المؤلفون: Ovaskainen, Otso, Abrego, Nerea, Furneaux, Brendan, Hardwick, Bess, Somervuo, Panu, Palorinne, Isabella, Andrew, Nigel, Babiy, Ulyana, Bao, Tan, Bazzano, Gisela, Bondarchuk, Svetlana, Bonebrake, Timothy, Brennan, Georgina, Bret-Harte, Syndonia, Bässler, Claus, Cagnolo, Luciano, Cameron, Erin, Chapurlat, Elodie, Creer, Simon, DAcqui, Luigi, de Vere, Natasha, Desprez-Loustau, Marie-Laure, Dongmo, Michel, Dyrholm Jacobsen, Ida, Fisher, Brian, Flores de Jesus, Miguel, Griffith, Gareth, Gritsuk, Anna, Gross, Andrin, Grudd, Håkan, Halme, Panu, Hanna, Rachid, Hansen, Jannik, Hansen, Lars, Hegbe, Apollon, Hill, Sarah, Hogg, Ian, Hultman, Jenni, Hyde, Kevin, Hynson, Nicole, Ivanova, Natalia, Karisto, Petteri, Kerdraon, Deirdre, Knorre, Anastasia, Krisai-Greilhuber, Irmgard, Kurhinen, Juri, Kuzmina, Masha, Lecomte, Nicolas, Lecomte, Erin, Loaiza, Viviana, Lundin, Erik, Meire, Alexander, Mešić, Armin, Miettinen, Otto, Monkhause, Norman, Mortimer, Peter, Müller, Jörg, Nilsson, R, Nonti, Puani, Nordén, Jenni, Nordén, Björn, Paz, Claudia, Pellikka, Petri, Pereira, Danilo, Petch, Geoff, Pitkänen, Juha-Matti, Popa, Flavius, Potter, Caitlin, Purhonen, Jenna, Pätsi, Sanna, Rafiq, Abdullah, Raharinjanahary, Dimby, Rakos, Niklas, Rathnayaka, Achala, Raundrup, Katrine, Rebriev, Yury, Rikkinen, Jouko, Rogers, Hanna, Rogovsky, Andrey, Rozhkov, Yuri, Runnel, Kadri, Saarto, Annika, Savchenko, Anton, Schlegel, Markus, Schmidt, Niels, Seibold, Sebastian, Skjøth, Carsten, Stengel, Elisa, Sutyrina, Svetlana, Syvänperä, Ilkka, Tedersoo, Leho, Timm, Jebidiah, Tipton, Laura, Toju, Hirokazu, Uscka-Perzanowska, Maria, van der Bank, Michelle, Herman van der Bank, F, Vandenbrink, Bryan, Ventura, Stefano, Vignisson, Solvi

المصدر: Scientific Data. 11(1)

مصطلحات موضوعية: Air Microbiology, Spores, Fungal, DNA, Fungal, Fungi, Biodiversity

الوصف: Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.

وصف الملف: application/pdf

الوصول الحر: https://escholarship.org/uc/item/7nc2n2kdTest
https://escholarship.org/content/qt7nc2n2kd/qt7nc2n2kd.pdfTest

