المؤلفون: Marie-Edith Gourdel, Christophe Muller, Stéphane Bourg, Philippe Roche, Carine Derviaux, Olivier Sperandio, Bruno O. Villoutreix, David Lagorce, Xavier Morelli, Maria A. Miteva, Jean-Christophe Rain, Laurent Hoffer, Thomas W. Miller, Pascal Bonnet, Nicolas Bosc

المساهمون: Bioinformatique structurale - Structural Bioinformatics, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Molécules Thérapeutiques in silico (MTI), Université Paris Diderot - Paris 7 (UPD7)-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre de Recherche en Cancérologie de Marseille (CRCM), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Aix Marseille Université (AMU), Plateforme d'information et de services pour les maladies rares et les médicaments orphelins (Orphanet), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpital Broussais-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut de Chimie Organique et Analytique (ICOA), Université d'Orléans (UO)-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut de Chimie du CNRS (INC)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC), Hybrigenics [Paris], Hybrigenics, Pharmacochimie Moléculaire et Cellulaire (PMC - UMR_S 648), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Descartes - Paris 5 (UPD5), This work was supported by research funding from the French National Research Agency (ANR-15-CE18-0023, ANR-18-CE11-0023 and ANR-20-COVI-0047), Canceropole PACA Prematuration and U01 CA218259/CA/NCI NIH HHS (USA). N.B. and L.H. were supported by fellowships from ANR-15-CE18-0023. S.B. and P.B. wish to thank the Région Centre Val de Loire for financial support., We acknowledge the Datacentre IT and Scientific Computing plateform of the CRCM., ANR-15-CE18-0023,PPI-Chem,Développement de stratégies innovantes ciblant la modulation spécifique de complexes protéine-proteine(2015), ANR-18-CE11-0023,T6MeD-OC,DE LA DYNAMIQUE ET DIVERSITÉ STRUCTURALE DES COMPLEXES MEMBRANES DU T6SS VERS LE DÉVELOPPEMENT D'INHIBITEUR DE LA VIRULENCE(2018), Bioinformatique structurale, Institut des Matériaux, de Microélectronique et des Nanosciences de Provence (IM2NP), Aix Marseille Université (AMU)-Université de Toulon (UTLN)-Centre National de la Recherche Scientifique (CNRS), Aix Marseille Université (AMU)-Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Assistance publique - Hôpitaux de Paris (AP-HP) (APHP)-Hôpital Broussais-Institut National de la Santé et de la Recherche Médicale (INSERM), Université d'Orléans (UO)-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Orléans (UO)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Bidaut, Ghislain, Développement de stratégies innovantes ciblant la modulation spécifique de complexes protéine-proteine - - PPI-Chem2015 - ANR-15-CE18-0023 - AAPG2015 - VALID, APPEL À PROJETS GÉNÉRIQUE 2018 - DE LA DYNAMIQUE ET DIVERSITÉ STRUCTURALE DES COMPLEXES MEMBRANES DU T6SS VERS LE DÉVELOPPEMENT D'INHIBITEUR DE LA VIRULENCE - - T6MeD-OC2018 - ANR-18-CE11-0023 - AAPG2018 - VALID

المصدر: ACS Chemical Biology
ACS Chemical Biology, American Chemical Society, 2020, 15 (6), pp.1566-1574. ⟨10.1021/acschembio.0c00179⟩
ACS Chemical Biology, 2020, 15 (6), pp.1566-1574. ⟨10.1021/acschembio.0c00179⟩
ACS Chem Biol

مصطلحات موضوعية: 0301 basic medicine, Computer science, [CHIM.THER]Chemical Sciences/Medicinal Chemistry, 01 natural sciences, Biochemistry, drugs, Chemical library, protein-protein interaction, chemistry.chemical_compound, Drug Discovery, inhibitors, [CHIM.CHEM] Chemical Sciences/Cheminformatics, Protein Interaction Maps, CD47, ComputingMilieux_MISCELLANEOUS, [SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], QSAR, General Medicine, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Diversity Library, Molecular Medicine, HTS, [CHIM.CHEM]Chemical Sciences/Cheminformatics, Quantitative structure–activity relationship, PPI, [CHIM.THER] Chemical Sciences/Medicinal Chemistry, Chemical biology, chemical biology, Computational biology, focused library, Article, Protein–protein interaction, diversity, Small Molecule Libraries, 03 medical and health sciences, Molecular descriptor, On demand, SIRPα, Cluster analysis, 010405 organic chemistry, screening, Reproducibility of Results, High-Throughput Screening Assays, 0104 chemical sciences, 030104 developmental biology, ADMET, Models, Chemical, chemistry, chemical libraries, Databases, Chemical

