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1
المؤلفون: Kami Pekayvaz, Alexander Leunig, Rainer Kaiser, Markus Joppich, Sophia Brambs, Aleksandar Janjic, Oliver Popp, Daniel Nixdorf, Valeria Fumagalli, Nora Schmidt, Vivien Polewka, Afra Anjum, Viktoria Knottenberg, Luke Eivers, Lucas E. Wange, Christoph Gold, Marieluise Kirchner, Maximilian Muenchhoff, Johannes C. Hellmuth, Clemens Scherer, Raquel Rubio-Acero, Tabea Eser, Flora Deák, Kerstin Puchinger, Niklas Kuhl, Andreas Linder, Kathrin Saar, Lukas Tomas, Christian Schulz, Andreas Wieser, Wolfgang Enard, Inge Kroidl, Christof Geldmacher, Michael von Bergwelt-Baildon, Oliver T. Keppler, Mathias Munschauer, Matteo Iannacone, Ralf Zimmer, Philipp Mertins, Norbert Hubner, Michael Hoelscher, Steffen Massberg, Konstantin Stark, Leo Nicolai
المصدر: Nature Communications
مصطلحات موضوعية: Adult, Male, T-Lymphocytes, General Physics and Astronomy, chemical and pharmacologic phenomena, General Biochemistry, Genetics and Molecular Biology, Monocytes, Nasopharynx, Ambulatory Care, Humans, Gene Regulatory Networks, Longitudinal Studies, Aged, Aged, 80 and over, Multidisciplinary, SARS-CoV-2, COVID-19, General Chemistry, biochemical phenomena, metabolism, and nutrition, Middle Aged, Killer Cells, Natural, Gene Expression Regulation, Cardiovascular and Metabolic Diseases, Cytokines, Female, Interferons, Technology Platforms
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6868e3511307cae2a86591340303a260Test
https://pubmed.ncbi.nlm.nih.gov/35197461Test -
2
المؤلفون: Ralf Zimmer, Christian Weber, Markus Joppich
المصدر: Thrombosis and haemostasis. 119(8)
مصطلحات موضوعية: 0301 basic medicine, Databases, Factual, Gene regulatory network, Context (language use), Disease, Computational biology, 030204 cardiovascular system & hematology, Biology, Monocytes, 03 medical and health sciences, Mice, 0302 clinical medicine, microRNA, Animals, Data Mining, Humans, Gene Regulatory Networks, Platelet activation, Gene, Chemokine CCL2, Cell Proliferation, Regulation of gene expression, Inflammation, Gene Expression Profiling, Macrophages, Endothelial Cells, Hematology, Atherosclerosis, Platelet Activation, Gene expression profiling, MicroRNAs, 030104 developmental biology, Gene Expression Regulation, Disease Progression, Chemokines
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53c37e09a3a8dcac724adec66c83d7a8Test
https://pubmed.ncbi.nlm.nih.gov/31378854Test -
3
المؤلفون: Robert Küffner, Pegah Tavakkolkhah, Ralf Zimmer
المصدر: PLoS ONE
PLoS ONE, Vol 13, Iss 8, p e0201382 (2018)مصطلحات موضوعية: 0301 basic medicine, Computer science, Gene regulatory network, Gene Identification and Analysis, Inference, lcsh:Medicine, Gene Expression, Yeast and Fungal Models, Genetic Networks, Biochemistry, Mathematical and Statistical Techniques, Nucleic Acids, Databases, Genetic, Gene Regulatory Networks, lcsh:Science, Regulation of gene expression, Multidisciplinary, Eukaryota, Categorization, Experimental Organism Systems, Three way, Physical Sciences, Saccharomyces Cerevisiae, Analysis of variance, Network Analysis, Statistics (Mathematics), Research Article, Computer and Information Sciences, Network Motifs, Research and Analysis Methods, 03 medical and health sciences, Saccharomyces, Model Organisms, Gene Types, DNA-binding proteins, Genetics, Gene Regulation, Statistical Methods, Operons, Transcription factor, Analysis of Variance, Models, Genetic, business.industry, lcsh:R, Organisms, Fungi, Biology and Life Sciences, Proteins, Pattern recognition, DNA, Yeast, Regulatory Proteins, 030104 developmental biology, Regulon, Gene Expression Regulation, Regulator Genes, lcsh:Q, Artificial intelligence, business, Biological network, Mathematics, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c3161974d29b74b20dc4d39e7187d1a6Test