المؤلفون: Otso Ovaskainen, Nerea Abrego, Brendan Furneaux, Bess Hardwick, Panu Somervuo, Isabella Palorinne, Nigel R. Andrew, Ulyana V. Babiy, Tan Bao, Gisela Bazzano, Svetlana N. Bondarchuk, Timothy C. Bonebrake, Georgina L. Brennan, Syndonia Bret-Harte, Claus Bässler, Luciano Cagnolo, Erin K. Cameron, Elodie Chapurlat, Simon Creer, Luigi P. D’Acqui, Natasha de Vere, Marie-Laure Desprez-Loustau, Michel A. K. Dongmo, Ida B. Dyrholm Jacobsen, Brian L. Fisher, Miguel Flores de Jesus, Gregory S. Gilbert, Gareth W. Griffith, Anna A. Gritsuk, Andrin Gross, Håkan Grudd, Panu Halme, Rachid Hanna, Jannik Hansen, Lars Holst Hansen, Apollon D. M. T. Hegbe, Sarah Hill, Ian D. Hogg, Jenni Hultman, Kevin D. Hyde, Nicole A. Hynson, Natalia Ivanova, Petteri Karisto, Deirdre Kerdraon, Anastasia Knorre, Irmgard Krisai-Greilhuber, Juri Kurhinen, Masha Kuzmina, Nicolas Lecomte, Erin Lecomte, Viviana Loaiza, Erik Lundin, Alexander Meire, Armin Mešić, Otto Miettinen, Norman Monkhause, Peter Mortimer, Jörg Müller, R. Henrik Nilsson, Puani Yannick C. Nonti, Jenni Nordén, Björn Nordén, Claudia Paz, Petri Pellikka, Danilo Pereira, Geoff Petch, Juha-Matti Pitkänen, Flavius Popa, Caitlin Potter, Jenna Purhonen, Sanna Pätsi, Abdullah Rafiq, Dimby Raharinjanahary, Niklas Rakos, Achala R. Rathnayaka, Katrine Raundrup, Yury A. Rebriev, Jouko Rikkinen, Hanna M. K. Rogers, Andrey Rogovsky, Yuri Rozhkov, Kadri Runnel, Annika Saarto, Anton Savchenko, Markus Schlegel, Niels Martin Schmidt, Sebastian Seibold, Carsten Skjøth, Elisa Stengel, Svetlana V. Sutyrina, Ilkka Syvänperä, Leho Tedersoo, Jebidiah Timm, Laura Tipton, Hirokazu Toju, Maria Uscka-Perzanowska, Michelle van der Bank, F. Herman van der Bank, Bryan Vandenbrink, Stefano Ventura, Solvi R. Vignisson, Xiaoyang Wang, Wolfgang W. Weisser, Subodini N. Wijesinghe, S. Joseph Wright, Chunyan Yang, Nourou S. Yorou, Amanda Young, Douglas W. Yu, Evgeny V. Zakharov, Paul D. N. Hebert, Tomas Roslin

المصدر: Scientific Data, Vol 11, Iss 1, Pp 1-17 (2024)

مصطلحات موضوعية: Science

الوصف: Abstract Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.

وصف الملف: electronic resource

العلاقة: https://doaj.org/toc/2052-4463Test

الوصول الحر: https://doaj.org/article/a665cd3f632448dbad13496c3a4720f6Test

المؤلفون: Boethius, H, Saarto, T, Laurell, G, Farnebo, L, Makitie, AA

المصدر: European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery. 278(4):2027-2032

مصطلحات موضوعية: Medicin och hälsovetenskap

الوصول الحر: http://kipublications.ki.se/Default.aspx?queryparsed=id:144555969Test

المؤلفون: Biganzoli, L, Cardoso, F, Beishon, M, Cameron, D, Cataliotti, L, Coles, CE, Bolton, RCD, Trill, MD, Erdem, S, Fjell, M, Geiss, R, Goossens, M, Kuhl, C, Marotti, L, Naredi, P, Oberst, S, Palussiere, J, Ponti, A, Del Turco, MR, Rubio, IT, Sapino, A, Senkus-Konefka, E, Skelin, A, Sousa, B, Saarto, T, Costa, A, Poortmans, P

المصدر: Breast (Edinburgh, Scotland). 51:65-84

مصطلحات موضوعية: Medicin och hälsovetenskap

الوصول الحر: http://kipublications.ki.se/Default.aspx?queryparsed=id:143641311Test

المؤلفون: Lehtomaki, K, Stedt, HP, Osterlund, E, Muhonen, T, Soveri, LM, Halonen, P, Salminen, TK, Kononen, J, Kallio, R, Algars, A, Heerva, E, Lamminmaki, A, Uutela, A, Nordin, A, Lehto, J, Saarto, T, Sintonen, H, Kellokumpu-Lehtinen, PL, Ristamaki, R, Glimelius, B, Isoniemi, H, Osterlund, P

المصدر: Cancers. 14(7)

مصطلحات موضوعية: Medicin och hälsovetenskap

الوصول الحر: http://kipublications.ki.se/Default.aspx?queryparsed=id:149311185Test

المؤلفون: Mroueh, R, Haapaniemi, A, Saarto, T, Gronholm, L, Grenman, R, Salo, T, Makitie, AA

المصدر: European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery. 276(7):2039-2045

مصطلحات موضوعية: Medicin och hälsovetenskap

الوصول الحر: http://kipublications.ki.se/Default.aspx?queryparsed=id:141183666Test

