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المؤلفون: Robert Ietswaart, Benjamin M. Gyori, John A. Bachman, L. Stirling Churchman, Peter K. Sorger
المصدر: Genome Biology
Genome Biology, Vol 22, Iss 1, Pp 1-35 (2021)مصطلحات موضوعية: GeneWalk, Gene set enrichment analysis, lcsh:QH426-470, Computer science, Gene regulatory network, RNA-Seq, Genomics, Context (language use), Computational biology, NET-seq, Biology, Set (abstract data type), Transcriptome, Annotation, 03 medical and health sciences, Mice, 0302 clinical medicine, Differential expression, Similarity (psychology), Databases, Genetic, Machine learning, Animals, Biflavonoids, Humans, Relevance (information retrieval), Gene Regulatory Networks, lcsh:QH301-705.5, Gene, Pathway Commons, GO enrichment, 030304 developmental biology, 0303 health sciences, Functional analysis, Research, Brain, High-Throughput Nucleotide Sequencing, Network representation learning, lcsh:Genetics, ComputingMethodologies_PATTERNRECOGNITION, Gene Ontology, INDRA (Integrated Network and Dynamical Reasoning Assembler), lcsh:Biology (General), Next-generation sequencing, ComputingMethodologies_GENERAL, Functional genomics, Feature learning, 030217 neurology & neurosurgery
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::af4849ab7beb8cabfc9ace377396a437Test
https://pubmed.ncbi.nlm.nih.gov/33526072Test -
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المؤلفون: Brian M. Debo, John A. Stamatoyannopoulos, Andrew B. Stergachis, L. Stirling Churchman, Eric Haugen
المصدر: Science (New York, N.Y.). 368(6498)
مصطلحات موضوعية: Site-Specific DNA-Methyltransferase (Adenine-Specific), Methyltransferase, Computational biology, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Nucleosome, Animals, Humans, Promoter Regions, Genetic, Transcription factor, 030304 developmental biology, Chromatin Fiber, Regulation of gene expression, 0303 health sciences, Multidisciplinary, High-Throughput Nucleotide Sequencing, DNA, Chromatin Assembly and Disassembly, Chromatin, Single Molecule Imaging, Nucleosomes, Template, Drosophila melanogaster, chemistry, Gene Expression Regulation, K562 Cells, 030217 neurology & neurosurgery, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2cf9a5441b46c5aef402e63ca0bfdb53Test
https://pubmed.ncbi.nlm.nih.gov/32587015Test -
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المؤلفون: L. Stirling Churchman, Andreas Mayer
المصدر: Current Protocols in Molecular Biology
مصطلحات موضوعية: 0301 basic medicine, Genetics, Sequence Analysis, RNA, genetic processes, Intracellular Space, RNA, RNA-dependent RNA polymerase, High-Throughput Nucleotide Sequencing, RNA-binding protein, Computational biology, Biology, Non-coding RNA, Long non-coding RNA, Article, 03 medical and health sciences, RNA silencing, 030104 developmental biology, 0302 clinical medicine, natural sciences, Small nucleolar RNA, Molecular Biology, 030217 neurology & neurosurgery, Small nuclear RNA
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6dd49076a0f681fb01fbf72c5f605ab1Test
https://europepmc.org/articles/PMC5669054Test/ -
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المؤلفون: Andreas Mayer, Alex Reynolds, L. Stirling Churchman, Julia di Iulio, Seth Maleri, John A. Stamatoyannopoulos, Richard Sandstrom, Umut Eser, Jeff Vierstra
المصدر: Cell
مصطلحات موضوعية: Transcription Elongation, Genetic, Transcription, Genetic, RNA polymerase II, Computational biology, General Biochemistry, Genetics and Molecular Biology, Article, Transcription (biology), Gene expression, Humans, RNA, Antisense, Promoter Regions, Genetic, Gene, Transcription factor, Genetics, biology, Sequence Analysis, RNA, Biochemistry, Genetics and Molecular Biology(all), Alternative splicing, Exons, Chromatin, Alternative Splicing, Enhancer Elements, Genetic, biology.protein, RNA Polymerase II, Transcription factor II D, HeLa Cells, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6c83d874d481965ef6d2b1c79a818876Test
