المؤلفون: Thomas J. Ha, Peter G. Y. Zhang, Remi Robert, Joanna Yeung, Douglas J. Swanson, Anthony Mathelier, Wyeth W. Wasserman, Sujin Im, Masayoshi Itoh, Hideya Kawaji, Timo Lassmann, Carsten O. Daub, Erik Arner, The FANTOM Consortium, Piero Carninci, Yoshihide Hayashizaki, Alistair R. R. Forrest, Daniel Goldowitz

المصدر: BMC Genomics, Vol 20, Iss 1, Pp 1-17 (2019)

مصطلحات موضوعية: Cerebellar development, Transcriptome, HeliScopeCAGE, Motif activity, Transfactivity, Transcription factors, Biotechnology, TP248.13-248.65, Genetics, QH426-470

وصف الملف: electronic resource

العلاقة: http://link.springer.com/article/10.1186/s12864-019-6063-9Test; https://doaj.org/toc/1471-2164Test

الوصول الحر: https://doaj.org/article/26886484d3af4071954fe82631526e36Test

المؤلفون: Hideya Kawaji, Imad Abugessaisa, Takeya Kasukawa, Luigi Marchionni, Jessica Severin, Martin S. Taylor, Shohei Noma, Erik Arner, Robin Andersson, Yoshihide Hayashizaki, Akira Hasegawa, Tanvir Alam, Levon M. Khachigian, Hiroshi Tarui, Michiel J. L. de Hoon, Saumya Agrawal, Piero Carninci, Yuri Ishizu, Robert Young, Guojun Sheng, Timo Lassmann, Masayoshi Itoh, Marina Lizio, Jordan A. Ramilowski, Alistair R. R. Forrest

المصدر: Alam, T, Agrawal, S, Severin, J, Young, R, Andersson, R, Amer, E, Hasegawa, A, Lizio, M, Ramilowski, J, Abugessaisa, I, Ishizu, Y, Noma, S, Tarui, H, Taylor, M S, Lassmann, T, Itoh, M, Kasukawa, T, Kawaji, H, Marchionni, L, Sheng, G, Forrest, A R R, Khachigian, L M, Hayashizaki, Y, Carninci, P & De Hoon, M 2020, ' Comparative transcriptomics of primary cells in vertebrates ', Genome Research . https://doi.org/10.1101/gr.255679.119Test
Genome Res
Alam, T, Agrawal, S, Severin, J, Young, R S, Andersson, R, Arner, E, Hasegawa, A, Lizio, M, Ramilowski, J A, Abugessaisa, I, Ishizu, Y, Noma, S, Tarui, H, Taylor, M S, Lassmann, T, Itoh, M, Kasukawa, T, Kawaji, H, Marchionni, L, Sheng, G, Forrest, A R R, Khachigian, L M, Hayashizaki, Y, Carninci, P & de Hoon, M J L 2020, ' Comparative transcriptomics of primary cells in vertebrates ', Genome Research, vol. 30, no. 7, pp. 951-961 . https://doi.org/10.1101/gr.255679.119Test

مصطلحات موضوعية: Biology, Evolution, Molecular, Transcriptome, Mice, 03 medical and health sciences, Dogs, 0302 clinical medicine, Species Specificity, Gene expression, Genetics, Transcriptional regulation, Animals, Humans, Gene Regulatory Networks, Nucleotide Motifs, Promoter Regions, Genetic, Enhancer, Gene, Genetics (clinical), 030304 developmental biology, Principal Component Analysis, 0303 health sciences, Research, Gene Expression Profiling, Promoter, Phenotype, Rats, Gene expression profiling, MicroRNAs, Chickens, 030217 neurology & neurosurgery, Transcription Factors

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d2c32856adbd66803d245356bf082704Test
https://doi.org/10.1101/gr.255679.119Test

المؤلفون: Marina eLizio, Yuri eIshizu, Masayoshi eItoh, Timo eLassmann, Akira eHasegawa, Atsutaka eKubosaki, Jessica eSeverin, Hideya eKawaji, Yukio eNakamura, Harukazu eSuzuki, Yoshihide eHayashizaki, Piero eCarninci, Alistair R R Forrest

