المؤلفون: Giovanni Bottegoni, Ruben Abagyan, Manuel Rueda

المصدر: Journal of Chemical Information and Modeling. 49:716-725

مصطلحات موضوعية: Binding Sites, Protein Conformation, Chemistry, General Chemical Engineering, Proteins, General Chemistry, Library and Information Sciences, Article, Computer Science Applications, Crystallography, Protein structure, Normal mode, Searching the conformational space for docking, Docking (molecular), Calibration, Side chain, Cross-docking, Binding site, Biological system, Conformational isomerism

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a6b731727bb5f4bc01d546a04f9fcc1Test
https://doi.org/10.1021/ci8003732Test

المؤلفون: Jordi Camps, Josep Lluís Gelpí, Modesto Orozco, Alberto Perez, Carles Ferrer-Costa, Tim Meyer, Manuel Rueda

المصدر: Proceedings of the National Academy of Sciences. 104:796-801

مصطلحات موضوعية: Models, Molecular, Protein Folding, Multidisciplinary, OPLS, Protein Conformation, Chemistry, Protein dynamics, Computational Biology, Proteins, Crystallography, X-Ray, Molecular dynamics, Protein structure, Computational chemistry, Physical Sciences, Computer Simulation, Protein folding, Statistical physics, Nuclear Magnetic Resonance, Biomolecular, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bd237808bd21281fb3dd4fd066b1a359Test
https://doi.org/10.1073/pnas.0605534104Test

المؤلفون: Vsevolod, Katritch, Manuel, Rueda, Ruben, Abagyan

المصدر: Methods in molecular biology (Clifton, N.J.). 857

مصطلحات موضوعية: Models, Molecular, Binding Sites, Protein Conformation, Structural Homology, Protein, Drug Design, Humans, Proteins, Ligands, Monte Carlo Method, Algorithms, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=pmid________::145c5a01fdffcde67ddf065fa7a508cbTest
https://pubmed.ncbi.nlm.nih.gov/22323222Test

المؤلفون: Amelie Stein, Manuel Rueda, Modesto Orozco, Alejandro Panjkovich, Patrick Aloy

المصدر: Structure (London, England : 1993). 19(6)

مصطلحات موضوعية: Chemistry, Protein Conformation, Association (object-oriented programming), Protein domain, Proteins, Plasma protein binding, Molecular Dynamics Simulation, Crystallography, Structural biology, Structural Biology, Protein Interaction Networks, Protein Interaction Mapping, Biophysics, Thermodynamics, Protein Interaction Domains and Motifs, Molecular Biology, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b8695b78bbd4ac4762bfb31b52928eafTest
https://pubmed.ncbi.nlm.nih.gov/21645858Test

المؤلفون: Ruben Abagyan, Manuel Rueda, Giovanni Bottegoni

مصطلحات موضوعية: Virtual screening, Stereochemistry, Chemistry, Protein Conformation, General Chemical Engineering, High selectivity, Drug Evaluation, Preclinical, Proteins, General Chemistry, Library and Information Sciences, Ligands, Small molecule, Article, Computer Science Applications, Benchmarking, User-Computer Interface, Protein structure, Protein–ligand docking, Computational chemistry, Docking (molecular), Searching the conformational space for docking, Area Under Curve, Databases, Protein, Conformational isomerism

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3c33bab538d31a088fb4c7312e63c98cTest
https://hdl.handle.net/11576/2688462Test

المؤلفون: Modesto Orozco, Javier A. Velázquez-Muriel, Manuel Rueda, Isabel Cuesta, Alberto Pascual-Montano, José María Carazo

المصدر: BMC Structural Biology, Vol 9, Iss 1, p 6 (2009)
BMC Structural Biology

مصطلحات موضوعية: Models, Molecular, Protein domain, Biology, Plateau (mathematics), 01 natural sciences, 03 medical and health sciences, Molecular dynamics, Protein structure, Sequence Analysis, Protein, Structural Biology, 0103 physical sciences, Computer Simulation, Amino Acid Sequence, Statistical physics, lcsh:QH301-705.5, 030304 developmental biology, Flexibility (engineering), 0303 health sciences, Sequence Homology, Amino Acid, 010304 chemical physics, Proteins, Function (mathematics), Protein structure prediction, Protein Structure, Tertiary, Crystallography, Models, Chemical, lcsh:Biology (General), Protein folding, Research Article

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::04ce433510a91f9d60bc4f945f693dd3Test
http://www.biomedcentral.com/1472-6807/9/6Test

المؤلفون: Pablo Chacón, Manuel Rueda, Modesto Orozco

المصدر: Structure (London, England : 1993). 15(5)