المؤلفون: M. Filioglou, A. Leskinen, V. Vakkari, E. O'Connor, M. Tuononen, P. Tuominen, S. Laukkanen, L. Toiviainen, A. Saarto, X. Shang, P. Tiitta, M. Komppula

المصدر: Atmospheric Chemistry and Physics, Vol 23, Pp 9009-9021 (2023)

مصطلحات موضوعية: Physics, QC1-999, Chemistry, QD1-999

الوصف: Active remote sensors equipped with the capability to detect polarization, a shape-relevant parameter, are essential to aerosol particle identification in the vertical domain. Most commonly, the linear particle depolarization ratio has been available at the shorter wavelengths of 355 and/or 532 nm. Recently, linear particle depolarization ratios at longer wavelengths (910, 1064, and 1565 nm) have emerged in lidar aerosol research. In this study, a synergy of three lidars, namely a PollyXT lidar, a Vaisala CL61 ceilometer, and a HALO Photonics StreamLine Pro Doppler lidar, as well as in situ aerosol and pollen observations have been utilized to investigate the spectral dependence of birch and pine pollen particles. We found that, regardless of the pollen type, the linear particle depolarization ratio was subject to the amount of pollen and its relative contribution to the aerosol mixture in the air. More specifically, during birch pollination, characteristic linear particle depolarization ratios of 5 ± 2 % (355 nm), 28 ± 6 % (532 nm), 23 ± 6 % (910 nm), and 33 ± 4 % (1565 nm) were retrieved at the pollen layer. Regarding the pine-dominant period, characteristic linear particle depolarization ratios of 6 ± 2 %, 43 ± 11 %, 22 ± 6 %, and 26 ± 3 % were determined at wavelengths of 355, 532, 910, and 1565 nm, respectively. For birch, the linear particle depolarization ratio at 1565 nm was the highest, followed by the 532 and 910 nm wavelengths, respectively. A sharp decrease at 355 nm was evident for birch pollen. For pine pollen, a maximum at the 532 nm wavelength was observed. There was no significant change in the linear particle depolarization ratio at 910 nm for the pollen types considered in this study. Given the low concentration of pollen in the air, the inclusion of the longer wavelengths (910 and 1565 nm) for the detection of birch and pine can be beneficial due to their sensitivity to trace large aerosol particles.

وصف الملف: electronic resource

العلاقة: https://acp.copernicus.org/articles/23/9009/2023/acp-23-9009-2023.pdfTest; https://doaj.org/toc/1680-7316Test; https://doaj.org/toc/1680-7324Test