المصدر: Frontiers in Genetics, Vol 6 (2015)

مصطلحات موضوعية: Insulin, Systems Biology, Transcription Factors, Network analysis, ChIP-seq, Genetics, QH426-470

العلاقة: http://journal.frontiersin.org/Journal/10.3389/fgene.2015.00331/fullTest; https://doaj.org/toc/1664-8021Test; https://doaj.org/article/63945fc900e549e39c81f344f79f6344Test

الإتاحة: https://doi.org/10.3389/fgene.2015.00331Test
https://doaj.org/article/63945fc900e549e39c81f344f79f6344Test

المؤلفون: Remi Robert, Dan Goldowitz, Hideya Kawaji, Wyeth W. Wasserman, Peter G. Zhang, Erik Arner, Yoshihide Hayashizaki, Carsten O. Daub, Sujin Im, Timo Lassmann, Thomas J. Ha, Alistair R. R. Forrest, Anthony Mathelier, Joanna Yeung, Masayoshi Itoh, Douglas J. Swanson, Piero Carninci

المصدر: BMC Genomics
BMC Genomics, Vol 20, Iss 1, Pp 1-17 (2019)

مصطلحات موضوعية: Cerebellum, lcsh:QH426-470, HeliScopeCAGE, Transcription, Genetic, lcsh:Biotechnology, Gene regulatory network, Motif activity, Regulatory Factor X Transcription Factors, Computational biology, Biology, Transcriptome, 03 medical and health sciences, Mice, 0302 clinical medicine, lcsh:TP248.13-248.65, Genetics, medicine, Transcription factors, Animals, Atf4, Nucleotide Motifs, Promoter Regions, Genetic, Transcription factor, 030304 developmental biology, Rfx3, 0303 health sciences, Gene knockdown, Transfactivity, Gene Expression Profiling, Gene Expression Regulation, Developmental, Promoter, Cerebellar development, Activating Transcription Factor 4, Cap analysis gene expression, Mice, Inbred C57BL, lcsh:Genetics, medicine.anatomical_structure, RNAi, Gene Knockdown Techniques, Scrt2, RFX3, 030217 neurology & neurosurgery, Biotechnology, Research Article

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c21f23bc0f3a633e83b679ca39eb21c0Test
http://europepmc.org/articles/PMC6751898Test

المؤلفون: Philipp Kapranov, Erik Arner, Timo Lassmann, Maxim Ri, Yoshihide Hayashizaki, Claes Wahlestedt, Masayoshi Itoh, Olga V. Saik, Piero Carninci, Denis V. Antonets, Yuri Vyatkin, Yao Qi, Georges St. Laurent, Timothy A. McCaffrey, Michiel J. L. de Hoon, Hideya Kawaji, Dmitry Shtokalo, Alistair R. R. Forrest, Estelle Nicolas

المصدر: Nucleic Acids Research

مصطلحات موضوعية: 0301 basic medicine, Systems biology, Embryonic Development, Genomics, Computational biology, Biology, Genome, 03 medical and health sciences, Genetics, Humans, Promoter Regions, Genetic, Gene, Cell Nucleus, Systems Biology, Terminal Repeat Sequences, RNA, Molecular Sequence Annotation, Long non-coding RNA, Forward genetics, Retroviridae, 030104 developmental biology, Gene Expression Regulation, Insulator Elements, RNA, Long Noncoding, Human genome, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1abf29dd66ae1e09813eff4e352b7a95Test
https://doi.org/10.1093/nar/gkw162Test

المؤلفون: Matt E. Oates, Harukazu Suzuki, Christian M. Nefzger, Owen J. L. Rackham, Jose M. Polo, Alistair R. R. Forrest, Carsten O. Daub, Enrico Petretto, Yoshihide Hayashizaki, Jaber Firas, Jay W. Shin, Hai Fang, Julian Gough, Anja S Knaupp, Melissa L. Holmes

