المؤلفون: Alessandro La Ferlita, Salvatore Alaimo, Sebastiano Di Bella, Emanuele Martorana, Georgios I. Laliotis, Francesco Bertoni, Luciano Cascione, Philip N. Tsichlis, Alfredo Ferro, Roberta Bosotti, Alfredo Pulvirenti

المصدر: BMC Bioinformatics, Vol 22, Iss 1, Pp 1-16 (2021)

مصطلحات موضوعية: RNA-seq, Stand-alone software, Cloud deployment, Pipeline, Docker, ncRNAs, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

العلاقة: https://doaj.org/toc/1471-2105Test

الوصول الحر: https://doaj.org/article/4e360b93746c4bf4a5e05628bf5e1e7aTest

المؤلفون: La Ferlita A., Alaimo S., Di Bella S., Martorana E., Laliotis G. I., Bertoni F., Cascione L., Tsichlis P. N., Ferro A., Bosotti R., Pulvirenti A.

المساهمون: La Ferlita A., Alaimo S., Di Bella S., Martorana E., Laliotis G.I., Bertoni F., Cascione L., Tsichlis P.N., Ferro A., Bosotti R., Pulvirenti A.

مصطلحات موضوعية: Cloud deployment, Differential expression analysis, Docker, ncRNAs, Pathway analysis, Pipeline, RNA-seq, Stand-alone software

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/34082707; info:eu-repo/semantics/altIdentifier/wos/WOS:000660855500001; volume:22; issue:1; firstpage:1; lastpage:16; numberofpages:16; journal:BMC BIOINFORMATICS; https://hdl.handle.net/10447/624023Test; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85107213740

الإتاحة: https://doi.org/10.1186/s12859-021-04211-7Test
https://hdl.handle.net/10447/624023Test

المؤلفون: Alessandro La Ferlita (10920146), Salvatore Alaimo (6058907), Sebastiano Di Bella (125874), Emanuele Martorana (10920149), Georgios I. Laliotis (8888159), Francesco Bertoni (15861), Luciano Cascione (280104), Philip N. Tsichlis (8888171), Alfredo Ferro (46522), Roberta Bosotti (75220), Alfredo Pulvirenti (10920152)

مصطلحات موضوعية: Artificial Intelligence and Image Processing, Information Systems, RNA-seq, Stand-alone software, Cloud deployment, Pipeline, Docker, ncRNAs, Differential expression analysis, Pathway analysis

العلاقة: https://figshare.com/articles/journal_contribution/Additional_file_2_of_RNAdetector_a_free_user-friendly_stand-alone_and_cloud-based_system_for_RNA-Seq_data_analysis/14728655Test

الإتاحة: https://doi.org/10.6084/m9.figshare.14728655.v1Test

المؤلفون: Alessandro La Ferlita (10920146), Salvatore Alaimo (6058907), Sebastiano Di Bella (125874), Emanuele Martorana (10920149), Georgios I. Laliotis (8888159), Francesco Bertoni (15861), Luciano Cascione (280104), Philip N. Tsichlis (8888171), Alfredo Ferro (46522), Roberta Bosotti (75220), Alfredo Pulvirenti (10920152)

مصطلحات موضوعية: Artificial Intelligence and Image Processing, Information Systems, RNA-seq, Stand-alone software, Cloud deployment, Pipeline, Docker, ncRNAs, Differential expression analysis, Pathway analysis

العلاقة: https://figshare.com/articles/journal_contribution/Additional_file_5_of_RNAdetector_a_free_user-friendly_stand-alone_and_cloud-based_system_for_RNA-Seq_data_analysis/14728664Test

الإتاحة: https://doi.org/10.6084/m9.figshare.14728664.v1Test

المؤلفون: Alessandro La Ferlita (10920146), Salvatore Alaimo (6058907), Sebastiano Di Bella (125874), Emanuele Martorana (10920149), Georgios I. Laliotis (8888159), Francesco Bertoni (15861), Luciano Cascione (280104), Philip N. Tsichlis (8888171), Alfredo Ferro (46522), Roberta Bosotti (75220), Alfredo Pulvirenti (10920152)

مصطلحات موضوعية: Artificial Intelligence and Image Processing, Information Systems, RNA-seq, Stand-alone software, Cloud deployment, Pipeline, Docker, ncRNAs, Differential expression analysis, Pathway analysis

العلاقة: https://figshare.com/articles/journal_contribution/Additional_file_3_of_RNAdetector_a_free_user-friendly_stand-alone_and_cloud-based_system_for_RNA-Seq_data_analysis/14728658Test