مصطلحات موضوعية: Flexibility (engineering), Quantitative Biology::Biomolecules, Deformation (mechanics), Computer science, Dynamics (mechanics), Normal Distribution, Proteins, Modal, Models, Chemical, Normal mode, Computational chemistry, Structural Biology, Thermodynamics, Computer Simulation, Biological system, Molecular Biology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::52c8ac735a0ae3016c414adb69db7f52Test
https://pubmed.ncbi.nlm.nih.gov/17502102Test

المؤلفون: Ruben Abagyan, Manuel Rueda, Eugene Raush, Vsevolod Katritch

المصدر: Bioinformatics. 26:2784-2785

مصطلحات موضوعية: Statistics and Probability, Web server, Theoretical computer science, Protein Conformation, Computer science, 030303 biophysics, Ligands, computer.software_genre, Biochemistry, Web tool, Computational science, 03 medical and health sciences, Software, Text mining, Computer Graphics, Molecular symmetry, Graphics, Databases, Protein, Molecular Biology, 030304 developmental biology, Internet, 0303 health sciences, business.industry, Proteins, 3. Good health, Computer Science Applications, Applications Note, Computational Mathematics, Identification (information), Computational Theory and Mathematics, business, computer, Protein ligand

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3f0ea6a936d6235bb71791d32f39456Test
https://doi.org/10.1093/bioinformatics/btq504Test

المؤلفون: Giovanni Bottegoni, Ruben Abagyan, Walter Rocchia, Andrea Cavalli, Manuel Rueda

المساهمون: Bottegoni G., Rocchia W., Rueda M., Abgyan R., Cavalli A, Gasset, Maria

المصدر: PLoS ONE
PloS one, vol 6, iss 5
PLoS ONE, Vol 6, Iss 5, p e18845 (2011)

مصطلحات موضوعية: Protein Conformation, lcsh:Medicine, Ligands, Bioinformatics, Biochemistry, Computational Chemistry, Protein structure, Receptors, Drug Discovery, Macromolecular Structure Analysis, Combinatorial Chemistry Techniques, Biomacromolecule-Ligand Interactions, lcsh:Science, Protocol (object-oriented programming), Multidisciplinary, Drug discovery, Chemistry, Physics, Cell Surface, Medicine, Biophysic Al Simulations, Algorithms, Research Article, Biotechnology, Protein Binding, Protein Structure, Drugs and Devices, Drug Research and Development, General Science & Technology, Biophysics, Receptors, Cell Surface, Computational biology, Protein Chemistry, Chemical Biology, Humans, Set (psychology), Biology, Flexibility (engineering), Virtual screening, Ligand, lcsh:R, Proteins, Computational Biology, Small Molecules, Drug Design, lcsh:Q, Generic health relevance, Medicinal Chemistry

وصف الملف: application/pdf; STAMPA

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b777bd5d7a1d76d9debd8372062b3638Test
https://doi.org/10.1371/journal.pone.0018845Test

المؤلفون: Modesto Orozco, Manuel Rueda, Ruben Abagyan, Maxim Totrov

المساهمون: Universitat de Barcelona

المصدر: Recercat. Dipósit de la Recerca de Catalunya
instname
BMC Structural Biology
Rueda, Manuel; Orozco, Modesto; Totrov, Maxim; & Abagyan, Ruben. (2013). BioSuper: A web tool for the superimposition of biomolecules and assemblies with rotational symmetry. BMC Structural Biology, 13(1), 32. doi: http://dx.doi.org/10.1186/1472-6807-13-32Test. Retrieved from: http://www.escholarship.org/uc/item/9dh1d8z8Test
Dipòsit Digital de la UB
Universidad de Barcelona

مصطلحات موضوعية: Models, Molecular, Web server, Computer science, Protein Conformation, Rotational symmetry, computer.software_genre, Protein Structure, Secondary, Biologia computacional, Computational biology, 03 medical and health sciences, User-Computer Interface, Biomolècules, Structural Biology, Computer Graphics, Superimposition, Databases, Protein, Interactive visualization, Root-mean-square deviation, 030304 developmental biology, Oligòmers, Biomolecules, 0303 health sciences, Internet, 030302 biochemistry & molecular biology, Computational Biology, Proteins, computer.file_format, Protein Data Bank, Protein Structure, Tertiary, Crystallography, Oligomers, Symmetry (geometry), Protein Multimerization, computer, Algorithm, Proteïnes, Software, Generator (mathematics)

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a603f8e201e9c75a59fbd2abc5fc274bTest
http://hdl.handle.net/2445/54510Test