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1Quantification of somatic mutation flow across individual cell division events by lineage sequencing
المؤلفون: Joshua J Elacqua, Robert J. Kimmerling, Gad Getz, David Benjamin, Yehuda Brody, Paul C. Blainey, Scott R. Manalis, Yosef E. Maruvka, Kristjana Frangaj, Jaegil Kim, Kent W. Mouw, Amnon Koren, Nicholas J. Haradhvala
المصدر: Genome Research. 28:1901-1918
مصطلحات موضوعية: 0301 basic medicine, Mutation rate, Lineage (genetic), DNA Copy Number Variations, Genotype, Somatic cell, DNA Mutational Analysis, Population, Method, Computational biology, Biology, medicine.disease_cause, Polymorphism, Single Nucleotide, Time-Lapse Imaging, DNA sequencing, Cell Line, 03 medical and health sciences, Germline mutation, Single-cell analysis, Genetics, medicine, Humans, education, Genetics (clinical), Mutation, education.field_of_study, High-Throughput Nucleotide Sequencing, 030104 developmental biology, Single-Cell Analysis, Cell Division
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d7fa9789c3d42d3aac57b48b1ab3c6d3Test
https://doi.org/10.1101/gr.238543.118Test -
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المؤلفون: Tetiana Bogdanova, Vidushi Kapoor, Mykola Chepurny, Stephen W. Hartley, Yosef E. Maruvka, Danielle M. Karyadi, Sara J. Schonfeld, Meredith Yeager, Casey L. Dagnall, Lindsay M. Morton, Eric T. Dawson, Elizabeth K. Cahoon, Kiyohiko Mabuchi, Marko Krznaric, Charles M. Perou, Gad Getz, Julie M. Gastier-Foster, Vladimir Drozdovitch, Amy Berrington de Gonzalez, Juan Carvajal-Garcia, Gerry Thomas, Sergii Masiuk, Joshua N. Sampson, Joseph Boland, Stephen J. Chanock, Mitchell J. Machiela, Belynda Hicks, Olivia W. Lee, Joel S. Parker, Amy Hutchinson, Liudmyla Yu Zurnadzhy, Jay Bowen, Jieqiong Dai, Mykola Tronko, Mia Steinberg, Maureen Hatch, Chip Stewart, Dale A. Ramsden, Alina V. Brenner
المصدر: Science
مصطلحات موضوعية: Male, Pathology, Neoplasms, Radiation-Induced, endocrine system diseases, Thyroid Gland, Loss of Heterozygosity, Chernobyl Nuclear Accident, medicine.disease_cause, Translocation, Genetic, Loss of heterozygosity, Iodine Radioisotopes, Epigenome, Medicine, RNA-Seq, Child, Thyroid cancer, Epigenomics, Mutation, Multidisciplinary, Middle Aged, Thyroid Cancer, Papillary, Child, Preschool, Female, Ukraine, Adult, Proto-Oncogene Proteins B-raf, medicine.medical_specialty, Adolescent, DNA Copy Number Variations, General Science & Technology, Biology, Radiation Dosage, Article, Thyroid carcinoma, Young Adult, Humans, Thyroid Neoplasms, Carcinogen, Whole Genome Sequencing, business.industry, Gene Expression Profiling, Genetic Variation, Infant, medicine.disease, Genes, ras, Genomic Profile, Cancer research, business
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::95668a536a62d6cccbc34d600b2bf33dTest
https://pubmed.ncbi.nlm.nih.gov/33888599Test -
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المؤلفون: Yossi Farjoun, Yehuda Brody, Eric Banks, Paul C. Blainey, Megan Shand, Yosef E. Maruvka, Jose Soto, Lee Lichtenstein, David Benjamin