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المؤلفون: L. Stirling Churchman, Kevin M. Harlen
المصدر: Nature reviews. Molecular cell biology. 18(4)
مصطلحات موضوعية: 0301 basic medicine, Transcription, Genetic, viruses, genetic processes, RNA polymerase II, Computational biology, environment and public health, 03 medical and health sciences, Protein Domains, Humans, Phosphorylation, Molecular Biology, RNA polymerase II holoenzyme, biology, General transcription factor, Chemistry, Cell Biology, enzymes and coenzymes (carbohydrates), 030104 developmental biology, Gene Expression Regulation, health occupations, biology.protein, Transcription factor II F, CTD, Transcription factor II E, RNA Polymerase II, Transcription factor II D, Transcription factor II B, Protein Processing, Post-Translational
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::41bc78bd4b6d6ad6e553577d9e37421dTest
https://pubmed.ncbi.nlm.nih.gov/28248323Test -
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المؤلفون: Andreas Mayer, L. Stirling Churchman, Heather M Landry
المصدر: Current Opinion in Cell Biology
مصطلحات موضوعية: 0301 basic medicine, Transcription Elongation, Genetic, Transcription, Genetic, Sequence analysis, RNA polymerase II, Computational biology, Biology, Article, 03 medical and health sciences, chemistry.chemical_compound, Transcription (biology), RNA polymerase, Animals, Humans, Promoter Regions, Genetic, Gene, Genetics, Regulation of gene expression, Genome, Sequence Analysis, RNA, RNA, Promoter, Cell Biology, DNA-Directed RNA Polymerases, 030104 developmental biology, chemistry, Gene Expression Regulation, biology.protein, RNA Polymerase II
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::681eea1018c40e9e4ce60f91ba48c1a8Test
https://pubmed.ncbi.nlm.nih.gov/28363125Test -
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المؤلفون: Julia di Iulio, Andreas Mayer, John A. Stamatoyannopoulos, Umut Eser, Alex Reynolds, Seth Maleri, L. Stirling Churchman, Richard Sandstrom, Jeff Vierstra
المصدر: The FASEB Journal. 29
مصطلحات موضوعية: Genetics, Transcriptional activity, High resolution, Computational biology, Biology, Molecular Biology, Biochemistry, Biotechnology
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::91ad55c96ea5e57ebf602c19e0539c08Test
https://doi.org/10.1096/fasebj.29.1_supplement.562.1Test -
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المؤلفون: Emily M LeProust, L. Stirling Churchman, Michael T. McManus, Jonathan S. Weissman, Maya Schuldiner, Michael C. Bassik, Weronika Patena, Robert Jan Lebbink, Nicholas T. Ingolia
المصدر: Nature methods
Nature methods, vol 6, iss 6مصطلحات موضوعية: Technology, Messenger, Molecular Sequence Data, Computational biology, Biology, High coverage, Medical and Health Sciences, Biochemistry, Polymerase Chain Reaction, Deep sequencing, Article, Small hairpin RNA, 03 medical and health sciences, 0302 clinical medicine, False positive paradox, Humans, Base sequence, RNA, Messenger, Molecular Biology, 030304 developmental biology, Gene Library, Genetics, 0303 health sciences, Base Sequence, Extramural, Sequence Analysis, RNA, Cell Biology, Biological Sciences, 030220 oncology & carcinogenesis, RNA, Sequence Analysis, Developmental Biology, Biotechnology
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a679239d528f0a055217a79cd07e5a24Test
https://pubmed.ncbi.nlm.nih.gov/19448642Test