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المؤلفون: Ludwig Geistlinger, Nitesh Turaga, Gergely Csaba, Sean Davis, Ralf Zimmer, Lucas Schiffer, Marcel Ramos, Mara Santarelli, Levi Waldron, Martin Morgan, Charity W. Law, Vincent J. Carey
المصدر: Briefings in Bioinformatics
مصطلحات موضوعية: AcademicSubjects/SCI01060, Computer science, Computational biology, Ranking (information retrieval), Bioconductor, Set (abstract data type), 03 medical and health sciences, 0302 clinical medicine, gene expression data, Databases, Genetic, gene set analysis, Animals, Humans, Relevance (information retrieval), RNA-Seq, KEGG, Molecular Biology, 030304 developmental biology, 0303 health sciences, Microarray analysis techniques, Gene Expression Profiling, Genomics, Benchmarking, Compendium, pathway analysis, Problem Solving Protocol, microarray, Software, 030217 neurology & neurosurgery, Information Systems
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::669d1a84821e31d770d97b7d23b25af3Test
https://doi.org/10.1093/bib/bbz158Test -
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المؤلفون: Markus Gruber, Constantin Ammar, Gergely Csaba, Ralf Zimmer
المصدر: Mol Cell Proteomics
مصطلحات موضوعية: Proteomics, Databases, Factual, Proteome, Fold (higher-order function), Quantitative proteomics, Peptide, Computational biology, Signal-To-Noise Ratio, Biochemistry, Mass Spectrometry, Analytical Chemistry, Fungal Proteins, 03 medical and health sciences, Alzheimer Disease, Humans, Cutoff, Francisella, Molecular Biology, Plant Proteins, 030304 developmental biology, chemistry.chemical_classification, 0303 health sciences, Chemistry, Noise (signal processing), 030302 biochemistry & molecular biology, Technological Innovation and Resources, Reproducibility of Results, Parkinson Disease, Fold change, Data set, Benchmarking, Label-free quantification, Peptides, Software, HeLa Cells
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b699880cb0e454cd107f7c46ac4c2d98Test
https://doi.org/10.1074/mcp.ra119.001509Test -
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المؤلفون: Robert Küffner, Ludwig Geistlinger, Ralf Zimmer, Stefan Altmann, Tobias Petri
المصدر: Bioinformatics 31, 2836-2843 (2015)
مصطلحات موضوعية: Statistics and Probability, False discovery rate, Saccharomyces cerevisiae Proteins, Computer science, Gene regulatory network, Inference, Machine learning, computer.software_genre, Biochemistry, Machine Learning, Gene Expression Regulation, Fungal, False Positive Reactions, Gene Regulatory Networks, Spurious relationship, Molecular Biology, Oligonucleotide Array Sequence Analysis, business.industry, Gene Expression Profiling, Systems Biology, Expression (mathematics), Computer Science Applications, Computational Mathematics, Computational Theory and Mathematics, Data mining, Artificial intelligence, business, computer, Algorithms, Software, Signal Transduction
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8965f636fd559ac5c9468e9465f2cecbTest
https://doi.org/10.1093/bioinformatics/btv215Test -
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المؤلفون: Daniel, Marbach, Costello, James C., Robert, Küffner, Vega, Nicole M., Prill, Robert J., Camacho, Diogo M., Allison, Kyle R., Andrej, Aderhold, Richard, Bonneau, Yukun, Chen, Collins, James J., Francesca, Cordero, Martin, Crane, Frank, Dondelinger, Mathias, Drton, Roberto, Esposito, Rina, Foygel, Alberto de la Fuente, Jan, Gertheiss, Pierre, Geurts, Alex, Greenfield, Marco, Grzegorczyk, Anne Claire Haury, Benjamin, Holmes, Torsten, Hothorn, Dirk, Husmeier, Vân Anh Huynh Thu, Alexandre, Irrthum, Manolis, Kellis, Guy, Karlebach, Sophie, Lèbre, Vincenzo De Leo, Aviv, Madar, Subramani, Mani, Fantine, Mordelet, Harry, Ostrer, Zhengyu, Ouyang, Ravi, Pandya, Tobias, Petri, Andrea, Pinna, Poultney, Christopher S., Serena, Rezny, Ruskin, Heather J., Yvan, Saeys, Ron, Shamir, Sirbu, Alina, Mingzhou, Song, Nicola, Soranzo, Alexander, Statnikov, Gustavo, Stolovitzky, Nicci, Vega, Paola Vera Licona, Jean Philippe Vert, Alessia, Visconti, Haizhou, Wang, Louis, Wehenkel, Lukas, Windhager, Yang, Zhang, Ralf, Zimmer