مصطلحات موضوعية: Mutation, Somatic cell, In silico, medicine, Copy-number variation, Computational biology, Cell lineage, Biology, Indel, medicine.disease_cause, Genome, Germline
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4bf3802d6dd793e9ebf4730f8b9c426aTest
https://doi.org/10.1101/825042Test -
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المؤلفون: Gad Getz, Alan D. D'Andrea, Rosa Karlic, Yehuda Brody, Michael S. Lawrence, Yosef E. Maruvka, Andre Bernards, Julian M. Hess, Franziska Michor, Kent W. Mouw, Paz Polak, Lior Z. Braunstein, Prasanna Parasuraman, Atanas Kamburov, Nicholas J. Haradhvala, Adam J. Bass, Amnon Koren, Esther Rheinbay
المصدر: Nat Biotechnol
مصطلحات موضوعية: 0301 basic medicine, Somatic cell, Biomedical Engineering, Bioengineering, Biology, medicine.disease_cause, Applied Microbiology and Biotechnology, Article, 03 medical and health sciences, INDEL Mutation, Neoplasms, medicine, Humans, Exome, RNA, Messenger, Indel, Gene, Genetics, Mutation, High-Throughput Nucleotide Sequencing, RNA-Binding Proteins, food and beverages, Microsatellite instability, Cancer, medicine.disease, Cancer genetics, Genome informatics, 030104 developmental biology, MSH3, Molecular Medicine, Microsatellite, Microsatellite Instability, Genes, Neoplasm, Microsatellite Repeats, Biotechnology
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4de1347d3579cf95f7dca215a3c7a338Test
https://doi.org/10.1038/nbt.3966Test -
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المؤلفون: Mehdi Mesri, Akhilesh Pandey, Lauren C. Tang, Shayan C. Avanessian, Stefani N. Thomas, Emily S. Boja, Chen Huang, Lili Blumenberg, Mauricio Oberti, Peter B. McGarvey, Karen A. Ketchum, Zhen Zhang, Amanda G. Paulovich, Samuel H. Payne, Ratna R. Thangudu, Karsten Krug, Gad Getz, Shuang Cai, David I. Heiman, Karl R. Clauser, David F. Ransohoff, Nathan Edwards, Ie Ming Shih, Chet Birger, Gordon Whiteley, Michael Snyder, Tara Hiltke, Paul A. Rudnick, Christopher R. Kinsinger, Philipp Mertins, Subha Madhavan, Henry Rodriguez, Melinda E. Sanders, Jingqin Luo, Xian Chen, Yosef E. Maruvka, Kenna M. Shaw, George Miles, Shunqiang Li, Eric Kuhn, Lisa J. Zimmerman, Zhiao Shi, Christopher G. Maher, Stephen E. Stein, Thomas F. Westbrook, Matthew A. Wyczalkowski, Daniel W. Chan, Bo Wen, Xi Steven Chen, Song Cao, Hui Zhang, Yifat Geffen, Jason E. McDermott, Yuxing Liao, Yue Wang, Yingming Zhao, David L. Tabb, Mathangi Thiagarajan, D. R. Mani, Matthew J. Ellis, Forest M. White, Robert Rivers, Heng Zhu, Yongchao Dou, David Fenyö, Antonio Colaprico, Shankha Satpathy, Eric J. Jaehnig, Jeffrey R. Whiteaker, Li Ding, Meenakshi Anurag, Karin D. Rodland, Andrew N. Hoofnagle, Ana I. Robles, Kelly V. Ruggles, Steven A. Carr, Richard D. Smith, Jacob J. Kennedy, Tao Liu, Robbert J.C. Slebos, Maciej Wiznerowicz, Daniel C. Liebler, M. Harry Kane, Jonathan T. Lei, Alla Karpova, Ramani B. Kothadia, Douglas A. Levine, Bing Zhang, Michael A. Gillette, Jarey Wang
المصدر: Cell
