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11دورية أكاديمية
المؤلفون: Fuller, Stephen J., Edmunds, Nick S., McGuffin, Liam J, Hardyman, Michelle A., Cull, Joshua J., Alharbi, Hajed O., Meijles, Daniel N., Sugden, Peter H., Clerk, Angela
وصف الملف: text
العلاقة: https://centaur.reading.ac.uk/98442/9/bcj-2021-0003.pdfTest; https://centaur.reading.ac.uk/98442/1/BCJ-2021-0003R1_Merged_PDF-2.pdfTest; Fuller, S. J. , Edmunds, N. S., McGuffin, L. J. orcid:0000-0003-4501-4767 , Hardyman, M. A. , Cull, J. J., Alharbi, H. O., Meijles, D. N., Sugden, P. H. and Clerk, A. orcid:0000-0002-5658-0708 (2021) MAP4K4 expression in cardiomyocytes: multiple isoforms, multiple phosphorylations and interactions with striatins. Biochemical Journal, 478 (11). pp. 2121-2143. ISSN 0264-6021 doi: https://doi.org/10.1042/BCJ20210003Test
الإتاحة: https://doi.org/10.1042/BCJ20210003Test
https://centaur.reading.ac.uk/98442Test/
https://centaur.reading.ac.uk/98442/9/bcj-2021-0003.pdfTest
https://centaur.reading.ac.uk/98442/1/BCJ-2021-0003R1_Merged_PDF-2.pdfTest -
12دورية أكاديمية
المساهمون: Biotechnology and Biological Sciences Research Council, Saudi Arabian Government
المصدر: Nucleic Acids Research ; volume 49, issue W1, page W425-W430 ; ISSN 0305-1048 1362-4962
الإتاحة: https://doi.org/10.1093/nar/gkab321Test
http://academic.oup.com/nar/article-pdf/49/W1/W425/38841751/gkab321.pdfTest -
13دورية أكاديمية
المؤلفون: Adiyaman, Recep, McGuffin, Liam J
المساهمون: Biotechnology and Biological Sciences Research Council
المصدر: Nucleic Acids Research ; volume 49, issue W1, page W589-W596 ; ISSN 0305-1048 1362-4962
مصطلحات موضوعية: Genetics
الإتاحة: https://doi.org/10.1093/nar/gkab300Test
http://academic.oup.com/nar/article-pdf/49/W1/W589/38841989/gkab300.pdfTest -
14كتاب
المؤلفون: Adiyaman, Recep, McGuffin, Liam J.
المساهمون: Filipek, Sławomir
العلاقة: Adiyaman, Recep and McGuffin, Liam J. ORCID logoorcid:0000-0003-4501-4767 (2023) Using local protein model quality estimates to guide a molecular dynamics-based refinement strategy. In: Filipek, Sławomir (ed.) Homology Modeling: Methods and Protocols. Methods in Molecular Biology. Springer Nature, New York, pp. 119-140. ISBN 9781071629734 doi: https://doi.org/10.1007/978-1-0716-2974-1_7Test
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15كتاب
المؤلفون: Alharbi, Shuaa M. A., McGuffin, Liam J.
المساهمون: Kurgan, Lukasz
وصف الملف: text
العلاقة: https://centaur.reading.ac.uk/108791/1/b4730_Ch-06_final_proof.pdfTest; Alharbi, Shuaa M. A. and McGuffin, Liam J. ORCID logoorcid:0000-0003-4501-4767 (2023) Machine learning methods for predicting protein contacts. In: Kurgan, Lukasz (ed.) Machine Learning in Bioinformatics of Protein Sequences: Algorithms, Databases and Resources for Modern Protein Bioinformatics. World Scientific, pp. 155-181. ISBN 9789811258572 doi: https://doi.org/10.1142/9789811258589_0006Test
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16كتاب
المصدر: Methods in Molecular Biology ; Homology Modeling ; page 101-118 ; ISSN 1064-3745 1940-6029 ; ISBN 9781071629734 9781071629741
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17دورية أكاديمية
المؤلفون: Tomkins, James E., Ferrari, R., Vavouraki, N., Hardy, J., Lovering, R. C., Lewis, Patrick A., McGuffin, Liam J., Manzoni, Claudia
وصف الملف: other; text
العلاقة: https://centaur.reading.ac.uk/90595/9/s12964-020-00554-5Test; https://centaur.reading.ac.uk/90595/1/PINOT_CellComSign_28-09_submission_REW_FINAL_NOtracked_Reading.pdfTest; Tomkins, J. E. , Ferrari, R., Vavouraki, N., Hardy, J., Lovering, R. C., Lewis, P. A. , McGuffin, L. J. orcid:0000-0003-4501-4767 and Manzoni, C. (2020) PINOT: an intuitive resource for integrating protein-protein interactions. Cell Communication and Signaling, 18 (92). ISSN 1478-811X doi: https://doi.org/10.1186/s12964-020-00554-5Test
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18دورية أكاديمية