المساهمون: Daniel Marbach, James C Costello, Robert Küffner, Nicole M Vega, Robert J Prill, Diogo M Camacho, Kyle R Allison, Andrej Aderhold, Richard Bonneau, Yukun Chen, James J Collin, Francesca Cordero, Martin Crane, Frank Dondelinger, Mathias Drton, Roberto Esposito, Rina Foygel, Alberto de la Fuente, Jan Gerthei, Pierre Geurt, Alex Greenfield, Marco Grzegorczyk, Anne-Claire Haury, Benjamin Holme, Torsten Hothorn, Dirk Husmeier, Vân Anh Huynh-Thu, Alexandre Irrthum, Manolis Kelli, Guy Karlebach, Sophie Lèbre, Vincenzo De Leo, Aviv Madar, Subramani Mani, Fantine Mordelet, Harry Ostrer, Zhengyu Ouyang, Ravi Pandya, Tobias Petri, Andrea Pinna, Christopher S Poultney, Serena Rezny, Heather J Ruskin, Yvan Saey, Ron Shamir, Alina Sîrbu, Mingzhou Song, Nicola Soranzo, Alexander Statnikov, Gustavo Stolovitzky, Nicci Vega, Paola Vera-Licona, Jean-Philippe Vert, Alessia Visconti, Haizhou Wang, Louis Wehenkel, Lukas Windhager, Yang Zhang, Ralf Zimmer
المصدر: Nature methods
مصطلحات موضوعية: SELECTION, Bayes theorem, genetic association, Transcription, Genetic, principal component analysis, algorithm, article, bacterial metabolism, biofilm, bootstrapping, computer model, controlled study, Escherichia coli, gene control, gene expression, gene interaction, gene regulatory network, genetic transcription, genetic variability, microarray analysis, microbial community, Monte Carlo method, nonhuman, priority journal, Saccharomyces cerevisiae, Staphylococcus aureus Species Index: Escherichia coli, Staphylococcus aureus, Gene regulatory network, Inference, integration, computer.software_genre, Biochemistry, Bayes' theorem, 0302 clinical medicine, Oligonucleotide Array Sequence Analysis, Genetics, 0303 health sciences, TRANSCRIPTIONAL REGULATORY NETWORK, ESCHERICHIA-COLI, Algorithms, Biotechnology, Reverse engineering, EXPRESSION DATA, Systems biology, In silico, Biology, Machine learning, Article, gene regulatory networks, reverse engineering, 03 medical and health sciences, Gene interaction, Molecular Biology, 030304 developmental biology, Bootstrapping, business.industry, Computational Biology, Gene Expression Regulation, Bacterial, Cell Biology, Artificial intelligence, business, computer, Software, 030217 neurology & neurosurgery
وصف الملف: ELETTRONICO
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::01bd67cd43235cc06f92f7fb3635f0f5Test
https://doi.org/10.1038/nmeth.2016Test -
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المؤلفون: Gergely Csaba, Ralf Zimmer, Evi Berchtold
المصدر: Bioinformatics (Oxford, England). 33(12)
مصطلحات موضوعية: 0301 basic medicine, Statistics and Probability, Current (mathematics), Computer science, Process (engineering), Breast Neoplasms, Computational biology, Biochemistry, Set (abstract data type), 03 medical and health sciences, Consistency (database systems), Humans, Differential (infinitesimal), Molecular Biology, Gene, Biological Phenomena, Computational Biology, Molecular Sequence Annotation, Biological process, Computer Science Applications, Computational Mathematics, 030104 developmental biology, Computational Theory and Mathematics, Enhanced Data Rates for GSM Evolution, Algorithms, Metabolic Networks and Pathways, Software
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ba889e665cc6e49ec1cd60f22074a009Test
https://pubmed.ncbi.nlm.nih.gov/28165113Test -
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المؤلفون: Robert Pesch, Ralf Zimmer
المصدر: BMC Systems Biology