Elsevierمصطلحات موضوعية: Adult, DNA Repair, Carcinogenesis, Receptor, ErbB-2, medicine.medical_treatment, Breast Neoplasms, Biology, Proteomics, medicine.disease_cause, Retinoblastoma Protein, General Biochemistry, Genetics and Molecular Biology, Article, Targeted therapy, Cohort Studies, 03 medical and health sciences, 0302 clinical medicine, Breast cancer, medicine, Tumor Microenvironment, Humans, Metabolomics, APOBEC Deaminases, Molecular Targeted Therapy, Phosphorylation, Protein Kinase Inhibitors, 030304 developmental biology, Aged, Proteogenomics, Aged, 80 and over, 0303 health sciences, Phosphoproteomics, Amplicon, Middle Aged, medicine.disease, Immune checkpoint, Mutagenesis, Cancer research, Female, Immunotherapy, Technology Platforms, Protein Kinases, 030217 neurology & neurosurgery, DNA Damage
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f59aa97d338438527c048cae9e15d045Test
http://europepmc.org/articles/PMC8077737Test -
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المؤلفون: Yuxing Liao, Meghan C. Burke, Donghui Tan, Xiaoyu Song, Lauren C. Tang, Elizabeth R. Duffy, Shayan C. Avanessian, Daniel Cui Zhou, Maureen Dyer, Sara R. Savage, Jennifer M. Eschbacher, Shaleigh Smith, Alex Webster, Alicia Francis, Kelly V. Ruggles, Christopher R. Kinsinger, Shirley Tsang, Melissa Borucki, Nancy Roche, Pei Wang, Qing Kay Li, David Chesla, Ronald Matteotti, Zeynep H. Gümüş, Kai Li, Kei Suzuki, Thomas L. Bauer, Lori J. Sokoll, John McGee, Marcin J. Domagalski, Ki Sung Um, Tara Hiltke, Hai-Quan Chen, Hongwei Liu, Eric E. Schadt, Antonio Colaprico, Alyssa Charamut, Lijun Chen, Emily Kawaler, Ramani B. Kothadia, Mehdi Mesri, Jiayi Ji, Simina M. Boca, Myvizhi Esai Selvan, Emily S. Boja, Xi Chen, Shuang Cai, Kim Elburn, Samuel H. Payne, George D. Wilson, Peter B. McGarvey, Chelsea J. Newton, Felipe da Veiga Leprevost, Uma Velvulou, Tara Skelly, Corbin D. Jones, Michael J. Birrer, Steven A. Carr, Erik J. Bergstrom, Jeffrey R. Whiteaker, Michael H.A. Roehrl, Gad Getz, Tanya Krubit, Zhen Zhang, Yan Shi, Lili Blumenberg, Melanie A. MacMullan, Song Cao, Zhiao Shi, Weiping Ma, Chet Birger, Karl R. Clauser, Runyu Hong, Shankha Satpathy, Andrii Karnuta, Boris Reva, Barbara Hindenach, Matthew J. Ellis, Amanda G. Paulovich, Michael C. Wendl, Bing Zhang, Marina A. Gritsenko, Matthew A. Wyczalkowski, Stacey Gabriel, Michael A. Gillette, Jacob J. Day, Maciej Wiznerowicz, Stephen E. Stein, Ewa P. Malc, Robert J. Welsh, Sunita Shankar, Brian J. Druker, Li Ding, Lijun Yao, David J. Clark, Małgorzata Wojtyś, Dmitry Rykunov, Eugene S. Fedorov, Linda Hannick, Andrew K. Godwin, Sailaja Mareedu, Pushpa Hariharan, Mary Beth Beasley, Stephanie De Young, Arul M. Chinnaiyan, Robert Zelt, Mathangi Thiagarajan, Munziba Khan, Suhas Vasaikar, Tao Liu, Karin D. Rodland, Katherine A. Hoadley, Wen-Wei Liang, Ana I. Robles, Dana R. Valley, Sanford P. Markey, Mikhail Krotevich, David I. Heiman, Piotr A. Mieczkowski, Galen Hostetter, Liqun Qi, Yige Wu, Hui Zhang, Liang-Bo Wang, Nathan Edwards, Ramaswamy Govindan, Yifat Geffen, Seema Chugh, Alexey I. Nesvizhskii, Karen A. Ketchum, Pankaj Vats, Matthew E. Monroe, Marcin Cieslik, Yingwei Hu, Karsten Krug, Yosef E. Maruvka, Yize