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المؤلفون: Hyun Jae Cho, Nathan C. Sheffield, Aaron Gu
المصدر: Genome Biology, Vol 22, Iss 1, Pp 1-14 (2021)
Genome Biologyمصطلحات موضوعية: region set, Source code, Jaccard index, Computer science, perturbation, QH301-705.5, media_common.quotation_subject, genomics experiemnts, Short Report, Perturbation (astronomy), bedshift, Biology, QH426-470, computer.software_genre, Set (abstract data type), Similarity (network science), Genetics, Humans, Biology (General), Genomic interval, media_common, Genome, business.industry, Cosine similarity, similarity metrics, Pattern recognition, Genomics, HCT116 Cells, BED file, Euclidean distance, Benchmark (computing), Chromatin Immunoprecipitation Sequencing, Data mining, Artificial intelligence, business, computer, Software, genomic interval
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fcf8f348aed1faec73b95c9ca3466842Test
https://doaj.org/article/8c0a2f0a0d91421680a433afead04598Test -
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المؤلفون: Michael J. Guertin, Kizhakke Mattada Sathyan, Arun B. Dutta, Nathan C. Sheffield, Jason P. Smith
المصدر: Genome Biology
Genome Biology, Vol 22, Iss 1, Pp 1-17 (2021)مصطلحات موضوعية: Quality Control, Downstream (software development), QH301-705.5, media_common.quotation_subject, QH426-470, Biology, computer.software_genre, Genetics, Humans, Quality (business), Biology (General), media_common, Database, Genome, Human, Adapter (computing), Gene Expression Profiling, RNA, Exons, Pipeline (software), Introns, ComputingMethodologies_PATTERNRECOGNITION, Workflow, Rna profiling, Scalability, K562 Cells, computer, Software
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c858ea1c8ef54369a497ea676b47e032Test
https://doi.org/10.1186/s13059-021-02349-4Test -
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المؤلفون: Manuela Krumbholz, Caroline Hutter, Susan A. Burchill, Mathieu Chicard, Eleni M. Tomazou, Nathan C. Sheffield, André F. Rendeiro, Adrian M. Stütz, Heidrun Boztug, Ola Myklebost, Bekir Ergüner, Marcus Tötzl, Gaëlle Pierron, Sabine Taschner-Mandl, Perrine Marec-Berard, Didier Surdez, Markus Metzler, Marie Bernkopf, G Schleiermacher, Sandra J. Strauss, Gernot Engstler, Uta Dirksen, Peter F. Ambros, Inge M. Ambros, Eve Lapouble, Jeremy Whelan, Michael Dworzak, Christiane Schaefer, Kjetil Boye, Christoph Bock, Bernadette Brennan, Olivier Delattre, Sabine Semper, Abbas Agaimy, Daniele Barreca, Peter Peneder
المصدر: Nature Communications
Nature Communications, Vol 12, Iss 1, Pp 1-16 (2021)مصطلحات موضوعية: Epigenomics, Male, 0301 basic medicine, DNA Mutational Analysis, Medizin, General Physics and Astronomy, Circulating Tumor DNA, 0302 clinical medicine, Cancer genomics, Medicine, Child, Multidisciplinary, Middle Aged, 3. Good health, Cell-free fetal DNA, Child, Preschool, 030220 oncology & carcinogenesis, DNA fragmentation, Female, Adult, Adolescent, Science, Bone Neoplasms, Sarcoma, Ewing, Computational biology, Article, General Biochemistry, Genetics and Molecular Biology, Paediatric cancer, Young Adult, 03 medical and health sciences, Biomarkers, Tumor, Humans, Epigenetics, Liquid biopsy, Whole genome sequencing, Whole Genome Sequencing, business.industry, Liquid Biopsy, Infant, Cancer, General Chemistry, medicine.disease, 030104 developmental biology, Case-Control Studies, Mutation, business, Software, Biomarkers
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::102bf24f9b568f385bcc97dfa6a528feTest
https://hdl.handle.net/11250/2990790Test -