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c064c5ef5cfdd9725784bca1ddfacb1Test
https://hal.archives-ouvertes.fr/hal-02569625/documentTest

المؤلفون: Natacha Oliveira, Maria A. Miteva, David Lagorce, Bruno O. Villoutreix

المصدر: Drug Discovery Today. 22:1131-1133

مصطلحات موضوعية: 0301 basic medicine, Pharmacology, Chemistry, Chemical biology, Nanotechnology, Computational biology, High-Throughput Screening Assays, Pan-assay interference compounds, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, 030220 oncology & carcinogenesis, Drug Discovery, Drug Contamination

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e18818292761d1923ef43e996ad6a710Test
https://doi.org/10.1016/j.drudis.2017.05.017Test

المؤلفون: David Lagorce, Jonathan B. Baell, Bruno O. Villoutreix, Maria A. Miteva, Olivier Sperandio

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Internet, Web server, Information retrieval, Download, Drug discovery, Biology, Bioinformatics, computer.software_genre, Field (computer science), Chemical library, Pan-assay interference compounds, chemistry.chemical_compound, Pharmaceutical Preparations, chemistry, Filter (video), Drug Discovery, Genetics, Web Server issue, Pharmacokinetics, Hit selection, computer, Software

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e5b1ee773a3a3c8b6da79cc0bdf7edfTest
https://doi.org/10.1093/nar/gkv353Test

المؤلفون: Naziha Bakouh, Dominique Eladari, Maxime Louet, Maria A. Miteva, Bruno O. Villoutreix, Yohan Bignon, Gabrielle Planelles, Jacques Teulon, Sara Bitam, David Lagorce

المساهمون: Molécules Thérapeutiques in silico (MTI), Université Paris Diderot - Paris 7 (UPD7)-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre de Recherche des Cordeliers (CRC), Université Paris Diderot - Paris 7 (UPD7)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Diabète athérothrombose et thérapies Réunion Océan Indien (DéTROI), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de La Réunion (UR), Service d’Explorations Fonctionnelles Rénales, Centre hospitalier Félix-Guyon [Saint-Denis, La Réunion], HAL UPMC, Gestionnaire, Université Pierre et Marie Curie - Paris 6 (UPMC)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Paris Diderot - Paris 7 (UPD7)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université de La Réunion (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM), Molécules Thérapeutique in silico, Recherche de molécules à visée thérapeutique par approches In Silico ( MTI ), Université Paris Diderot - Paris 7 ( UPD7 ) -Institut National de la Santé et de la Recherche Médicale ( INSERM ), Centre de Recherche des Cordeliers ( CRC ), Université Paris Diderot - Paris 7 ( UPD7 ) -École pratique des hautes études ( EPHE ) -Université Pierre et Marie Curie - Paris 6 ( UPMC ) -Université Paris Descartes - Paris 5 ( UPD5 ) -Institut National de la Santé et de la Recherche Médicale ( INSERM ), Diabète athérothrombose et thérapies Réunion Océan Indien ( DéTROI ), Institut National de la Santé et de la Recherche Médicale ( INSERM ) -Université de la Réunion ( UR ), CHU Félix Guyon, Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE)

المصدر: Scientific Reports
Scientific Reports, Nature Publishing Group, 2017, 7, pp.7249. ⟨10.1038/s41598-017-07794-5⟩
Scientific Reports, 2017, 7, pp.7249. ⟨10.1038/s41598-017-07794-5⟩
Scientific Reports, Nature Publishing Group, 2017, 7, pp.7249. 〈10.1038/s41598-017-07794-5〉
Scientific Reports, Vol 7, Iss 1, Pp 1-15 (2017)