Li, Ratna R. Thangudu, William W. Maggio, Sandra Cottingham, Saravana M. Dhanasekaran, Wenke Liu, Hua Sun, Sonya Carter, Volodymyr Sovenko, M. Harry Kane, Annette Marrero-Oliveras, Barbara Pruetz, Amy M. Perou, Gilbert S. Omenn, Azra Krek, Olga Potapova, Michael S. Noble, Daniel W. Chan, Seungyeul Yoo, Eric J. Burks, Bo Wen, William Bocik, Michael Vernon, Henry Rodriguez, James Suh, Scott D. Jewell, MacIntosh Cornwell, Richard D. Smith, Chandan Kumar-Sinha, Halina M. Krzystek, Daniel C. Rohrer, Tatiana Omelchenko, D. R. Mani, Houston Culpepper, Vladislav A. Petyuk, Meng-Hong Sun, Michelle Chaikin, David Fenyö, Rahul Mannan, Bartosz Kubisa, Rohit Mehra, Rajwanth R. Veluswamy, Umut Ozbek, Michael Schnaubelt, Francesca Petralia, Elena V. Ponomareva, Rashna Madan, Pamela Grady, Karna Robinson, Negin Vatanian
المصدر: Cell
مصطلحات موضوعية: 0303 health sciences, Phosphoproteomics, Genomics, Environmental exposure, Computational biology, Biology, Proteomics, Proteogenomics, medicine.disease_cause, Article, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Neutrophil degranulation, medicine, KRAS, 030217 neurology & neurosurgery, 030304 developmental biology, Epigenomics
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::643fa1bca4947fad3182f7ffcf3016adTest
https://doi.org/10.1016/j.cell.2020.06.013Test -
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المؤلفون: Paz Polak, Julian M. Hess, Jaegil Kim, Atanas Kamburov, Dimitri Livitz, Ignaty Leshchiner, Kent W. Mouw, Daniel Rosebrock, Gad Getz, Nicholas J. Haradhvala, Yosef E. Maruvka, Michael S. Lawrence
المصدر: Nature Communications
Nature Communications, Vol 9, Iss 1, Pp 1-9 (2018)مصطلحات موضوعية: DNA Replication, 0301 basic medicine, Mutation rate, Science, General Physics and Astronomy, Computational biology, medicine.disease_cause, DNA Mismatch Repair, Article, General Biochemistry, Genetics and Molecular Biology, Cohort Studies, 03 medical and health sciences, Mismatch Repair Pathway, Databases, Genetic, medicine, Humans, lcsh:Science, Polymerase, Loss function, DNA Polymerase III, Mutation, Multidisciplinary, biology, Genome, Human, DNA replication, DNA Polymerase II, General Chemistry, Endometrial Neoplasms, 030104 developmental biology, biology.protein, Proofreading, lcsh:Q, Female, DNA mismatch repair
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a2fd9f39847c1bee9312b1b399a8e8cdTest
https://doi.org/10.1038/s41467-018-04002-4Test -
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المؤلفون: Amber L. Sorenson, Noam Shoresh, Roy Kishony, Franziska Michor, Anna Selmecki, Subhajyoti De, Marie Guillet, Phillip A. Richmond, David Pellman, Robin D. Dowell, Yosef E. Maruvka
المصدر: Nature
مصطلحات موضوعية: Mutation rate, Time Factors, Genetic Fitness, Saccharomyces cerevisiae, Haploidy, Biology, medicine.disease_cause, Article, Polyploidy, Mutation Rate, Gene duplication, medicine, Point Mutation, 2. Zero hunger, Genetics, Multidisciplinary, Point mutation, fungi, Fungal genetics, food and beverages, Aneuploidy, Diploidy, Adaptation, Physiological, Biological Evolution, Clone Cells, Chromosomes, Fungal, Adaptation, Ploidy, Carcinogenesis