http://europepmc.org/articles/PMC6078297Test -
4
المؤلفون: Polyana C. Tizioto, Ralf Zimmer, Vinicius Henrique da Silva, Levi Waldron, Ludwig Geistlinger, Aline Silva Mello Cesar, Luiz Lehmann Coutinho, Luciana Correia de Almeida Regitano
المصدر: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Scientific Reports
Scientific Reports, Vol 8, Iss 1, Pp 1-11 (2018)مصطلحات موضوعية: 0301 basic medicine, DNA Copy Number Variations, Quantitative Trait Loci, Population, MÚSCULO ESQUELÉTICO, lcsh:Medicine, Quantitative trait locus, Biology, Article, 03 medical and health sciences, Gene expression, Gene duplication, Animals, Gene Regulatory Networks, Copy-number variation, lcsh:Science, Muscle, Skeletal, education, Gene, Regulation of gene expression, Genetics, education.field_of_study, Multidisciplinary, Sequence Analysis, RNA, Gene Expression Profiling, lcsh:R, Phenotype, 030104 developmental biology, Gene Expression Regulation, lcsh:Q, Cattle
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4ba59d969017f5510a178c5855be7cc8Test
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المؤلفون: Robert Küffner, Ludwig Geistlinger, Ralf Zimmer, Stefan Altmann, Tobias Petri
المصدر: Bioinformatics 31, 2836-2843 (2015)
مصطلحات موضوعية: Statistics and Probability, False discovery rate, Saccharomyces cerevisiae Proteins, Computer science, Gene regulatory network, Inference, Machine learning, computer.software_genre, Biochemistry, Machine Learning, Gene Expression Regulation, Fungal, False Positive Reactions, Gene Regulatory Networks, Spurious relationship, Molecular Biology, Oligonucleotide Array Sequence Analysis, business.industry, Gene Expression Profiling, Systems Biology, Expression (mathematics), Computer Science Applications, Computational Mathematics, Computational Theory and Mathematics, Data mining, Artificial intelligence, business, computer, Algorithms, Software, Signal Transduction
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8965f636fd559ac5c9468e9465f2cecbTest
https://doi.org/10.1093/bioinformatics/btv215Test -
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المؤلفون: Daniel, Marbach, Costello, James C., Robert, Küffner, Vega, Nicole M., Prill, Robert J., Camacho, Diogo M., Allison, Kyle R., Andrej, Aderhold, Richard, Bonneau, Yukun, Chen, Collins, James J., Francesca, Cordero, Martin, Crane, Frank, Dondelinger, Mathias, Drton, Roberto, Esposito, Rina, Foygel, Alberto de la Fuente, Jan, Gertheiss, Pierre, Geurts, Alex, Greenfield, Marco, Grzegorczyk, Anne Claire Haury, Benjamin, Holmes, Torsten, Hothorn, Dirk, Husmeier, Vân Anh Huynh Thu, Alexandre, Irrthum, Manolis, Kellis, Guy, Karlebach, Sophie, Lèbre, Vincenzo De Leo, Aviv, Madar, Subramani, Mani, Fantine, Mordelet, Harry, Ostrer, Zhengyu, Ouyang, Ravi, Pandya, Tobias, Petri, Andrea, Pinna, Poultney, Christopher S., Serena, Rezny, Ruskin, Heather J., Yvan, Saeys, Ron, Shamir, Sirbu, Alina, Mingzhou, Song, Nicola, Soranzo, Alexander, Statnikov, Gustavo, Stolovitzky, Nicci, Vega, Paola Vera Licona, Jean Philippe Vert, Alessia, Visconti, Haizhou, Wang, Louis, Wehenkel, Lukas, Windhager, Yang, Zhang, Ralf, Zimmer
