ANZRAG) Consortium | Abstract: Purpose:Sex hormones may be associated with primary open-angle glaucoma (POAG), although the mechanisms are unclear. We previously observed that gene variants involved with estrogen metabolism were collectively associated with POAG in women but not men; here we assessed gene variants related to testosterone metabolism collectively and POAG risk. Methods:We used two datasets: one from the United States (3853 cases and 33,480 controls) and another from Australia (1155 cases and 1992 controls). Both datasets contained densely called genotypes imputed to the 1000 Genomes reference panel. We used pathway- and gene-based approaches with Pathway Analysis by Randomization Incorporating Structure (PARIS) software to assess the overall association between a panel of single nucleotide polymorphisms (SNPs) in testosterone metabolism genes and POAG. In sex-stratified analyses, we evaluated POAG overall and POAG subtypes defined by maximum IOP (high-tension [HTG] or normal tension glaucoma [NTG]). Results:In the US dataset, the SNP panel was not associated with POAG (permuted P = 0.77), although there was an association in the Australian sample (permuted P = 0.018). In both datasets, the SNP panel was associated with POAG in men (permuted P ≤ 0.033) and not women (permuted P ≥ 0.42), but in gene-based analyses, there was no consistency on the main genes responsible for these findings. In both datasets, the testosterone pathway association with HTG was significant (permuted P ≤ 0.011), but again, gene-based analyses showed no consistent driver gene associations. Conclusions:Collectively, testosterone metabolism pathway SNPs were consistently associated with the high-tension subtype of POAG in two datasets. |
| وصف الملف: | application/pdf |
| اللغة: | English |
| تدمد: | 0146-0404 1552-5783 |
| الوصول الحر: | https://explore.openaire.eu/search/publication?articleId=doi_dedup___::085d9740d37a72c5216216334f75d84cTest https://hal-pasteur.archives-ouvertes.fr/pasteur-03278714Test |
| حقوق: | OPEN |
| رقم الانضمام: | edsair.doi.dedup.....085d9740d37a72c5216216334f75d84c |
| قاعدة البيانات: | OpenAIRE |
| تدمد: | 01460404 15525783 |
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