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::746ccc82843ffb6663ca64a3b9f5fb4dTest
http://europepmc.org/articles/PMC4497379Test -
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المؤلفون: Amaro Taylor-Weiner, Gad Getz, Jose Baselga, Jesse Lee, Leif W. Ellisen, Grace Tiao, Sara Seepo, Alfredo Hidalgo-Miranda, Mara Rosenberg, Trevor J. Pugh, Jesse S. Boehm, Jonna Grimsby, Julian M. Hess, Zongli Zheng, Jesse M. Engreitz, Toshi Shioda, Chip Stewart, Adam Tracy, Prasanna Parasuraman, Andre Bernards, Carrie Cibulskis, Maria L. Cortes, Jaegil Kim, Petar Stojanov, Esther Rheinbay, Todd R. Golub, Sergio Rodríguez-Cuevas, Eric S. Lander, Michael S. Lawrence, Stacey Gabriel, A. John Iafrate, Matthew Meyerson, Yosef E. Maruvka
المساهمون: Broad Institute of MIT and Harvard, Harvard University--MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology. Department of Biology, Engreitz, Jesse Michael, Lander, Eric Steven, Rheinbay, Esther, Lawrence, Michael, Cortes, Maria, Gabriel, Stacey, Meyerson, Matthew L, Golub, Todd, Getz, Gad Asher
المصدر: PMC
مصطلحات موضوعية: 0301 basic medicine, Hepatocyte Nuclear Factor 3-alpha, Breast Neoplasms, Biology, medicine.disease_cause, Deep sequencing, Article, Cohort Studies, 03 medical and health sciences, Breast cancer, medicine, Coding region, Humans, Exome, Promoter Regions, Genetic, Gene, Genetics, Mutation, Multidisciplinary, Cancer, High-Throughput Nucleotide Sequencing, Promoter, medicine.disease, E2F Transcription Factors, Gene Expression Regulation, Neoplastic, 030104 developmental biology, Receptors, Estrogen, RNA, Long Noncoding, Protein Binding
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9b810e29576bee8237bc99ffc0f68972Test
https://europepmc.org/articles/PMC5563978Test/ -
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المؤلفون: Yosef E. Maruvka, Adam Spiro, Yitzhak Reizel, Rivka Adar, Ehud Shapiro, Liran I. Shlush, Noa Chapal-Ilani
المصدر: PLoS Computational Biology
PLoS Computational Biology, Vol 9, Iss 11, p e1003297 (2013)مصطلحات موضوعية: Male, Lineage (genetic), Somatic cell, Context (language use), Bone Marrow Cells, Mice, Transgenic, Biology, medicine.disease_cause, 03 medical and health sciences, Cellular and Molecular Neuroscience, Mice, 0302 clinical medicine, Genetics, medicine, Animals, Cluster Analysis, Humans, Cell Lineage, Computer Simulation, Molecular Biology, Neighbor joining, lcsh:QH301-705.5, Ecology, Evolution, Behavior and Systematics, Organism, Cells, Cultured, Phylogeny, 030304 developmental biology, 0303 health sciences, Mutation, Ecology, Models, Genetic, Computational Biology, Genomic signature, 3. Good health, Sexual reproduction, Computational Theory and Mathematics, lcsh:Biology (General), Modeling and Simulation, Female, Algorithm, 030217 neurology & neurosurgery, Algorithms, Research Article, Microsatellite Repeats
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::095f68c08d4c8998d229618bb20fbed4Test
http://europepmc.org/articles/PMC3828138Test