المؤلفون: Evdokiya Salamanova, Mariyana Atanasova, Ivan Dimitrov, Irini Doytchinova

المصدر: Molecules; Volume 26; Issue 9; Pages: 2815

مصطلحات موضوعية: curcumin, ferulic acid, amyloid-β peptide, molecular dynamics simulation, folding, secondary structure, solvent-accessible surface area, hydrogen bonding

جغرافية الموضوع: agris

وصف الملف: application/pdf

العلاقة: Natural Products Chemistry; https://dx.doi.org/10.3390/molecules26092815Test

الإتاحة: https://doi.org/10.3390/molecules26092815Test

المؤلفون: Lin Wang, Junjian Chen, Xiangze Zeng, Peter Pak‐Hang Cheung, Xiaoyan Zheng, Liangxu Xie, Xuetao Shi, Li Ren, Xuhui Huang, Yingjun Wang

المصدر: Advanced Science, Vol 6, Iss 9, Pp n/a-n/a (2019)

مصطلحات موضوعية: antibacterial activity, fusion peptides, molecular dynamics simulation, solvent accessible surface area, surface modification, Science

وصف الملف: electronic resource

العلاقة: https://doaj.org/toc/2198-3844Test

الوصول الحر: https://doaj.org/article/314ae8c81630468db765a01be3b18ea8Test

المؤلفون: Zhiliang Yuan, Zhi Qu, Bo Duan, Tianyi Wang, Jiajun Xu, Bin Xia

المصدر: International Journal of Biological Macromolecules

مصطلحات موضوعية: Models, Molecular, Protein Conformation, alpha-Helical, Amyloid, Protein Folding, NMR, Nuclear magnetic resonance, MD, Molecular dynamics, animal structures, macromolecular substances, Molecular Dynamics Simulation, RMSF, Root mean square fluctuation, Biochemistry, Article, Polymerization, Protein Domains, Structural Biology, Disulfides, Molecular Biology, Coronavirus 3C Proteases, SASA, Solvent accessible surface area, SEC, Size-exclusion chromatography, 3D domain swapping, Amyloid fibrillation, fungi, Temperature, General Medicine, Amyloidosis, Recombinant Proteins, Kinetics, CD, Circular dichroism, Mutation, Dimerization, Mpro-C, C-terminal domain of SARS-CoV main protease

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2bea496e0a0f54c5901fdf5c865e5409Test
https://pubmed.ncbi.nlm.nih.gov/34953805Test

المؤلفون: Shankar Prasad Kanaujia, Prerana Gogoi

المصدر: Computational and Structural Biotechnology Journal, Vol 17, Iss, Pp 333-344 (2019)
Computational and Structural Biotechnology Journal

مصطلحات موضوعية: R15P, ribose-1,5-bisphosphate, lcsh:Biotechnology, Biophysics, NMP, nucleoside 5′-monophosphate, Pentose, Isomerase, Pentose phosphate pathway, R15Pi, ribose-1,5-bisphosphate isomerase, Biochemistry, RMSF, root mean square fluctuation, RMSD, root mean square deviation, 03 medical and health sciences, chemistry.chemical_compound, Ribulose-1,5-bisphosphate, 0302 clinical medicine, Nucleoside 5′-monophosphate degradation pathway, Structural Biology, lcsh:TP248.13-248.65, Molecular dynamics simulation, Ribose, Genetics, ADP-R1P, ADP-dependentribose-1-phosphate, Binding site, ASU, asymmetric unit, 030304 developmental biology, chemistry.chemical_classification, 0303 health sciences, RuBisCO, ribulose-1,5-bisphosphate carboxylase/oxygenase, biology, EFBE, estimated free energy of binding, LGA, Lamarckian genetic algorithm, Active site, Substrate (chemistry), Invariant water molecule, MD, molecular dynamics, 3-PGA, 3-phosphoglycerate, Computer Science Applications, Enzyme, chemistry, Ribose-1,5-bisphosphate, RuBP, ribulose-1,5-bisphosphate, 030220 oncology & carcinogenesis, Molecular docking, biology.protein, SASA, solvent accessible surface area, R1P, ribose-1-phosphate, Research Article, Biotechnology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4df8ca57bee8665c7a9efe8536c2ec57Test
http://www.sciencedirect.com/science/article/pii/S2001037019300054Test

المؤلفون: Anthony J. Clark, Richard A. Friesner, Mengzhen Sun, Robert Abel, Lingle Wang, Christopher Negron, Kevin Hauser