المساهمون: Daniel Marbach, James C Costello, Robert Küffner, Nicole M Vega, Robert J Prill, Diogo M Camacho, Kyle R Allison, Andrej Aderhold, Richard Bonneau, Yukun Chen, James J Collin, Francesca Cordero, Martin Crane, Frank Dondelinger, Mathias Drton, Roberto Esposito, Rina Foygel, Alberto de la Fuente, Jan Gerthei, Pierre Geurt, Alex Greenfield, Marco Grzegorczyk, Anne-Claire Haury, Benjamin Holme, Torsten Hothorn, Dirk Husmeier, Vân Anh Huynh-Thu, Alexandre Irrthum, Manolis Kelli, Guy Karlebach, Sophie Lèbre, Vincenzo De Leo, Aviv Madar, Subramani Mani, Fantine Mordelet, Harry Ostrer, Zhengyu Ouyang, Ravi Pandya, Tobias Petri, Andrea Pinna, Christopher S Poultney, Serena Rezny, Heather J Ruskin, Yvan Saey, Ron Shamir, Alina Sîrbu, Mingzhou Song, Nicola Soranzo, Alexander Statnikov, Gustavo Stolovitzky, Nicci Vega, Paola Vera-Licona, Jean-Philippe Vert, Alessia Visconti, Haizhou Wang, Louis Wehenkel, Lukas Windhager, Yang Zhang, Ralf Zimmer
المصدر: Nature methods
مصطلحات موضوعية: SELECTION, Bayes theorem, genetic association, Transcription, Genetic, principal component analysis, algorithm, article, bacterial metabolism, biofilm, bootstrapping, computer model, controlled study, Escherichia coli, gene control, gene expression, gene interaction, gene regulatory network, genetic transcription, genetic variability, microarray analysis, microbial community, Monte Carlo method, nonhuman, priority journal, Saccharomyces cerevisiae, Staphylococcus aureus Species Index: Escherichia coli, Staphylococcus aureus, Gene regulatory network, Inference, integration, computer.software_genre, Biochemistry, Bayes' theorem, 0302 clinical medicine, Oligonucleotide Array Sequence Analysis, Genetics, 0303 health sciences, TRANSCRIPTIONAL REGULATORY NETWORK, ESCHERICHIA-COLI, Algorithms, Biotechnology, Reverse engineering, EXPRESSION DATA, Systems biology, In silico, Biology, Machine learning, Article, gene regulatory networks, reverse engineering, 03 medical and health sciences, Gene interaction, Molecular Biology, 030304 developmental biology, Bootstrapping, business.industry, Computational Biology, Gene Expression Regulation, Bacterial, Cell Biology, Artificial intelligence, business, computer, Software, 030217 neurology & neurosurgery
وصف الملف: ELETTRONICO
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::01bd67cd43235cc06f92f7fb3635f0f5Test
https://doi.org/10.1038/nmeth.2016Test -
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المؤلفون: Ralf Zimmer, Mihaela Zavolan, Diana Lieber, Lars Dölken, Jürgen Haas, Lukasz Jaskiewicz, Florian Erhard, Georg Malterer
المصدر: Erhard, F, Haas, J, Lieber, D, Malterer, G, Jaskiewicz, L, Zavolan, M, Doelken, L & Zimmer, R 2014, ' Widespread context dependency of microRNA-mediated regulation ', Genome Research, vol. 24, no. 6, pp. 906-919 . https://doi.org/10.1101/gr.166702.113Test
مصطلحات موضوعية: Gene regulatory network, Computational biology, PAR-CLIP, Cell Line, Tumor, TRANSLATIONAL REPRESSION, Genetics, Humans, Gene silencing, Gene Regulatory Networks, Gene Silencing, RNA, Messenger, Nucleotide Motifs, Transcription factor, Conserved Sequence, Genetics (clinical), GENE-EXPRESSION, Regulation of gene expression, SITES, IDENTIFICATION, biology, Genome, Human, Research, BINDING PROTEINS, RECOGNITION, Chromatin, MicroRNAs, TRANSCRIPTION FACTORS, Histone, DIFFERENTIAL EXPRESSION ANALYSIS, biology.protein, Human genome, TARGET MESSENGER-RNA