مصطلحات موضوعية: 0301 basic medicine, Models, Molecular, Quantitative structure–activity relationship, [SDV.BBM.BS] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], Protein Conformation, Science, [CHIM.THER] Chemical Sciences/Medicinal Chemistry, In silico, Drug Evaluation, Preclinical, Quantitative Structure-Activity Relationship, Computational biology, [CHIM.THER]Chemical Sciences/Medicinal Chemistry, Pharmacology, Bartter syndrome, Article, Membrane Potentials, 03 medical and health sciences, Protein structure, Chlorides, Chloride Channels, medicine, Animals, Humans, Amino Acid Sequence, Membrane potential, Virtual screening, Multidisciplinary, Molecular Structure, [SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], Chemistry, [ CHIM.THER ] Chemical Sciences/Medicinal Chemistry, medicine.disease, 3. Good health, Drug repositioning, 030104 developmental biology, Mutation, Chloride channel, Medicine, Cattle, Disease Susceptibility, Ion Channel Gating, [ SDV.BBM.BS ] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM]

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8cc71b54f23fb0454d678dbf974777f4Test
https://hal.sorbonne-universite.fr/hal-01580157/file/s41598-017-07794-5.pdfTest

المؤلفون: Mélaine A. Kuenemann, Olivier Sperandio, David Lagorce, Bruno O. Villoutreix, Maria A. Miteva

المصدر: In Silico Drug Discovery and Design ISBN: 9781482217834
In Silico Drug Discovery and Design: Theory, Methods, Challenges, and Applications

مصطلحات موضوعية: Chemistry, In silico, Rational design, Low molecular weight protein, Protein–protein interaction prediction, Computational biology, Bioinformatics

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::647c101d3f228b2ca9224472de5eab43Test
https://doi.org/10.1201/b18799-21Test

المؤلفون: Zhe Zhang, David Lagorce, Emil Alexov, Virginie Y. Martiny, Maria A. Miteva, Yoshihiko Ikeguchi

المصدر: PLoS ONE, Vol 9, Iss 10, p e110884 (2014)
PLoS ONE

مصطلحات موضوعية: Protein Conformation, Chemistry, Pharmaceutical, Spermine Synthase, Mutant, Biophysics, Mutation, Missense, lcsh:Medicine, Molecular Dynamics Simulation, Crystallography, X-Ray, Protein structure, Intellectual Disability, Protein Interaction Mapping, Humans, Binding site, lcsh:Science, Genetics, Virtual screening, Binding Sites, Multidisciplinary, biology, Chemistry, lcsh:R, Rational design, Biology and Life Sciences, Computational Biology, Small molecule, Spermine synthase, Drug Design, Mutation, Mental Retardation, X-Linked, biology.protein, Thermodynamics, lcsh:Q, Protein Multimerization, Small molecule binding, Research Article, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ca27c4ced8eeedc3221e35f57cf57301Test
http://europepmc.org/articles/PMC4207787?pdf=renderTest

المؤلفون: Pablo Carbonell, Gautier Moroy, Bruno O. Villoutreix, Maria A. Miteva, David Lagorce, Virginie Y. Martiny

المصدر: PLoS ONE
PLoS ONE, Vol 8, Iss 9, p e73587 (2013)

مصطلحات موضوعية: Models, Molecular, Quantitative structure–activity relationship, In silico, Science, Quantitative Structure-Activity Relationship, Computational biology, Molecular Dynamics Simulation, Bioinformatics, Crystallography, X-Ray, Ligands, 01 natural sciences, Xenobiotics, Small Molecule Libraries, 03 medical and health sciences, 0103 physical sciences, Humans, Computer Simulation, Binding site, 030304 developmental biology, 0303 health sciences, Multidisciplinary, Binding Sites, 010304 chemical physics, Molecular Structure, Chemistry, Ligand (biochemistry), Small molecule, Arylsulfotransferase, 3. Good health, Protein Structure, Tertiary, Docking (molecular), Medicine, Thermodynamics, Small molecule binding, Sulfotransferases, Research Article, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df34ff7e23334479f964e7ad71caccb9Test
http://europepmc.org/articles/PMC3765257Test

المؤلفون: Christelle Reynes, Bruno O. Villoutreix, Philippe Vayer, Florent Chevillard, David Lagorce, Maria A. Miteva

المصدر: Molecular pharmaceutics. 9(11)

مصطلحات موضوعية: Molecular Structure, Chemistry, In silico, Reliability (computer networking), Pharmaceutical Science, Quantitative Structure-Activity Relationship, Water, Chemical similarity, Bioinformatics, computer.software_genre, Random forest, Data set, Models, Chemical, Pharmaceutical Preparations, Solubility, Test set, Drug Discovery, Molecular Medicine, Computer Simulation, Data mining, computer, Protocol (object-oriented programming), Software