المصدر: Journal of Molecular Biology

مصطلحات موضوعية: Databases, Factual, Entropy, HIV Antibodies, HIV Envelope Protein gp120, Molecular Dynamics Simulation, Ligands, Article, Biophysical Phenomena, Accessible surface area, Free energy perturbation, FEP, free energy perturbation, 03 medical and health sciences, 0302 clinical medicine, Protein structure, RMSE, root mean square error, Structural Biology, Drug Discovery, Side chain, antibodies, Protein Interaction Domains and Motifs, free energy perturbation, Molecular Biology, bNAb, broadly neutralizing antibody, SKEMPI, Structural database of Kinetics and Energetics of Mutant Protein Interactions, 030304 developmental biology, 0303 health sciences, Sequence, Chemistry, MM, molecular mechanics, fSASA, fractional solvent accessible surface area, Computational Biology, Proteins, Charge (physics), Hydrogen Bonding, Protein engineering, Small molecule, MD, molecular dynamics, Antibodies, Neutralizing, protein-protein binding, Mutation, mm-GB/SA, molecular mechanics generalized Born surface area, Biological system, 030217 neurology & neurosurgery, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a3e26e51a641a23ad2a8bbcca21e2142Test
http://europepmc.org/articles/PMC6453258Test

المؤلفون: Yayin Fang, Riley M. Geoghegan, Kevin F. Morris, Emily E. Palmer, Matthew George

المصدر: Biochemistry and Biophysics Reports
Biochemistry and Biophysics Reports, Vol 21, Iss, Pp-(2020)

مصطلحات موضوعية: 0301 basic medicine, Tafamidis, Conformational change, Val122Ile mutant, Stereochemistry, HBP, Halogen Binding Pocket, Biophysics, SASA, Solvent Accessible Surface Area, MD, Molecular Dynamics, Biochemistry, Transthyretin, Accessible surface area, lcsh:Biochemistry, 03 medical and health sciences, chemistry.chemical_compound, Molecular dynamics, 0302 clinical medicine, Molecular dynamics simulation, DO-AG10, Decarboxy-AG10, FAC, Familial Amyloidal Cardiomyopathy, lcsh:QD415-436, lcsh:QH301-705.5, V122I, Val122Ile mutant of transthyretin, TTR, Transthyretin, biology, Ligand, Hydrogen bond, 3. Good health, 030104 developmental biology, chemistry, lcsh:Biology (General), 030220 oncology & carcinogenesis, biology.protein, RMSD, Root Mean Squared Deviation, AG10, Methyl group, Research Article

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1b21883651e1e7879c01453effbf5c94Test
https://pubmed.ncbi.nlm.nih.gov/32055713Test

المؤلفون: Yue Sun, Galahad Deperalta, Saeed Izadi, Matthew D. Callahan, Aaron T. Wecksler

المصدر: The Journal of Biological Chemistry

مصطلحات موضوعية: 0301 basic medicine, Glycosylation, Protein Conformation, DNA Mutational Analysis, Receptors, Fc, Biochemistry, Fragment antigen-binding, Receptor, FA, formic acid, Antibody-dependent cell-mediated cytotoxicity, biology, Chemistry, Editors' Pick, afucosylation, N297, asparagine 297, Fab, fragment antigen-binding, Antibody, mAbs, monoclonal antibodies, Research Article, antibody-dependent cellular cytotoxicity, Protein Binding, Glycan, Fuc, fucose, medicine.drug_class, Fab–Fc receptor interactions, CHO Cells, LC, light chain, Molecular Dynamics Simulation, Immunoglobulin light chain, Monoclonal antibody, CHO, Chinese hamster ovary, fast photochemical oxidation of proteins (FPOP), Immunoglobulin Fab Fragments, 03 medical and health sciences, FcγRIIIa, Cricetulus, nG0-F, normalized G0-F, medicine, Animals, Molecular Biology, Fucose, mAb, IgG1, immunoglobulin G1, ADCC, antibody-dependent cellular cytotoxicity, 030102 biochemistry & molecular biology, Hydroxyl Radical, IgG1, HC, heavy chain, Antibody-Dependent Cell Cytotoxicity, SASA, solvent-accessible surface area, Cell Biology, Fragment crystallizable region, molecular dynamics, 030104 developmental biology, Immunoglobulin G, Mutation, hydroxyl radical footprinting-mass spectrometry, biology.protein, Biophysics, HRF, hydroxyl radical footprint, HDX, hydrogen–deuterium exchange

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fc1434bc455747921029f61b4b0ee4f0Test
https://doi.org/10.1016/j.jbc.2021.100826Test

المؤلفون: Irini Doytchinova, Mariyana Atanasova, Ivan Dimitrov, Evdokiya Salamanova