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2ef04f6bb8fc21e6e7a67c721c662299Test
https://doi.org/10.1101/gr.166702.113Test -
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المؤلفون: Ralf Zimmer, Gergely Csaba, Evi Berchtold
المصدر: PLoS ONE
PLoS ONE, Vol 11, Iss 10, p e0164513 (2016)مصطلحات موضوعية: 0301 basic medicine, Computer science, Gene regulatory network, lcsh:Medicine, Gene Expression, 02 engineering and technology, Genetic Networks, Bioinformatics, Biochemistry, Gene expression, Databases, Genetic, Transcriptional regulation, Gene Regulatory Networks, lcsh:Science, Regulation of gene expression, Multidisciplinary, Genomics, Physical Sciences, Network Analysis, Research Article, Optimization, Computer and Information Sciences, 0206 medical engineering, Computational biology, Network Motifs, 03 medical and health sciences, DNA-binding proteins, Genetics, Animals, Humans, Gene Regulation, Set (psychology), Gene, Transcription factor, Models, Genetic, Gene Expression Profiling, lcsh:R, Organisms, Fungi, Biology and Life Sciences, Computational Biology, Proteins, Expression (computer science), Genome Analysis, Yeast, Regulatory Proteins, Gene expression profiling, 030104 developmental biology, Gene Expression Regulation, lcsh:Q, Target gene, 020602 bioinformatics, Mathematics, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4dfef47e31ed72000286822ffde258edTest
http://europepmc.org/articles/PMC5056719Test -
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المؤلفون: Robert Pesch, Ralf Zimmer
المصدر: BMC Systems Biology
مصطلحات موضوعية: 0301 basic medicine, Computer science, Systems biology, Big data, ENCODE, Mice, 03 medical and health sciences, 0302 clinical medicine, Species Specificity, Biomedical data, Structural Biology, Modelling and Simulation, Animals, Humans, Web application, Gene Regulatory Networks, Gene regulatory networks (GRN), Molecular Biology, Cross-species transfer, International research, business.industry, Applied Mathematics, Cytoscape, Computational Biology, Data science, Computer Science Applications, Metadata, 030104 developmental biology, Modeling and Simulation, Context specific, Tumor Suppressor Protein p53, K562 Cells, business, Software, 030217 neurology & neurosurgery
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9322666fdb833a3f89d478950fb45618Test
https://doi.org/10.1186/s12918-016-0304-1Test -
10
المؤلفون: Gergely Csaba, Ralf Zimmer, Robert Küffner, Simon Dirmeier, Ludwig Geistlinger
المصدر: Nucleic Acids Research
مصطلحات موضوعية: Genetics, Saccharomyces cerevisiae Proteins, Models, Genetic, Citric Acid Cycle, Fatty Acids, Saccharomyces cerevisiae, Gluconeogenesis, Gene regulatory network, Computational Biology, Data interpretation, Context (language use), Computational biology, Biology, Petri net, biology.organism_classification, Gene Expression Regulation, Fungal, Gene Regulatory Networks, Gene, Phosphoenolpyruvate Carboxykinase (ATP), TRACE (psycholinguistics)
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e1e010a5b06abfd979917f9848bd9614Test
https://doi.org/10.1093/nar/gkt631Test