الوصول الحر: https://doaj.org/article/b3583426272c4446bb20fa7c97f58055Test

المؤلفون: Alberro, JA, Ballester, B, Deulofeu, P, Fabregas, R, Fraile, M, Gubern, JM, Janer, J, Moral, A, de Pablo, JL, Penalva, G, Puig, P, Ramos, M, Rojo, R, Santesteban, P, Serra, C, Sola, M, Solarnau, L, Solsona, J, Veloso, E, Vidal, S, Abe, O, Abe, R, Enomoto, K, Kikuchi, K, Koyama, H, Masuda, H, Nomura, Y, Ohashi, Y, Sakai, K, Sugimachi, K, Toi, M, Tominaga, T, Uchino, J, Yoshida, M, Coles, CE, Haybittle, JL, Mobus, V, Leonard, CF, Calais, G, Garaud, P, Collett, V, Davies, C, Delmestri, A, Sayer, J, Harvey, VJ, Holdaway, IM, Kay, RG, Mason, BH, Forbe, JF, Franci, PA, Wilcken, N, Balic, M, Bartsch, R, Fesl, C, Fitzal, F, Fohler, H, Gnant, M, Greil, R, Jakesz, R, Marth, C, Mlineritsch, B, Pfeiler, G, Singer, CF, Steger, GG, Stoger, H, Canney, P, Yosef, HMA, Focan, C, Peek, U, Oates, GD, Powell, J, Durand, M, Mauriac, L, Di Leo, A, Dolci, S, Larsimont, D, Nogaret, JM, Philippson, C, Piccart, MJ, Masood, MB, Parker, D, Price, JJ, Lindsay, MA, Mackey, J, Martin, M, Hupperets, PSGJ, Bates, T, Blamey, RW, Chetty, U, Ellis, IO, Mallon, E, Morgan, DAL, Patnick, J, Pinder, S, Lohrisch, C, Nichol, A, Bartlett, JMS, Bramwell, VH, Chen, BE, Chia, SKL, Gelmon, K, Goss, PE, Levine, MN, Parulekar, W, Pater, JL, Pritchard, KI, Shepherd, LE, Tu, D, Whelan, T, Berry, D, Broadwater, G, Cirrincione, C, Muss, H, Norton, L, Weiss, RB, Abu-Zahara, HT, Karpov, A, Portnoj, SL, Bowden, S, Brookes, C, Dunn, J, Fernando, I, Lee, M, Poole, C, Rea, D, Spooner, D, Barrett-Lee, PJ, Manse, RE, Monypenny, IJ, Gordon, NH, Davis, HL, Cuzick, J, Sestak, I, Lehingue, Y, Romestaing, P, Dubois, JB, Delozier, T, Griffon, B, Lesec'H, JM, Mustacchi, G, Petruzelka, L, Pribylova, O, Owen, JR, Meier, P, Shan, Y, Shao, YF, Wang, X, Zhao, DB, Howell, A, Swindell, R, Albano, J, de Oliveira, CF, Gervasio, H, Gordilho, J, Ejlertsen, B, Jensen, MB, Mouridsen, H, Gelman, RS, Harris, JR, Hayes, D, Henderson, C, Shapiro, CL, Christiansen, P, Ewertz, M, Mouridsen, HT, Fehm, T, Trampisch, HJ, Dalesio, O, de Vries, EGE, Rodenhuis, S, van Tinteren, H, Comis, RL, Davidson, NE, Gray, R, Robert, N, Sledge, G, Solin, LJ, Sparano, JA, Tormey, DC, Wood, W, Cameron, D, Dixon, JM, Forrest, P, Jack, W, Kunkler, I, Rossbach, J, Klijn, JGM, Treurniet-Donker, AD, van Putten, WLJ, Rotmensz, N, Veronesi, U, Viale, G, Bartelink, H, Bijker, N, Bogaerts, J, Cardoso, F, Cufer, T, Julien, JP, Poortmans, PM, Rutgers, E, van de Velde, CJH, Cunningham, MP, Huovinen, R, Joensuu, H, Costa, A, Bonadonna, G, Gianni, L, Valagussa, P, Goldstein, LJ, Bonneterre, J, Fargeot, P, Fumoleau, P, Kerbrat, P, Lupors, E, Namer, M, Carrasco, E, Segui, MA, Eierman, W, Hilfrich, J, Jonat, W, Kaufmann, M, Kreienberg, R, Schumacher, M, Bastert, G, Rauschecker, H, Sauer, R, Sauerbrei, W, Schauer, A, Blohmer, JU, Costa, SD, Eidtmann, H, Gerber, B, Jackisch, C, Loib, S, von Minckwitz, G, de Schryver, A, Vakaet, L, Belfiglio, M, Nicolucci, A, Pellegrini, F, Pirozzoli, MC, Sacco, M, Valentini, M, McArdle, CS, Smith, DC, Stallard, S, Dent, DM, Gudgeon, CA, Hacking, A, Murray, E, Panieri, E, Werner, ID, De Salvo, GL, Del