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1edf7fed619cef10b7ec40785aeb6827Test
https://pubmed.ncbi.nlm.nih.gov/23072744Test

المؤلفون: Olivier Sperandio, Guillaume Laconde, David Lagorce, Bruno O. Villoutreix, Céline M. Labbé

المساهمون: Molécules Thérapeutiques in silico (MTI), Université Paris Diderot - Paris 7 (UPD7)-Institut National de la Santé et de la Recherche Médicale (INSERM), Sperandio, Olivier

المصدر: Current Pharmaceutical Design
Current Pharmaceutical Design, Bentham Science Publishers, 2012, 18 (30), pp.4648-67
Protein-Protein Interactions in Drug Discovery

مصطلحات موضوعية: Druggability, protein-protein interactions, Bioinformatics, therapeutic targets, 01 natural sciences, Drug likeness, Drug Discovery, MESH: Proteins, Protein Interaction Maps, Enzyme Inhibitors, Chemical space, MESH: Protein Interaction Maps, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM], Principal Component Analysis, 0303 health sciences, [SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Chemistry, Drug discovery, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], MESH: Enzyme Inhibitors, Design drugs, druggability, Protein Binding, enzymes, Computational biology, chemoinformatics, G-Protein Coupled Receptor (GPCR), Article, Protein–protein interaction, Small Molecule Libraries, 03 medical and health sciences, MESH: Computer Simulation, MESH: Drug Discovery, MESH: Small Molecule Libraries, MESH: Protein Binding, Computer Simulation, Set (psychology), 030304 developmental biology, Pharmacology, MESH: Principal Component Analysis, Binding Sites, 010405 organic chemistry, Proteins, compound collection, mutations, 0104 chemical sciences, MESH: Binding Sites, ADME, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f50673bbfe618e15914c8a432263c815Test
https://www.hal.inserm.fr/inserm-00828202/file/Sperandio-CurrPharmDes-Oct2012-for-HAL.pdfTest

المؤلفون: Francesca De Giorgi, Naoual L Benali-Furet, François Ichas, Patrizia Paterlini-Bréchot, Rosario Rizzuto, Ludivine Houel, David Lagorce, Mounia Chami, Ralf Bartenschlager, Fabienne Vernejoul, Louis Buscail

المساهمون: CHU Necker - Enfants Malades [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Carcinogenèse Hépatique et Virologie Moléculaire, Institut National de la Santé et de la Recherche Médicale (INSERM), Università degli Studi di Ferrara (UniFE), Signalisation et Mecanismes Moleculaires de l'Apoptose, Université Bordeaux Segalen - Bordeaux 2-Institut National de la Santé et de la Recherche Médicale (INSERM), Biologie et Pathologie Digestive, IFR 31 Louis Bugnard (IFR 31), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Toulouse [Toulouse]-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Toulouse [Toulouse]-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de la Santé et de la Recherche Médicale (INSERM), Department of Molecular Virology, Universität Heidelberg [Heidelberg]

المصدر: Oncogene
Oncogene, Nature Publishing Group, 2005, 24 (31), pp.4921-33

مصطلحات موضوعية: Cancer Research, [SDV]Life Sciences [q-bio], aequorin, Hepacivirus, Endoplasmic Reticulum, Membrane Potentials, Mice, 0302 clinical medicine, LIVER-CANCER, Promoter Regions, Genetic, Endoplasmic Reticulum Chaperone BiP, Calcium signaling, 0303 health sciences, 3. Good health, Cell biology, Mitochondria, APOPTOSIS, cell death, Liver, 030220 oncology & carcinogenesis, HCV, ER stress, Liver cancer, Programmed cell death, HVC Core, chemistry.chemical_element, Mice, Transgenic, Calcium, Biology, Transfection, Models, Biological, 03 medical and health sciences, HCV core, Cell Line, Tumor, Genetics, In Situ Nick-End Labeling, Animals, Humans, Molecular Biology, 030304 developmental biology, Calcium metabolism, Apoptosis, Calcium signalling, Endoplasmic reticulum, Intracellular Membranes, Virology, CALCIUM SIGNALLING, Calcium ATPase, Mice, Inbred C57BL, chemistry, Unfolded protein response, endoplasmic reticulum, mitochondria

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::328c4f3d8796110062c44fe0770ef41eTest
https://hal.archives-ouvertes.fr/hal-01259965Test