مصطلحات موضوعية: 0301 basic medicine, Computer science, Systems biology, Big data, ENCODE, Mice, 03 medical and health sciences, 0302 clinical medicine, Species Specificity, Biomedical data, Structural Biology, Modelling and Simulation, Animals, Humans, Web application, Gene Regulatory Networks, Gene regulatory networks (GRN), Molecular Biology, Cross-species transfer, International research, business.industry, Applied Mathematics, Cytoscape, Computational Biology, Data science, Computer Science Applications, Metadata, 030104 developmental biology, Modeling and Simulation, Context specific, Tumor Suppressor Protein p53, K562 Cells, business, Software, 030217 neurology & neurosurgery
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9322666fdb833a3f89d478950fb45618Test
https://doi.org/10.1186/s12918-016-0304-1Test -
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المؤلفون: Ludwig Geistlinger, Gergely Csaba, Ralf Zimmer
المصدر: BMC Bioinformatics
مصطلحات موضوعية: 0301 basic medicine, Databases, Factual, Pathway analysis, Gene set enrichment, Gene regulatory network, Biology, computer.software_genre, Biochemistry, Bioconductor, 03 medical and health sciences, Differential expression, Structural Biology, Gene Regulatory Networks, Set (psychology), Molecular Biology, Sequence Analysis, RNA, Microarray analysis techniques, End user, Gene Expression Profiling, Applied Mathematics, Gene network enrichment, Microarray Analysis, Computer Science Applications, Gene expression profiling, 030104 developmental biology, Gene expression, Data mining, DNA microarray, computer, Software
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c923e845ff179fffb939f989028b70cfTest
https://doi.org/10.1186/s12859-016-0884-1Test -
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المصدر: Bioinformatics
مصطلحات موضوعية: Statistics and Probability, Gene Regulation and Transcriptomics, Neoplasms, Nerve Tissue, Gene regulatory network, Computational biology, Biology, Biochemistry, Gene expression, Humans, Ismb/Eccb 2011 Proceedings Papers Committee July 17 to July 19, 2011, Vienna, Austria, Gene Regulatory Networks, Molecular Biology, Gene, Transcription factor, Regulation of gene expression, Genetics, Gene Expression Profiling, Proteins, Original Papers, Graph, Computer Science Applications, Gene expression profiling, Gene Expression Regulation, Neoplastic, Computational Mathematics, Computational Theory and Mathematics, Pairwise comparison, Algorithms, Software, Signal Transduction
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::acb6cade66c43e699fb7356f8c194ee6Test
http://europepmc.org/articles/PMC3117393Test -
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المصدر: BMC Bioinformatics
مصطلحات موضوعية: INDEL Mutation, Genome, Human, Sequence Analysis, RNA, High-Throughput Nucleotide Sequencing, Humans, Exons, RNA, Messenger, Transcriptome, Algorithms, Software
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=pmid________::7f22ba6bed1fc77e5a4bd1a71a1fb38eTest
https://pubmed.ncbi.nlm.nih.gov/25928589Test -
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المؤلفون: Robert Küffner, Katrin Fundel, Ralf Zimmer
المصدر: Bioinformatics. 23:365-371
مصطلحات موضوعية: Statistics and Probability, Dependency (UML), Relation (database), Computer science, MEDLINE, Gene Expression, Information Storage and Retrieval, computer.software_genre, Biochemistry, Set (abstract data type), Protein Interaction Mapping, Molecular Biology, Natural Language Processing, Information retrieval, Parsing, business.industry, Proteins, Relationship extraction, Computer Science Applications, Term (time), Computational Mathematics, Computational Theory and Mathematics, Database Management Systems, Artificial intelligence, business, computer, Algorithms, Software, Natural language, Natural language processing
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::30b5429ff90b66e86b0cf6cf92a4b9fdTest
https://doi.org/10.1093/bioinformatics/btl616Test