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المؤلفون: Nathan C. Sheffield, John T. Lawson, Stefan Bekiranov, Francine E. Garrett-Bakelman, Jason P. Smith
المصدر: Genome Biology, Vol 21, Iss 1, Pp 1-23 (2020)
Genome Biologyمصطلحات موضوعية: Epigenomics, lcsh:QH426-470, Principal component analysis, Method, Breast Neoplasms, Computational biology, Biology, Epigenesis, Genetic, Bioconductor, Genetic Heterogeneity, Humans, EZH2, Epigenetics, lcsh:QH301-705.5, Cancer, Multi-omics, Chromatin accessibility, DNA methylation, food and beverages, Molecular Sequence Annotation, Dimensionality reduction, Human genetics, lcsh:Genetics, R package, lcsh:Biology (General), Biological significance, Multi omics, Data integration, Software
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9054b14122a2e601c0e1c6bf91baa3caTest
https://doi.org/10.1101/2020.07.09.195289Test -
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المؤلفون: Nathan C. Sheffield, Jason P. Smith
المصدر: Curr Protoc Hum Genet
مصطلحات موضوعية: Data Analysis, Protocol (science), 0303 health sciences, Data processing, Computer science, genetic processes, 030305 genetics & heredity, High-Throughput Nucleotide Sequencing, Transposases, ATAC-seq, Sequence Analysis, DNA, General Medicine, Computational biology, Chromatin, Article, DNA binding site, 03 medical and health sciences, Chromatin Immunoprecipitation Sequencing, Humans, Nucleosome, natural sciences, Research questions, 030304 developmental biology
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd45826a37b189d4f8294e1c21970ce7Test
https://doi.org/10.1002/cphg.101Test -
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المؤلفون: Nathan C. Sheffield, VP Nagraj, Neal E. Magee
المصدر: Nucleic Acids Research
مصطلحات موضوعية: 0301 basic medicine, Web server, Download, Biology, Regulatory Sequences, Nucleic Acid, computer.software_genre, 03 medical and health sciences, Mice, User-Computer Interface, 0302 clinical medicine, Software, Server, Databases, Genetic, Genetics, sort, Animals, Humans, Interactive visualization, Internet, Information retrieval, business.industry, Genomics, 030104 developmental biology, Scalability, Web Server Issue, The Internet, business, computer, 030217 neurology & neurosurgery
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::48aed08e2e7b165ed4cbdf36b3ecfdbfTest
http://europepmc.org/articles/PMC6030814Test -
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المؤلفون: Chongzhi Zang, Mete Civelek, Michael J. Guertin, Nathan C. Sheffield, Zhenjia Wang, Clint L. Miller
المصدر: Bioinformatics. 34:2867-2869
مصطلحات موضوعية: Epigenomics, 0301 basic medicine, Statistics and Probability, Sequence analysis, Computer science, Computational biology, Biochemistry, DNA sequencing, Mice, 03 medical and health sciences, 0302 clinical medicine, Transcription (biology), Databases, Genetic, Animals, Humans, Enhancer, Molecular Biology, Transcription factor, Gene, 030304 developmental biology, Regulation of gene expression, 0303 health sciences, 030302 biochemistry & molecular biology, Sequence Analysis, DNA, Applications Notes, Computer Science Applications, Computational Mathematics, ComputingMethodologies_PATTERNRECOGNITION, 030104 developmental biology, Gene Expression Regulation, Computational Theory and Mathematics, Genomic Profile, Functional genomics, Software, 030217 neurology & neurosurgery, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::943e27b7b02ca57374f65ff023c3cf80Test
https://doi.org/10.1093/bioinformatics/bty194Test -