المؤلفون: Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R., Lee, Alexandra J., Kacsoh, Balint Z., Crocker, Alex W., Lewis, Kimberley A., Georghiou, George, Nguyen, Huy N., Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S., Dalkiran, Alperen, Atalay, Rengul Cetin, Zhang, Chengxin, Hurto, Rebecca L., Freddolino, Peter L., Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernandez, Jose M., Gemovic, Branislava, Perovic, Vladimir R., Davidovic, Radoslav S., Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad R. K., Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C., Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A., Antczak, Magdalena, Fabris, Fabio, Wass, Mark N., Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E., Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J., Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W., Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T., Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Vesztrocy, Alex Warwick, Rodriguez, Jose Manuel, Tress, Michael L., Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B., Reeb, Jonas, Ritchie, David W., Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijevic, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico, Falda, Marco, Berselli, Michele, Tosatto, Silvio C. E., Carraro, Marco, Piovesan, Damiano, Rehman, Hafeez Ur, Mao, Qizhong, Zhang, Shanshan, Vucetic, Slobodan, Black, Gage S., Jo, Dane, Suh, Erica, Dayton, Jonathan B., Larsen, Dallas J., Omdahl, Ashton R., McGuffin, Liam J., Brackenridge, Danielle A., Babbitt, Patricia C., Yunes, Jeffrey M., Fontana, Paolo, Zhang, Feng, Zhu, Shanfeng, You, Ronghui, Zhang, Zihan, Dai, Suyang, Yao, Shuwei, Tian, Weidong, Cao, Renzhi, Chandler, Caleb, Amezola, Miguel, Johnson, Devon, Chang, Jia-Ming, Liao, Wen-Hung, Liu, Yi-Wei, Pascarelli, Stefano, Frank, Yotam, Hoehndorf, Robert, Kulmanov, Maxat, Boudellioua, Imane, Politano, Gianfranco, Di Carlo, Stefano, Benso, Alfredo, Hakala, Kai, Ginter, Filip, Mehryary, Farrokh, Kaewphan, Suwisa, Bjorne, Jari, Moen, Hans, Tolvanen, Martti E. E., Salakoski, Tapio, Kihara, Daisuke, Jain, Aashish, Smuc, Tomislav, Altenhoff, Adrian, Ben-Hur, Asa, Rost, Burkhard, Brenner, Steven E., Orengo, Christine A., Jeffery, Constance J., Bosco, Giovanni, Hogan, Deborah A., Martin, Maria J., O'Donovan, Claire, Mooney, Sean D., Greene, Casey S., Radivojac, Predrag, Friedberg, Iddo
المساهمون: Computational genomics, Institute of Biotechnology, Bioinformatics, Genetics, Helsinki Institute of Life Science HiLIFE, Discovery Research Group/Prof. Hannu Toivonen
مصطلحات موضوعية: Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge, CANDIDA-ALBICANS, ONTOLOGY, IDENTIFICATION, GENERATION, LIBRARY, 318 Medical biotechnology
وصف الملف: application/pdf
العلاقة: The work of IF was funded, in part, by the National Science Foundation award DBI-1458359. The work of CSG and AJL was funded, in part, by the National Science Foundation award DBI-1458390 and GBMF 4552 from the Gordon and Betty Moore Foundation. The work of DAH and KAL was funded, in part, by the National Science Foundation award DBI-1458390, National Institutes of Health NIGMS P20 GM113132, and the Cystic Fibrosis Foundation CFRDP STANTO19R0. The work of AP, HY, AR, and MT was funded by BBSRC grants BB/K004131/1, BB/F00964X/1 and BB/M025047/1, Consejo Nacional de Ciencia y Tecnologia Paraguay (CONACyT) grants 14-INV-088 and PINV15-315, and NSF Advances in BioInformatics grant 1660648. The work of JC was partially supported by an NIH grant (R01GM093123) and two NSF grants (DBI 1759934 and IIS1763246). ACM acknowledges the support by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy -EXC 2155 "RESIST" - Project ID 39087428. DK acknowledges the support from the National Institutes of Health (R01GM123055) and the National Science Foundation (DMS1614777, CMMI1825941). PB acknowledges the support from the National Institutes of Health (R01GM60595). GB and BZK acknowledge the support from the National Science Foundation (NSF 1458390) and NIH DP1MH110234. FS was funded by the ERC StG 757700 "HYPER-INSIGHT" and by the Spanish Ministry of Science, Innovation