Bianco, P, Zavagno, G, Leone, B, Vallejo, CT, Zwenger, A, Galligioni, E, Lopez, M, Erazo, A, Medina, JY, Horiguchi, J, Takei, H, Fentiman, IS, Hayward, JL, Rubens, RD, Skilton, D, Scheurlen, H, Sohn, HC, Untch, M, Dafni, U, Markopoulos, C, Bamia, C, Fountzilas, G, Koliou, GA, Manousou, K, Mavroudis, D, Klefstrom, P, Blomqvist, C, Saarto, T, Gallen, M, Canavese, G, Tinterri, C, Margreiter, R, de Lafontan, B, Mihura, J, Roche, H, Asselain, B, Salmon, RJ, Vilcoq, JR, Brain, E, de La Lande, B, Mouret-Fourme, E, Andre, F, Arriagada, R, Delaloge, S, Hill, C, Koscienly, S, Michiels, S, Rubino, C, A'Hern, R, Bliss, J, Ellis, P, Kilburn, L, Yarnold, JR, Benraadt, J, Kooi, M, van de Velde, AO, van Dongen, JA, Vermorken, JB, Castiglione, M, Coates, A, Colleoni, M, Collins, J, Forbes, J, Gelbe, RD, Goldhirsch, A, Lindtner, J, Price, KN, Regan, MM, Rudenstam, CM, Senn, HJ, Thuerlimann, B, Bliss, JM, Chilvers, CED, Coombes, RC, Hall, E, Marty, M, Buyse, M, Possinger, K, Schmid, P, Wallwiener, D, Foster, L, George, WD, Stewart, HJ, Stroner, P, Borovik, R, Hayat, H, Inbar, MJ, Peretz, T, Robinson, E, Camerini, T, Formelli, F, Martelli, G, Di Mauro, MG, Perrone, F, Amadori, D, Martoni, A, Pannuti, F, Camisa, R, Musolino, A, Passalacqua, R, Iwata, H, Shien, T, Ikeda, T, Inokuchi, K, Sawa, K, Sonoo, H, Sadoon, M, Tulusan, AH, Kohno, N, Miyashita, M, Takao, S, Ahn, JH, Jung, KH, Korzeniowski, S, Skolyszewski, J, Ogawa, M, Yamashita, J, Bastiaannet, E, Liefers, GJ, Christiaens, R, Neven, P, Paridaens, R, Van den Bogaert, W, Gazet, JC, Corcoran, N, Deshpande, N, di Martino, L, Douglas, P, Host, H, Lindtner, A, Notter, G, Bryant, AJS, Ewing, GH, Firth, LA, Krushen-Kosloski, JL, Nissen-Meyer, R, Anderson, H, Killander, F, Malmstrom, P, Ryden, L, Arnesson, LG, Carstense, J, Dufmats, M, Fohlin, H, Nordenskjold, B, Soderberg, M, Sundqvist, M, Carpenter, TJ, Murray, N, Royle, GT, Simmonds, PD, Albain, K, Barlow, W, Crowley, J, Gralow, J, Hortobagyi, G, Livingston, R, Martino, S, Osborne, CK, Ravdin, PM, Bergh, J, Bondesso, T, Celebiogl, F, Dahlberg, K, Fornander, T, Fredriksson, I, Frisell, J, Goransson, E, Iiristo, M, Johansson, U, Lenner, E, Lofgren, L, Nikolaidis, P, Perbeck, L, Rotstein, S, Sandelin, K, Skoog, L, Svane, G, af Trampe, E, Wadstrom, C, Janni, W, Maibach, R, Thurlimann, B, Hadji, P, Hozumi, J, Holli, K, Rouhento, K, Safra, T, Brenner, H, Hercbergs, A, Yoshimoto, M, Paterson, AHG, Fyles, A, Meakin, JW, Panzarella, T, Bahi, J, Lemonnier, J, Martin, AL, Reid, M, Spittle, M, Bishop, H, Bundred, NJ, Forbes, JF, Forsyth, S, George, WS, Pinder, SE, Deutsch, GP, Kwong, DLW, Pai, VR, Peto, R, Senanayake, F, Boccardo, F, Rubagotti, A, Baum, M, Hackshaw, A, Houghton, J, Ledermann, J, Monson, K, Tobias, JS, Carlomagno, C, De Laurentiis, M, De Placido, S, Schem, C, Williams, L, Bell, R, Coleman, RE, Dodwell, D, Hinsley, S, Marshall, HC, Pierce, LJ, Basso, SMM, Lumachi, F, Solomayer, E, Horsman, JM, Lester, J, Winter, MC, Buzdar, AU, Hsu, L, Love, RR, Ahlgren, J, Garmo, H, Holmberg, L, Lindman, H, Warnberg, F, Asmar, L, Jones, SE, Aft, R, Gluz, O, Harbeck, N, Liedtke, C, Nitz, U, Litton, A, Wallgren, A, Karlsson, P, Linderholm, BK, Chlebowski, RT, Caffier, H, Brufsky, AM, Llombart, HA