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المؤلفون: M. Ryan Corces, Howard Y. Chang, Nathan C. Sheffield, Jose A. Seoane, Jean C. Zenklusen, Bryan H. Louie, Jeffrey M. Granja, Peter W. Laird, Ina Felau, A. Gordon Robertson, Christopher K. Wong, Seung Woo Cho, Tiago C. Silva, Katherine A. Hoadley, Benjamin P. Berman, Shadi Shams, Christina Curtis, Ansuman T. Satpathy, Mauro A. A. Castro, Wanding Zhou, Clarice S. Groeneveld, William J. Greenleaf, Louis M. Staudt, Maxwell R. Mumbach
المصدر: Science. 362
مصطلحات موضوعية: 0301 basic medicine, DNA Footprinting, Gene regulatory network, Transposases, Computational biology, Regulatory Sequences, Nucleic Acid, Biology, Genome, Article, Histones, 03 medical and health sciences, Neoplasms, Humans, Genetic Predisposition to Disease, Gene, Regulation of gene expression, Multidisciplinary, Immunity, Promoter, Chromatin Assembly and Disassembly, Chromatin, Gene Expression Regulation, Neoplastic, Enhancer Elements, Genetic, 030104 developmental biology, Genetic Loci, Regulatory sequence, Human genome, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::35fe09ce8a434abdaf7fdd4b3600d39bTest
https://doi.org/10.1126/science.aav1898Test -
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المؤلفون: F. Payer, Peter A Winkler, Stefanie Krassnig, Serge Weis, Patrizia Moser, Christian F. Freyschlag, Waltraud Kleindienst, Johanna Buchroithner, Günther Stockhammer, Donát Alpár, Christoph Bock, Stefan Schweiger, Melitta Kitzwoegerer, Johannes A. Hainfellner, Thomas Hauser, Gord von Campe, Franz Marhold, Johannes Haybaeck, Claudius Thomé, Kariem Madhy Ali, Barbara Kiesel, Nadine Peter, Johanna Klughammer, Georg Langs, Thomas Ströbel, Karl-Heinz Nenning, Julia Furtner, Bernhard Baumann, Christine Marosi, Karin Dieckmann, Martha Nowosielski, Mario Mischkulnig, Matthias Preusser, Georg Widhalm, Thomas Roetzer, Camillo Sherif, Engelbert Knosp, Nathan C. Sheffield, Nikolaus Fortelny, Stefan Oberndorfer, Josef Pichler, Astrid E. Grams, Marco Augustin, Julius Preiser, Franz Wurtz, Adelheid Woehrer, Bekir Ergüner, Johannes Trenkler, Paul Datlinger, Amelie Nemc, Martin Senekowitsch, Johannes Kerschbaumer, Martin Stultschnig, Tanisa Brandner-Kokalj
المصدر: Nature Medicine
مصطلحات موضوعية: Male, 0301 basic medicine, Tumour heterogeneity, Bisulfite sequencing, Computational biology, Biology, Article, General Biochemistry, Genetics and Molecular Biology, Epigenesis, Genetic, Genetic Heterogeneity, 03 medical and health sciences, Humans, Epigenetics, Epigenomics, Genome, Human, Genetic heterogeneity, Chromosome Mapping, High-Throughput Nucleotide Sequencing, General Medicine, Epigenome, DNA Methylation, Human genetics, 3. Good health, 030104 developmental biology, DNA methylation, Disease Progression, Female, Neoplasm Recurrence, Local, Glioblastoma
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09f79ad3ec2b2c7f79231b534898b690Test
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المؤلفون: Matthias, Farlik, Nathan C, Sheffield, Angelo, Nuzzo, Paul, Datlinger, Andreas, Schönegger, Johanna, Klughammer, Christoph, Bock
المصدر: Cell Reports, Vol 10, Iss 8, Pp 1386-1397 (2015)
Cell Reportsمصطلحات موضوعية: Epigenomics, Resource, Computational Biology, High-Throughput Nucleotide Sequencing, Cell Differentiation, HL-60 Cells, DNA, Sequence Analysis, DNA, DNA Methylation, Hematopoietic Stem Cells, Cell Line, Mice, lcsh:Biology (General), Animals, Humans, Sulfites, Single-Cell Analysis, K562 Cells, lcsh:QH301-705.5, Embryonic Stem Cells
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::5f78761aa78aa7a06ba67f3373a8ea72Test
http://www.sciencedirect.com/science/article/pii/S2211124715001096Test