المصدر: Rackham, O J L, Firas, J, Fang, H, Oates, M E, Holmes, M L, Knaupp, A S, Suzuki, H, Nefzger, C M, Daub, C O, Shin, J W, Petretto, E, Forrest, A R R, Hayashizaki, Y & Polo, J M & Gough, J 2016, ' A predictive computational framework for direct reprogramming between human cell types ', Nature Genetics, vol. 48, no. 3, pp. 331-335 . https://doi.org/10.1038/ng.3487Test

مصطلحات موضوعية: 0301 basic medicine, Cell type, Induced Pluripotent Stem Cells, Cell, Computational biology, Biology, Regenerative Medicine, Bioinformatics, Regenerative medicine, 03 medical and health sciences, Genetics, medicine, Humans, Gene Regulatory Networks, Tissue engineering, Transcription factor, Regulation of gene expression, System analysis, Transdifferentiation, Cell Differentiation, Fibroblasts, Human cell, Cellular Reprogramming, Gene regulation, 030104 developmental biology, medicine.anatomical_structure, Cell Transdifferentiation, Reprogramming, Transcription Factors

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a441d839ee3859233a23cecc47bc9649Test
https://doi.org/10.1038/ng.3487Test

المؤلفون: Carsten O. Daub, Dan Goldowitz, Douglas J. Swanson, Peter G. Zhang, Hideya Kawaji, Alistair R. R. Forrest, Ishita Gupta, Thomas J. Ha, Piero Carninci, Joanna Yeung, Michiel J. L. de Hoon, Timo Lassmann, Sayaka Nagao-Sato, Masayoshi Itoh, Yoshihide Hayashizaki, Miguel Ramirez, Erik Arner

المصدر: Cerebellum (London, England). 17(3)

مصطلحات موضوعية: 0301 basic medicine, Cerebellum, Computational biology, In situ hybridization, Laser Capture Microdissection, Biology, Real-Time Polymerase Chain Reaction, Transcriptome, 03 medical and health sciences, medicine, Animals, Computer Simulation, Gene, Transcription factor, Microdissection, In Situ Hybridization, Laser capture microdissection, Neurons, Gene Expression Profiling, Gene Expression Regulation, Developmental, Granule cell, Mice, Inbred C57BL, 030104 developmental biology, medicine.anatomical_structure, Neurology, Neurology (clinical), Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a77b6e3826db588e82ee77c8b3a2f161Test
https://pubmed.ncbi.nlm.nih.gov/29307116Test

المؤلفون: Christine L. Mummery, Hiroshi Kawamoto, Mitsuru Morimoto, Hiroki Sato, Misako Yoneda, Kim M. Summers, Haruhiko Koseki, Carsten O. Daub, Imad Abugessaisa, Olga Hrydziuszko, Akira Hasegawa, Afsaneh Eslami, J Kenneth Baillie, Dan Goldowitz, Frank Brombacher, Piero Carninci, Thomas J. Ha, Tomokatsu Ikawa, Peter G. Zhang, Andru Tomoiu, Erik Arner, Robin Andersson, Soichi Kojima, Margaret Patrikakis, Andreas Lennartsson, Christine A. Wells, Valerio Orlando, Miki Kojima, Lesley M. Forrester, Peter Arner, Marina Lizio, Christopher J. Mungall, Geoffrey J. Faulkner, Berit Lilje, David A. Hume, Takeya Kasukawa, Hideya Kawaji, Louise N. Winteringham, Soichi Ogishima, Kristoffer Vitting-Seerup, Jayson Harshbarger, Michael Detmar, Anita Schwegmann, Yasushi Okazaki, Rolf Swoboda, Alka Saxena, Jun Kawai, Hiromi Nishiyori-Sueki, Mitsuko Hara, Yoshihide Hayashizaki, Ernst J. Wolvetang, Chieko Kai, Naoto Kondo, Richard A Axton, Albin Sandelin, James Briggs, Yutaka Nakachi, Dmitry A. Ovchinnikov, Carmelo Ferrai, Mitsuyoshi Murata, Masayoshi Itoh, Finn Drabløs, Anthony G Beckhouse, Lynsey Fairbairn, Meenhard Herlyn, Mariko Okada-Hatakeyama, Beatrice Bodega, Susan E. Zabierowski, Morana Vitezic, Michiel J. L. de Hoon, Masaaki Furuno, Ana Pombo, Reto Guler, Hiroshi Tanaka, Alistair R. R. Forrest, Serkan Sahin, Timo Lassmann, Robert Passier, S. Peter Klinken, Tom C. Freeman, Alexander D. Diehl, Niklas Mejhert, Anna Ehrlund, Ken Miyaguchi, Michela Fagiolini, Nicolas Bertin, Michelle Rönnerblad, Sayaka Nagao-Sato, Levon M. Khachigian, Mitsuhiro Endoh, Margaret B. Davis, Shiro Fukuda, Daisuke Sugiyama, Xian-Yang Qin, Malcolm E. Fisher, Yosuke Mizuno, Jessica Severin, Sarah Klein, Suzana Savvi, Kelly J. Morris, Terrence F. Meehan, Yuri Ishizu, Fumi Hori, Ahmad M. N. Alhendi, Sachi Ishikawa-Kato, Tsugumi Kawashima, Harukazu Suzuki, Sugata Roy, Chiyo Yanagi-Mizuochi