المصدر: Molecules
Volume 26
Issue 9
Molecules, Vol 26, Iss 2815, p 2815 (2021)

مصطلحات موضوعية: Models, Molecular, folding, Protein Folding, Coumaric Acids, Static Electricity, Pharmaceutical Science, Peptide, Ligands, amyloid-β peptide, Article, Protein Structure, Secondary, Analytical Chemistry, Ferulic acid, chemistry.chemical_compound, QD241-441, Drug Discovery, curcumin, Physical and Theoretical Chemistry, Protein secondary structure, chemistry.chemical_classification, Amyloid beta-Peptides, Protein Stability, Chemistry, Hydrogen bond, Organic Chemistry, solvent-accessible surface area, secondary structure, hydrogen bonding, Folding (chemistry), molecular dynamics simulation, Monomer, Chemistry (miscellaneous), Intramolecular force, Solvents, Curcumin, Biophysics, Molecular Medicine, ferulic acid

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e75ec87cd76b46a8a4d020eb40778b76Test
https://doi.org/10.3390/molecules26092815Test

المؤلفون: Wang, Lin CHEM, Chen, Junjian, Zeng, Xiangze, Cheung, Pak Hang Peter, Zheng, Xiaoyan, Xie, Liangxu, Shi, Xuetao, Ren, Li, Huang, Xuhui, Wang, Yingjun

مصطلحات موضوعية: Antibacterial activity, Fusion peptides, Molecular dynamics simulation, Solvent accessible surface area, Surface modification

العلاقة: http://repository.ust.hk/ir/Record/1783.1-96315Test; Advanced Science, v. 6, (9), May 2019, article number 1801827; https://doi.org/10.1002/advs.201801827Test; http://lbdiscover.ust.hk/uresolver?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rfr_id=info:sid/HKUST:SPI&rft.genre=article&rft.issn=2198-3844&rft.volume=&rft.issue=&rft.date=2019&rft.spage=&rft.aulast=Wang&rft.aufirst=&rft.atitle=Mechanistic+Insights+and+Rational+Design+of+a+VersatileTest+Surface+with+Cells%2FBacteria+Recognition+Capability+via+Orientated+Fusion+Peptides&rft.title=Advanced+Science; http://www.scopus.com/record/display.url?eid=2-s2.0-85062370513&origin=inwardTest; http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=LinksAMR&SrcApp=PARTNER_APP&DestLinkType=FullRecord&DestApp=WOS&KeyUT=000467524500008Test

الإتاحة: https://doi.org/10.1002/advs.201801827Test
http://repository.ust.hk/ir/Record/1783.1-96315Test
http://lbdiscover.ust.hk/uresolver?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rfr_id=info:sid/HKUST:SPI&rft.genre=article&rft.issn=2198-3844&rft.volume=&rft.issue=&rft.date=2019&rft.spage=&rft.aulast=Wang&rft.aufirst=&rft.atitle=Mechanistic+Insights+and+Rational+Design+of+a+VersatileTest+Surface+with+Cells%2FBacteria+Recognition+Capability+via+Orientated+Fusion+Peptides&rft.title=Advanced+Science
http://www.scopus.com/record/display.url?eid=2-s2.0-85062370513&origin=inwardTest
http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=LinksAMR&SrcApp=PARTNER_APP&DestLinkType=FullRecord&DestApp=WOS&KeyUT=000467524500008Test

المؤلفون: Shinn-Ying Ho, Hui Ling Huang, Yi Fan Liou

المصدر: BMC Bioinformatics

مصطلحات موضوعية: Models, Molecular, Protein Conformation, alpha-Helical, 0301 basic medicine, Protein Folding, Physicochemical properties, Stereochemistry, Bioinformatics, Biochemistry, Protein Structure, Secondary, Accessible surface area, 03 medical and health sciences, Molecular dynamics, Knowledge discovery, Protein structure, Structural Biology, Molecular dynamics simulation, Humans, Computer Simulation, Amino Acids, Databases, Protein, Molecular Biology, SPINE (molecular biology), Solvent-accessible surface area, 030102 biochemistry & molecular biology, Chemistry, Research, Applied Mathematics, Proteins, computer.file_format, Hydrophobic spine, Protein Data Bank, Computer Science Applications, Folding (chemistry), Support vector regression, 030104 developmental biology, Data Interpretation, Statistical, Helix, Solvents, Protein folding, Hydrophobic and Hydrophilic Interactions, computer, Algorithms

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b59c23076b2c1f3b9d023f345b59d66dTest
https://doi.org/10.1186/s12859-016-1368-zTest