المصدر: The Lancet. Oncology. 19(1):27-39

مصطلحات موضوعية: Medicin och hälsovetenskap

الوصول الحر: http://kipublications.ki.se/Default.aspx?queryparsed=id:137368051Test

المؤلفون: Ovaskainen, O., Abrego, N., Furneaux, B., Hardwick, B., Somervuo, P., Palorinne, I., Andrew, N., Babiy, U., Bao, T., Bazzano, G., Bondarchuk, S., Bonebrake, T., Brennan, G., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E., Chapurlat, E., Creer, S., D’Acqui, L., de Vere, N., Desprez-Loustau, M., Dongmo, M., Dyrholm Jacobsen, I., Fisher, B., Flores de Jesus, M., Gilbert, G., Griffith, G., Gritsuk, A., Gross, A., Grudd, H., Halme, P., Hanna, R., Hansen, J., Hansen, L., Hegbe, A., Hill, S., Hogg, I., Hultman, J., Hyde, K., Hynson, N., Ivanova, N., Karisto, P., Kerdraon, D., Knorre, A., Krisai-Greilhuber, I., Kurhinen, J., Kuzmina, M., Lecomte, N., Lecomte, E., Loaiza, V., Lundin, E., Meire, A., Mešić, A., Miettinen, O., Monkhause, N., Mortimer, P., Müller, J., Nilsson, R., Nonti, P., Nordén, J., Nordén, B., Paz, C., Pellikka, P., Pereira, D., Petch, Geoffrey, Pitkänen, J., Popa, F., Potter, C., Purhonen, J., Pätsi, S., Rafiq, A., Raharinjanahary, D., Rakos, N., Rathnayaka, A., Raundrup, K., Rebriev, Y., Rikkinen, J., Rogers, H., Rogovsky, A., Rozhkov, Y., Runnel, K., Saarto, A., Savchenko, A., Schlegel, M., Schmidt, N., Seibold, S., Skjøth, Carsten, Stengel, E., Sutyrina, S., Syvänperä, I., Tedersoo, L., Timm, J., Tipton, L., Toju, H., Uscka-Perzanowska, M., van der Bank, M., Herman van der Bank, F., Vandenbrink, B., Ventura, S., Vignisson, S., Wang, X., Weisser, W., Wijesinghe, S., Joseph Wright, S., Yang, C., Yorou, N., Young, A., Yu, D., Zakharov, E., Hebert, P., Roslin, T.

الوصف: Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.

وصف الملف: text

العلاقة: https://eprints.worc.ac.uk/13973/1/Binder1.pdfTest; Ovaskainen, O. orcid:0000-0001-9750-4421 , Abrego, N. orcid:0000-0001-6347-6127 , Furneaux, B. orcid:0000-0003-3522-7363 , Hardwick, B., Somervuo, P., Palorinne, I., Andrew, N. orcid:0000-0002-2850-2307 , Babiy, U., Bao, T., Bazzano, G., Bondarchuk, S. orcid:0000-0002-3641-5203 , Bonebrake, T., Brennan, G., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E., Chapurlat, E., Creer, S. orcid:0000-0003-3124-3550 , D’Acqui, L. orcid:0000-0003-2387-2488 , de Vere, N. orcid:0000-0001-9593-6925 , Desprez-Loustau, M., Dongmo, M. orcid:0000-0002-0509-5227 , Dyrholm Jacobsen, I. orcid:0000-0003-2481-8061 , Fisher, B. orcid:0000-0002-4653-3270 , Flores de Jesus, M., Gilbert, G. orcid:0000-0002-5195-9903 , Griffith, G., Gritsuk, A., Gross, A., Grudd, H., Halme, P., Hanna, R., Hansen, J., Hansen, L., Hegbe, A. orcid:0000-0003-0635-3459 , Hill, S., Hogg, I., Hultman, J. orcid:0000-0002-3431-1785 , Hyde, K., Hynson, N. orcid:0000-0001-7098-9641 , Ivanova, N., Karisto, P. orcid:0000-0003-4807-0190 , Kerdraon, D., Knorre, A., Krisai-Greilhuber, I., Kurhinen, J., Kuzmina, M., Lecomte, N., Lecomte, E. orcid:0009-0005-1440-2056 , Loaiza, V., Lundin, E., Meire, A., Mešić, A. orcid:0000-0002-4479-600X , Miettinen, O. orcid:0000-0001-7502-710X , Monkhause, N., Mortimer, P., Müller, J., Nilsson, R. orcid:0000-0002-8052-0107 , Nonti, P., Nordén, J., Nordén, B. orcid:0000-0002-2739-9774 , Paz, C., Pellikka, P., Pereira, D., Petch, Geoffrey, Pitkänen, J., Popa, F., Potter, C., Purhonen, J. orcid:0000-0002-1306-4623 , Pätsi, S., Rafiq, A., Raharinjanahary, D., Rakos, N. orcid:0000-0002-5268-5799 , Rathnayaka, A. orcid:0000-0001-8498-2715 , Raundrup, K., Rebriev, Y. orcid:0000-0001-5156-8593 , Rikkinen, J., Rogers, H., Rogovsky, A., Rozhkov, Y., Runnel, K. orcid:0000-0002-7308-3623 , Saarto, A., Savchenko, A., Schlegel, M., Schmidt, N. orcid:0000-0002-4166-6218 , Seibold, S., Skjøth, Carsten orcid:0000-0001-5992-9568 , Stengel, E., Sutyrina, S., Syvänperä, I., Tedersoo, L. orcid:0000-0002-1635-1249 , Timm, J., Tipton, L. orcid:0000-0002-5118-2671 , Toju, H. orcid:0000-0002-3362-3285 , Uscka-Perzanowska, M., van der Bank, M., Herman van der Bank, F., Vandenbrink, B. orcid:0000-0002-8234-8195 , Ventura, S. orcid:0000-0002-8134-3675 , Vignisson, S., Wang, X., Weisser, W. orcid:0000-0002-2757-8959 , Wijesinghe, S. orcid:0000-0002-5625-9578 , Joseph Wright, S. orcid:0000-0003-4260-5676 , Yang, C., Yorou, N. orcid:0000-0001-6997-811X , Young, A., Yu, D. orcid:0000-0001-8551-5609 , Zakharov, E., Hebert, P. and Roslin, T. orcid:0000-0002-2957-4791 (2024) Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA. Scientific Data, 11 (561). pp. 1-17. ISSN 2052-4463

