المؤلفون: Jason E. Stajich, Paul Keim, de M. Teixeira Mm, Heather L. Mead, Blackmon Av, Jason W. Sahl, Bridget M. Barker, George Richard Thompson

مصطلحات موضوعية: Sanger sequencing, symbols.namesake, biology, Contig, symbols, Copy-number variation, Computational biology, biology.organism_classification, Genome, DNA sequencing, Single molecule real time sequencing, Coccidioides posadasii, Reference genome

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::5669fa9b0e96f51843b7733d18c1573bTest
https://doi.org/10.1101/2021.05.19.444813Test

المؤلفون: Rafael A. Fernández, Charles H. D. Williamson, Theresa J. Smith, Gary Xie, Shannon L. Johnson, Fabrizio Anniballi, Bruna Auricchio, Patricia A. Caballero, Jason W. Sahl, Karen K. Hill, Paul Keim

المصدر: Frontiers in Microbiology
Frontiers in Microbiology, Vol 12 (2021)

مصطلحات موضوعية: Microbiology (medical), Genetics, plasmids, pulE, Phylogenetic tree, Genetic transfer, lcsh:QR1-502, neurotoxin, Biology, Genome, Microbiology, lcsh:Microbiology, Clostridium parabotulinum, lycA, Plasmid, arsC, Gene cluster, Horizontal gene transfer, orfX, Mobile genetic elements, Gene, Original Research

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e020b50741e12e22ebd9b188a67541d5Test
http://europepmc.org/articles/PMC7952441Test

المؤلفون: David M. Wagner, Charles H. D. Williamson, Paul Keim, Jason W. Sahl

المصدر: Journal of AOAC INTERNATIONAL. 101:1920-1926

مصطلحات موضوعية: 0301 basic medicine, Pharmacology, Comparative genomics, Whole genome sequencing, Biodefense, Melioidosis, Burkholderia pseudomallei, 030106 microbiology, Computational biology, Select agent, Biology, medicine.disease, biology.organism_classification, Diagnostic tools, Genome, Analytical Chemistry, 03 medical and health sciences, medicine, Environmental Chemistry, Agronomy and Crop Science, Food Science

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::0a340c5584bd7a055173f157a5a54b22Test
https://doi.org/10.5740/jaoacint.18-0014Test

المؤلفون: Emilie E. L. Muller, Nathan D. Hicks, Karoline Faust, Paul Keim, James M. Schupp, Susana Martinez Arbas, Shaman Narayanasamy, Haixu Tang, Cedric Christian Laczny, Malte Herold, Lance B. Price, Yuzhen Ye, Patrick May, Robert L. Moritz, John D. Gillece, Tony J. Lam, Sujun Li, Michael R. Hoopmann, Cindy M. Liu, Paul Wilmes, Laura Lebrun, Alexander Skupin, Benoit J. Kunath

المساهمون: Génétique moléculaire, génomique, microbiologie (GMGM), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS)

المصدر: Nature Microbiology
Nature Microbiology, Nature Publishing Group, 2020, pp.123-135 + 10 figures. ⟨10.1038/s41564-020-00794-8⟩

مصطلحات موضوعية: Microbiologie [F11] [Sciences du vivant], Ecosystem ecology, phages, Applied Microbiology and Biotechnology, Genome, FILAMENTOUS BACTERIUM, Bacteriophage, Plasmid, TOOL, CRISPR, activated sludge, Bacteriophages, Clustered Regularly Interspaced Short Palindromic Repeats, Microbiology [F11] [Life sciences], ComputingMilieux_MISCELLANEOUS, Genetics, 0303 health sciences, education.field_of_study, Network topology, metatranscriptomics, Sewage, Microbial consortium, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], 6. Clean water, SINGLE CELLS, Life Sciences & Biomedicine, Plasmids, Microbiology (medical), plasmids, GENES, Microbial Consortia, Immunology, Population, Biology, Microbiology, Article, Water Purification, 03 medical and health sciences, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], education, Gene, wastewater, 030304 developmental biology, CANDIDATUS MICROTHRIX-PARVICELLA, ENVIRONMENT, metagenomics, Science & Technology, IDENTIFICATION, SEQUENCES, Bacteria, 030306 microbiology, Bacteriology, Cell Biology, multi-omics, biology.organism_classification, REPEATS, Metagenome, Microbial Interactions, Metagenomics, Microbiome, CRISPR-Cas Systems, Mobile genetic elements, [SDE.BE]Environmental Sciences/Biodiversity and Ecology, time series, RESISTANCE, Genome, Bacterial, [SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis

وصف الملف: Print-Electronic

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7dac7506d8c22c3f208878bdbf2fdcd2Test
http://orbilu.uni.lu/handle/10993/45371Test

المؤلفون: Jason W. Sahl, Andrew Sanchez, Darrin Lemmer, Paul Keim, Nicholas A. Bokulich, Evan Bolyen, Matthew McKay, Crystal M. Hepp, Jason T. Ladner, Anthony Simard, Brendan B. Larsen, John Stachurski, Michael Worobey, J. Gregory Caporaso, David M. Engelthaler, Aakash G. Choudhury, Christopher J. Sewell, Matthew R. Dillon, Chris Holdgraf

المصدر: F1000Research
F1000Research, 9

مصطلحات موضوعية: FOS: Computer and information sciences, Computer science, genome-sampler, Genomics, Computational biology, Genome, Viral, computer.software_genre, Genome, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 0302 clinical medicine, Software, Sars-Cov-2, Genome-sampler, QIIME 2, Bioinformatics, genomics, Humans, Plug-in, Isolation (database systems), General Pharmacology, Toxicology and Pharmaceutics, Pandemics, Phylogeny, 030304 developmental biology, Retrospective Studies, 0303 health sciences, Molecular Epidemiology, General Immunology and Microbiology, Geography, business.industry, SARS-CoV-2, Software Tool Article, fungi, Sampling (statistics), COVID-19, General Medicine, Articles, bioinformatics, Pipeline (software), Workflow, business, computer, 030217 neurology & neurosurgery