الإتاحة: https://doi.org/10.6084/m9.figshare.14728658.v1Test

المؤلفون: Alessandro La Ferlita (10920146), Salvatore Alaimo (6058907), Sebastiano Di Bella (125874), Emanuele Martorana (10920149), Georgios I. Laliotis (8888159), Francesco Bertoni (15861), Luciano Cascione (280104), Philip N. Tsichlis (8888171), Alfredo Ferro (46522), Roberta Bosotti (75220), Alfredo Pulvirenti (10920152)

مصطلحات موضوعية: Artificial Intelligence and Image Processing, Information Systems, RNA-seq, Stand-alone software, Cloud deployment, Pipeline, Docker, ncRNAs, Differential expression analysis, Pathway analysis

العلاقة: https://figshare.com/articles/journal_contribution/Additional_file_4_of_RNAdetector_a_free_user-friendly_stand-alone_and_cloud-based_system_for_RNA-Seq_data_analysis/14728661Test

الإتاحة: https://doi.org/10.6084/m9.figshare.14728661.v1Test

المؤلفون: Salvatore Siena, Emilia Maria Cristina Mazza, Giulia Della Chiara, Chiara Godano, Nicola Zucchini, Valeria Ranzani, Stefania Oliveto, Paola Gruarin, Jens Geginat, Roberto Bosotti, Claudia D'Oria, Elena Carelli, Pierluigi Novellis, Saveria Mazzara, Ylenia Silvestri, Marco Passaro, Alessio Amatu, Marco Alloisio, Antonio Lanzavecchia, Stefano Biffo, Giorgia Alvisi, Federica Gervasoni, Maria Lucia Sarnicola, N. Mariani, Alberto Bardelli, Ramona Bason, Jolanda Brummelman, Mariangela Lorenzo, Giulia Veronesi, Emanuela Bonoldi, Massimiliano Pagani, Daniele Prati, Enrico Opocher, Lorenzo Drufuca, Martina Martinovic, Andrea Sartore-Bianchi, Sergio Abrignani, Alessandro Giani, Marco De Simone, Enrico Lugli, Chiara Cordiglieri, Serena Curti, Grazisa Rossetti, Valeria Bevilacqua, Andrea Pisani Ceretti, Raoul J. P. Bonnal

المساهمون: Bonnal, R. J. P., Rossetti, G., Lugli, E., De Simone, M., Gruarin, P., Brummelman, J., Drufuca, L., Passaro, M., Bason, R., Gervasoni, F., Della Chiara, G., D'Oria, C., Martinovic, M., Curti, S., Ranzani, V., Cordiglieri, C., Alvisi, G., Mazza, E. M. C., Oliveto, S., Silvestri, Y., Carelli, E., Mazzara, S., Bosotti, R., Sarnicola, M. L., Godano, C., Bevilacqua, V., Lorenzo, M., Siena, S., Bonoldi, E., Sartore-Bianchi, A., Amatu, A., Veronesi, G., Novellis, P., Alloisio, M., Giani, A., Zucchini, N., Opocher, E., Ceretti, A. P., Mariani, N., Biffo, S., Prati, D., Bardelli, A., Geginat, J., Lanzavecchia, A., Abrignani, S., Pagani, M.

المصدر: Nature Immunology, 22, 735-745
Nature Immunology, 22, 6, pp. 735-745

مصطلحات موضوعية: Male, 0301 basic medicine, Lung Neoplasms, T-Lymphocytes, Cancer development and immune defence Radboud Institute for Molecular Life Sciences [Radboudumc 2], medicine.medical_treatment, Programmed Cell Death 1 Receptor, Drug Resistance, Datasets as Topic, Kaplan-Meier Estimate, Granzymes, 0302 clinical medicine, Cancer immunotherapy, Single-cell analysis, 80 and over, Immunology and Allergy, RNA-Seq, Non-Small-Cell Lung, Immune Checkpoint Inhibitors, Adjuvant, Colectomy, Chitinases, Cell Differentiation, Forkhead Transcription Factors, Middle Aged, Flow Cytometry, Regulatory, Adult, Aged, Aged, 80 and over, Carcinoma, Non-Small-Cell Lung, Cell Proliferation, Chemotherapy, Adjuvant, Clonal Hematopoiesis, Colon, Colorectal Neoplasms, Disease Progression, Drug Resistance, Neoplasm, Female, Gene Expression Regulation, Neoplastic, Humans, Primary Cell Culture, Single-Cell Analysis, T-Box Domain Proteins, T-Lymphocytes, Regulatory, Immunology, Biology, 03 medical and health sciences, Immune system, medicine, Chemotherapy, Neoplastic, Carcinoma, Immunotherapy, 030104 developmental biology, Gene Expression Regulation, Cell culture, Cancer research, Neoplasm, Granzyme K, Eomesodermin Homolog, Checkpoint Blockade Immunotherapy, 030215 immunology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::73e12ccb9271b3892eb83d8342962f9dTest
https://doi.org/10.1038/s41590-021-00930-4Test

المؤلفون: Di Bella S., La Ferlita A., Carapezza G., Alaimo S., Isacchi A., Ferro A., Pulvirenti A., Bosotti R.