الإتاحة: https://doi.org/10.1038/s41597-024-03410-0Test
http://eprints.worc.ac.uk/13973Test/
https://eprints.worc.ac.uk/13973/1/Binder1.pdfTest
https://www.nature.com/articles/s41597-024-03410-0Test

المؤلفون: Blomqvist, Carl, Vehmanen, Leena, Kellokumpu-Lehtinen, Pirkko Liisa, Huovinen, Riikka, Ruohola, Johanna, Penttinen, Heidi, Sievänen, Harri, Nikander, Riku, Utriainen, Meri, Saarto, Tiina

المساهمون: Tampere University, Neurological and Sensory diseases, Oncology, Surgical sciences, SYÖT, Oncology

مصطلحات موضوعية: 3122 Cancers, 3126 Surgery, anesthesiology, intensive care, radiology

الوصف: Purpose: We aimed to provide long-term bone mineral density (BMD) data on early breast cancer patients of the BREX (Breast Cancer and Exercise) study. The effects of exercise and adjuvant endocrine treatment 10 years after randomization were analyzed, with special emphasis on aromatase inhibitor (AI) therapy discontinuation at 5 years. Methods: The BREX study randomized 573 pre- and postmenopausal breast cancer patients into a 1-year supervised exercise program or a control group. 372 patients were included into the current follow-up analysis. BMD (g/cm2) was measured by dual-energy X-ray absorptiometry at lumbar spine (LS), left femoral neck (FN), and the total hip. Separate groups were displayed according to baseline menopausal status, and whether the patient had discontinued AI therapy at 5 years or not. Results: The BMD change from 5 to 10 years did not significantly differ between the two randomized arms. AI discontinuation at 5 years had statistically significant BMD effects. The FN BMD continued to decrease in patients who discontinued AI therapy during the first 5-year off-treatment, but the decrease was three-fold less than in patients without AI withdrawal (− 1.4% v. − 3.8%). The LS BMD increased (+ 2.6%) in patients with AI withdrawal during the first 5 years following treatment discontinuation, while a BMD decrease (-1.3%) was seen in patients without AI withdrawal. Conclusion: This study is to our knowledge the first to quantify the long-term impact of AI withdrawal on BMD. Bone loss associated with AI therapy seems partially reversible after stopping treatment. Trial registration: http://www.clinicaltrials.govTest/ (Identifier Number NCT00639210). ; Peer reviewed

وصف الملف: fulltext

العلاقة: Breast Cancer Research and Treatment; https://trepo.tuni.fi/handle/10024/156336Test; URN:NBN:fi:tuni-202404173675

الإتاحة: https://doi.org/10.1007/s10549-024-07252-7Test
https://trepo.tuni.fi/handle/10024/156336Test