ASL-BIDS, the brain imaging data structure extension for arterial spin labeling
| العنوان: | ASL-BIDS, the brain imaging data structure extension for arterial spin labeling |
|---|---|
| المؤلفون: | Clement, P, Castellaro, M, Okell, TW, Thomas, DL, Vandemaele, P, Elgayar, S, Oliver-Taylor, A, Kirk, T, Woods, JG, Vos, SB, Kuijer, JPA, Achten, E, van Osch, MJP, maintainers, BIDS, Detre, JA, Lu, H, Alsop, DC, Chappell, MA, Hernandez-Garcia, L, Petr, J, Mutsaerts, HJMM |
| المساهمون: | Radiology and nuclear medicine, Amsterdam Neuroscience - Brain Imaging |
| المصدر: | SCIENTIFIC DATA Scientific data, 9(1). Nature Publishing Group Scientific Data, 9(1). NATURE PORTFOLIO BIDS maintainers 2022, ' ASL-BIDS, the brain imaging data structure extension for arterial spin labeling ', Scientific data, vol. 9, no. 1, pp. 543 . https://doi.org/10.1038/s41597-022-01615-9Test PsyArXiv: https://psyarxiv.com/e87y3Test/ Scientific Data 9(2022), 543 |
| سنة النشر: | 2022 |
| مصطلحات موضوعية: | Statistics and Probability, Technology and Engineering, 4-Acetamido-4'-isothiocyanatostilbene-2,2'-disulfonic Acid, InformationSystems_INFORMATIONINTERFACESANDPRESENTATION(e.g.,HCI), ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION, Neuroimaging, Library and Information Sciences, Education, bepress|Life Sciences|Neuroscience and Neurobiology, Medicine and Health Sciences, Humans, DICOM, bepress|Life Sciences|Neuroscience and Neurobiology|Other Neuroscience and Neurobiology, ComputingMilieux_PERSONALCOMPUTING, Brain, Reproducibility of Results, QUANTIFICATION, Magnetic Resonance Imaging, Computer Science Applications, PsyArXiv|Neuroscience, PsyArXiv|Neuroscience|Other Neuroscience and Neurobiology, CEREBRAL-BLOOD-FLOW, ComputingMilieux_COMPUTERSANDSOCIETY, Spin Labels, Statistics, Probability and Uncertainty, Information Systems, MRI |
| الوصف: | Arterial spin labeling (ASL) is a non-invasive MRI technique that allows for quantitative measurement of cerebral perfusion. Incomplete or inaccurate reporting of acquisition parameters complicates quantification, analysis, and sharing of ASL data, particularly for studies across multiple sites, platforms, and ASL methods. There is a strong need for standardization of ASL data storage, including acquisition metadata. Recently, ASL-BIDS, the BIDS extension for ASL, was developed and released in BIDS 1.5.0. This manuscript provides an overview of the development and design choices of this first ASL-BIDS extension, which is mainly aimed at clinical ASL applications. Discussed are the structure of the ASL data, focussing on storage order of the ASL time series and implementation of calibration approaches, unit scaling, ASL-related BIDS fields, and storage of the labeling plane information. Additionally, an overview of ASL-BIDS compatible conversion and ASL analysis software and ASL example datasets in BIDS format is provided. We anticipate that large-scale adoption of ASL-BIDS will improve the reproducibility of ASL research. |
| وصف الملف: | application/pdf |
| اللغة: | English |
| تدمد: | 2052-4463 |
| الوصول الحر: | https://explore.openaire.eu/search/publication?articleId=doi_dedup___::361421b80d4a84b0c441ae4c4999e654Test https://doi.org/10.1038/s41597-022-01615-9Test |
| حقوق: | OPEN |
| رقم الانضمام: | edsair.doi.dedup.....361421b80d4a84b0c441ae4c4999e654 |
| قاعدة البيانات: | OpenAIRE |
| تدمد: | 20524463 |
|---|