المساهمون: Di Bella S., La Ferlita A., Carapezza G., Alaimo S., Isacchi A., Ferro A., Pulvirenti A., Bosotti R.

مصطلحات موضوعية: ncRNAs, NGS, RNA-Seq, RNA-Seq pipeline

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/31740918; info:eu-repo/semantics/altIdentifier/wos/WOS:000606289200009; volume:21; issue:6; firstpage:1987; lastpage:1998; numberofpages:12; journal:BRIEFINGS IN BIOINFORMATICS; https://hdl.handle.net/10447/617794Test; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85088952662

الإتاحة: https://doi.org/10.1093/bib/bbz110Test
https://hdl.handle.net/10447/617794Test

المؤلفون: Raoul J P, Bonnal, Grazisa, Rossetti, Enrico, Lugli, Marco, De Simone, Paola, Gruarin, Jolanda, Brummelman, Lorenzo, Drufuca, Marco, Passaro, Ramona, Bason, Federica, Gervasoni, Giulia, Della Chiara, Claudia, D'Oria, Martina, Martinovic, Serena, Curti, Valeria, Ranzani, Chiara, Cordiglieri, Giorgia, Alvisi, Emilia Maria Cristina, Mazza, Stefania, Oliveto, Ylenia, Silvestri, Elena, Carelli, Saveria, Mazzara, Roberto, Bosotti, Maria Lucia, Sarnicola, Chiara, Godano, Valeria, Bevilacqua, Mariangela, Lorenzo, Salvatore, Siena, Emanuela, Bonoldi, Andrea, Sartore-Bianchi, Alessio, Amatu, Giulia, Veronesi, Pierluigi, Novellis, Marco, Alloisio, Alessandro, Giani, Nicola, Zucchini, Enrico, Opocher, Andrea Pisani, Ceretti, Nicolò, Mariani, Stefano, Biffo, Daniele, Prati, Alberto, Bardelli, Jens, Geginat, Antonio, Lanzavecchia, Sergio, Abrignani, Massimiliano, Pagani

المصدر: Nature immunology. 22(6)

مصطلحات موضوعية: Adult, Male, Lung Neoplasms, Colon, Primary Cell Culture, Programmed Cell Death 1 Receptor, Datasets as Topic, Kaplan-Meier Estimate, T-Lymphocytes, Regulatory, Granzymes, Carcinoma, Non-Small-Cell Lung, Humans, RNA-Seq, Immune Checkpoint Inhibitors, Colectomy, Aged, Cell Proliferation, Aged, 80 and over, Chitinases, Cell Differentiation, Forkhead Transcription Factors, Middle Aged, Flow Cytometry, Gene Expression Regulation, Neoplastic, Chemotherapy, Adjuvant, Drug Resistance, Neoplasm, Disease Progression, Female, Clonal Hematopoiesis, Single-Cell Analysis, Colorectal Neoplasms, T-Box Domain Proteins

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=pmid________::48c523a2bcc57957bb3cadb323587ea2Test
https://pubmed.ncbi.nlm.nih.gov/34017124Test

المؤلفون: Alessandro La Ferlita, Alfredo Pulvirenti, Giovanni Carapezza, Salvatore Alaimo, Roberta Bosotti, Antonella Isacchi, Sebastiano Di Bella, Alfredo Ferro

المصدر: Briefings in bioinformatics. 21(6)

مصطلحات موضوعية: RNA, Untranslated, Computer science, RNA-Seq, Computational biology, DNA sequencing, 03 medical and health sciences, 0302 clinical medicine, RNA-Seq pipeline, Exome Sequencing, Transcriptome profiling, Molecular Biology, 030304 developmental biology, 0303 health sciences, Base Sequence, NGS, ncRNAs, Sequence Analysis, RNA, Gene Expression Profiling, Chromosome Mapping, High-Throughput Nucleotide Sequencing, Benchmarking, Non-coding RNA, Pipeline (software), Pipeline transport, Identification (information), 030220 oncology & carcinogenesis, RNA, Software, Information Systems

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb3ee68bb048ae7c7bf256e7ed17f99dTest
https://pubmed.ncbi.nlm.nih.gov/31740918Test