and Universities grant BFU2017-89833-P. FS further acknowledges the funding from the Severo Ochoa award to the IRB Barcelona. TS was funded by the Centre of Excellence project "BioProspecting of Adriatic Sea", co-financed by the Croatian Government and the European Regional Development Fund (KK.01.1.1.01.0002). The work of SK was funded by ATT Tieto kayttoon grant and Academy of Finland. JB and HM acknowledge the support of the University of Turku, the Academy of Finland and CSC -IT Center for Science Ltd. TB and SM were funded by the NIH awards UL1 TR002319 and U24 TR002306. The work of CZ and ZW was funded by the National Institutes of Health R15GM120650 to ZW and start-up funding from the University of Miami to ZW. The work of PWR was supported by the National Cancer Institute of the National Institutes of Health under Award Number U01CA198942. PR acknowledges NSF grant DBI-1458477. PT acknowledges the support from Helsinki Institute for Life Sciences. The work of AJM was funded by the Academy of Finland (No. 292589). The work of FZ and WT was funded by the National Natural Science Foundation of China (31671367, 31471245, 91631301) and the National Key Research and Development Program of China (2016YFC1000505, 2017YFC0908402]. CS acknowledges the support by the Italian Ministry of Education, University and Research (MIUR) PRIN 2017 project 2017483NH8. SZ is supported by the National Natural Science Foundation of China (No. 61872094 and No. 61572139) and Shanghai Municipal Science and Technology Major Project (No. 2017SHZDZX01). PLF and RLH were supported by the National Institutes of Health NIH R35-GM128637 and R00-GM097033. JG, DTJ, CW, DC, and RF were supported by the UK Biotechnology and Biological Sciences Research Council (BB/N019431/1, BB/L020505/1, and BB/L002817/1) and Elsevier. The work of YZ and CZ was funded in part by the National Institutes of Health award GM083107, GM116960, and AI134678; the National Science Foundation award DBI1564756; and the Extreme Science and Engineering Discovery Environment (XSEDE) award MCB160101 and MCB160124.; Zhou , N , Jiang , Y , Bergquist , T R , Lee , A J , Kacsoh , B Z , Crocker , A W , Lewis , K A , Georghiou , G , Nguyen , H N , Hamid , M N , Davis , L , Dogan , T , Atalay , V , Rifaioglu , A S , Dalkiran , A , Atalay , R C , Zhang , C , Hurto , R L , Freddolino , P L , Zhang , Y , Bhat , P , Supek , F , Fernandez , J M , Gemovic , B , Perovic , V R , Davidovic , R S , Sumonja , N , Veljkovic , N , Asgari , E , Mofrad , M R K , Profiti , G , Savojardo , C , Martelli , P L , Casadio , R , Boecker , F , Schoof , H , Kahanda , I , Thurlby , N , McHardy , A C , Renaux , A , Saidi , R , Gough , J , Freitas , A A , Antczak , M , Fabris , F , Wass , M N , Hou , J , Cheng , J , Wang , Z , Romero , A E , Paccanaro , A , Yang , H , Goldberg , T , Zhao , C , Holm , L , Törönen , P , Medlar , A J , Zosa , E , Borukhov , I , Novikov , I , Wilkins , A , Lichtarge , O , Chi , P-H , Tseng , W-C , Linial , M , Rose , P W , Dessimoz , C , Vidulin , V , Dzeroski , S , Sillitoe , I , Das , S , Lees , J G , Jones , D T , Wan , C , Cozzetto , D , Fa , R , Torres , M , Vesztrocy , A W , Rodriguez , J M , Tress , M L , Frasca , M , Notaro , M , Grossi , G , Petrini , A , Re , M , Valentini , G , Mesiti , M , Roche , D B , Reeb , J , Ritchie , D W , Aridhi , S , Alborzi , S Z , Devignes , M-D , Koo , D C E , Bonneau , R , Gligorijevic , V , Barot , M , Fang , H , Toppo , S , Lavezzo , E , Falda , M , Berselli , M , Tosatto , S C E , Carraro , M , Piovesan , D , Rehman , H U , Mao , Q , Zhang , S , Vucetic , S , Black , G S , Jo , D , Suh , E , Dayton , J B , Larsen , D J , Omdahl , A R , McGuffin , L J , Brackenridge , D A , Babbitt , P C , Yunes , J M , Fontana , P , Zhang , F , Zhu , S , You , R , Zhang , Z , Dai , S , Yao , S , Tian , W , Cao , R , Chandler , C , Amezola , M , Johnson , D , Chang , J-M , Liao , W-H , Liu , Y-W , Pascarelli , S , Frank , Y , Hoehndorf , R , Kulmanov , M , Boudellioua , I , Politano , G , Di Carlo , S , Benso , A , Hakala , K , Ginter , F , Mehryary , F , Kaewphan , S , Bjorne , J , Moen , H , Tolvanen , M E E , Salakoski , T , Kihara , D , Jain , A , Smuc , T , Altenhoff , A , Ben-Hur , A , Rost , B , Brenner , S E , Orengo , C A , Jeffery , C J , Bosco , G , Hogan , D A , Martin , M J , O'Donovan , C , Mooney , S D , Greene , C S , Radivojac , P & Friedberg , I 2019 , ' The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens ' , Genome Biology , vol. 20 , no. 1 , 244 . https://doi.org/10.1186/s13059-019-1835-8Test; ORCID: /0000-0003-2482-0663/work/68617657; bbcc4816-628a-4e90-8797-a902971e0328; http://hdl.handle.net/10138/309448Test; 000498615000001
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19دورية أكاديمية
المؤلفون: Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R, Lee, Alexandra J, Kacsoh, Balint Z, Crocker, Alex W, Lewis, Kimberley A, Georghiou, George, Nguyen, Huy N, Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S, Dalkıran, Alperen, Cetin Atalay, Rengul, Zhang, Chengxin, Hurto, Rebecca L, Freddolino, Peter L, Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernández, José M, Gemović, Branislava S., Perović, Vladimir R., Davidović, Radoslav S., Šumonja, Neven, Veljković, Nevena V., Asgari, Ehsaneddin, Mofrad, Mohammad R.K., Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C, Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A, Antczak, Magdalena, Fabris, Fabio, Wass, Mark N, Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E, Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J, Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W, Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T, Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Warwick Vesztrocy, Alex, Rodriguez, Jose Manuel, Tress, Michael L, Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B, Reeb, Jonas, Ritchie, David W, Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijević, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico, Falda, Marco, Berselli, Michele, Tosatto, Silvio C.E., Carraro, Marco, Piovesan, Damiano, Ur Rehman, Hafeez, Mao, Qizhong, Zhang, Shanshan, Vucetic, Slobodan, Black, Gage S, Jo, Dane, Suh, Erica, Dayton, Jonathan B, Larsen, Dallas J, Omdahl, Ashton R, McGuffin, Liam J, Brackenridge, Danielle A, Babbitt, Patricia C, Yunes, Jeffrey M, Fontana, Paolo, Zhang, Feng, Zhu, Shanfeng, You, Ronghui, Zhang, Zihan, Dai, Suyang, Yao, Shuwei, Tian, Weidong, Cao, Renzhi, Chandler, Caleb, Amezola, Miguel, Johnson, Devon, Chang, Jia-Ming, Liao, Wen-Hung, Liu, Yi-Wei, Pascarelli, Stefano, Frank, Yotam, Hoehndorf, Robert, Kulmanov, Maxat, Boudellioua, Imane, Politano, Gianfranco, Di Carlo, Stefano, Benso, Alfredo, Hakala, Kai, Ginter, Filip, Mehryary, Farrokh, Kaewphan, Suwisa, Björne, Jari, Moen, Hans, Tolvanen, Martti E.E., Salakoski, Tapio, Kihara, Daisuke, Jain, Aashish, Šmuc, Tomislav, Altenhoff, Adrian, Ben-Hur, Asa, Rost, Burkhard, Brenner, Steven E, Orengo, Christine A, Jeffery, Constance J, Bosco, Giovanni, Hogan, Deborah A, Martin, Maria J, O’Donovan, Claire, Mooney, Sean D, Greene, Casey S, Radivojac, Predrag, Friedberg, Iddo
المصدر: Genome Biology
مصطلحات موضوعية: Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge
العلاقة: info:eu-repo/grantAgreement/MESTD/Basic Research (BR or ON)/173001/RS//; https://vinar.vin.bg.ac.rs/handle/123456789/8655Test; 000498615000001; 2-s2.0-85075272104
الإتاحة: https://doi.org/10.1186/s13059-019-1835-8Test
https://vinar.vin.bg.ac.rs/handle/123456789/8655Test -
20دورية أكاديمية
المؤلفون: El Sarraf, Nadia, Gurel, Filiz, Tufan, Feyza, McGuffin, Liam J.
وصف الملف: text
العلاقة: https://centaur.reading.ac.uk/84268/9/journal.pone.0218120.pdfTest; El Sarraf, N., Gurel, F., Tufan, F. and McGuffin, L. J. orcid:0000-0003-4501-4767 (2019) Characterisation of HvVIP1 and expression profile analysis of stress response regulators in barley under Agrobacterium and Fusarium infections. PLoS ONE, 14 (6). ISSN 1932-6203 doi: https://doi.org/10.1371/journal.pone.0218120Test