وصف الملف: application/application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d0d5ea7a68dc66f3c3be7542f160c31Test
https://pubmed.ncbi.nlm.nih.gov/33500774Test

المؤلفون: Paul Keim, Jessica M. Hill, Tracey D. Biggs, Mark Karavis, Shanmuga Sozhamannan, Robert C. Bernhards, Bruce G. Goodwin, Lance B. Price, Jacquelyn Harris

المصدر: Microbiology Resource Announcements

مصطلحات موضوعية: Strain (chemistry), Mutant, Genome Sequences, Biology, biology.organism_classification, Genome, Microbiology, Bacillus anthracis, Ciprofloxacin, Ciprofloxacin resistance, Plasmid, Immunology and Microbiology (miscellaneous), Genetics, medicine, Molecular Biology, medicine.drug

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::da80df710561f06b0cd3dfe8df673e4cTest
https://pubmed.ncbi.nlm.nih.gov/32273351Test

المؤلفون: Charles H. D. Williamson, Shannon L. Johnson, Rafael A. Fernández, Karen K. Hill, Theresa J. Smith, Paul Keim, Jason W. Sahl, Gary Xie

مصطلحات موضوعية: 0303 health sciences, biology, 030306 microbiology, biology.organism_classification, Genome, Botulinum neurotoxin, Clostridia, 03 medical and health sciences, Plasmid, Evolutionary biology, Gene cluster, Genetics, Southern Hemisphere, Gene, Ecology, Evolution, Behavior and Systematics, Bacteria, 030304 developmental biology, Research Article

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a08e9b90255136026e4d769e58f7a754Test
https://europepmc.org/articles/PMC7144720Test/

المؤلفون: Matthew S. Zinkgraf, Brian J. Rehill, Richard L. Lindroth, Thomas G. Whitham, Gerard J. Allan, Gregory D. Martinsen, Stephen P. DiFazio, Scott A. Woolbright, Paul Keim

المصدر: Ecology and Evolution

مصطلحات موضوعية: 0301 basic medicine, Genetics, Whole genome sequencing, education.field_of_study, Candidate gene, Ecology, Population, quantitative trait loci mapping, food and beverages, Quantitative trait locus, Genome, community and ecosystem genetics, foundation species, 03 medical and health sciences, Populus, 030104 developmental biology, Gene mapping, Genetic linkage, salicinoid phenolic glycoside, defensive chemistry genes, education, Gene, Ecology, Evolution, Behavior and Systematics, Original Research, Nature and Landscape Conservation

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f8c856c8f29cdda55c7e1b8145b68b88Test
https://doi.org/10.1002/ece3.3932Test

المؤلفون: Darrin Lemmer, Charles H. D. Williamson, Jason Travis, Heidie Hornstra, Adam J. Vazquez, Joel Terriquez, Amalee E. Nunnally, Chandler C. Roe, John D. Gillece, David M. Wagner, Jacob Vinocur, Nivedita Nandurkar, Nathan E. Stone, Jason W. Sahl, Paul Keim

المصدر: Microbial Genomics

مصطلحات موضوعية: DNA, Bacterial, Lineage (genetic), antibiotic resistance, Microbial evolution and epidemiology: Population Genomics, Single-nucleotide polymorphism, Context (language use), Genomics, Biology, Genome, Ribotyping, 03 medical and health sciences, Antibiotic resistance, Humans, Genetic variability, Phylogeny, 030304 developmental biology, Whole genome sequencing, Genetics, 0303 health sciences, Cross Infection, Whole Genome Sequencing, 030306 microbiology, Clostridioides difficile, Arizona, transmission, General Medicine, Clostridium Infections, Multilocus sequence typing, Genome, Bacterial, Research Article

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f46f04bafb692b6567a4a8dba9abecb0Test
https://pubmed.ncbi.nlm.nih.gov/31107202Test

المؤلفون: Lora Nordstrom, Gregg S. Davis, Joseph Horwinski, Diana Rolland, Sally Statham, Paul Keim, Lance B. Price, Marc Stegger, Maliha Aziz, Cindy M. Liu, Evgeni V. Sokurenko, James R. Johnson, Brett Weaver, Lori Gauld, Sanjeev Sariya, Timothy J. Johnson, Kara Waits

المصدر: mBio
mBio, Vol 9, Iss 4 (2018)
mBio, Vol 9, Iss 4, p e00470-18 (2018)

مصطلحات موضوعية: 0301 basic medicine, Meat, ST131, Antibiotic resistance, UTI, 030106 microbiology, Biology, medicine.disease_cause, Microbiology, Genome, 03 medical and health sciences, Plasmid, ColV plasmid, Phylogenetics, Virology, medicine, Escherichia coli, Humans, Uropathogenic Escherichia coli, Typing, antimicrobial resistance, Prospective Studies, foodborne, Escherichia coli Infections, Phylogeny, 2. Zero hunger, Genetics, ExPEC, Adhesins, Escherichia coli, poultry, Arizona, host adaptation, QR1-502, 3. Good health, Urinary Tract Infections, Multilocus sequence typing, Host adaptation, Fimbriae Proteins, urinary tract infection, Research Article, Multilocus Sequence Typing, Plasmids

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2301a7af9a50b07e2cfac3b8c1cc64b7Test
http://europepmc.org/articles/PMC6113624Test