المصدر: Science, 347(6225), 1010-1014. American Association for the Advancement of Science

مصطلحات موضوعية: Transcription, Genetic, Cellular differentiation, Enhancer RNAs, Biology, Article, Mice, Dogs, Transcription (biology), Animals, RNA, Messenger, Enhancer, Gene, Transcription factor, Genetics, Regulation of gene expression, Multidisciplinary, Binding Sites, Stem Cells, Gene Expression Regulation, Developmental, Promoter, Cell Differentiation, Cell biology, Rats, Enhancer Elements, Genetic, Cattle, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c3d2bcd692a9ce63f7ea1e9d11c1f4c6Test
http://www.scopus.com/inward/record.url?scp=84923796255&partnerID=8YFLogxKTest

المؤلفون: David J. Arenillas, Wyeth W. Wasserman, Alistair R. R. Forrest, Timo Lassmann, Anthony Mathelier, Hideya Kawaji

المصدر: Bioinformatics

مصطلحات موضوعية: 0301 basic medicine, Statistics and Probability, Gene Expression, Computational biology, Regulatory Sequences, Nucleic Acid, Biology, Bioinformatics, Biochemistry, 03 medical and health sciences, Opossum, Mammalian cell, Transcriptional regulation, Humans, Nucleotide Motifs, Molecular Biology, Gene, computer.programming_language, Binding Sites, Computational Biology, High-Throughput Nucleotide Sequencing, Fantom, biology.organism_classification, Applications Notes, Cap analysis gene expression, Computer Science Applications, DNA binding site, Computational Mathematics, 030104 developmental biology, Computational Theory and Mathematics, Motif (music), Transcription Initiation Site, Perl, computer, Software, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::63baa4b60b4451500ac1ecc8df29f911Test
https://doi.org/10.1093/bioinformatics/btw337Test

المؤلفون: Masanori Suzuki, Jay W. Shin, Yoshihide Hayashizaki, Takahiro Suzuki, Yasuhiro Tomaru, Atsutaka Kubosaki, Ryota Hasegawa, Hideya Kawaji, Harukazu Suzuki, Alistair R. R. Forrest, Taiji Sato

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Adult, Gene knockdown, Cell type, Gene regulation, Chromatin and Epigenetics, Infant, Newborn, Gene regulatory network, Fibroblasts, Biology, Molecular biology, Cell biology, Transcriptome, RNA interference, Cell Transdifferentiation, Adipocytes, Genetics, Humans, Gene Regulatory Networks, RNA Interference, Reprogramming, Transcription factor, Cells, Cultured, Tissue homeostasis, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d60c0dc09f36799209a0253d34e0a475Test
https://doi.org/10.1093/nar/gku567Test