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المؤلفون: Robert J. Chalkley, Kai Hooi Khoo, Daniel Kolarich, Erdmann Rapp, Yong Zhang, Hung Yi Wu, Miloslav Sanda, Jonas Nilsson, Enes Sakalli, Gun Wook Park, Doron Kletter, Kathirvel Alagesan, Katalin F. Medzihradszky, Rebeca Kawahara, Nathan Edwards, Radoslav Goldman, Nicolle H. Packer, Yehia Mechref, Wantao Ying, Joseph Zaia, Sriram Neelamegham, Bo Meng, Sergey Y. Vakhrushev, Benjamin L. Schulz, Markus Pioch, Benoit Liquet, Jin Young Kim, Johannes Stadlmann, Benjamin L. Parker, Terry Nguyen-Khuong, Jong Shin Yoo, Adam Pap, Nichollas E. Scott, Mingqi Liu, Marcus Hoffmann, Morten Thaysen-Andersen, Jingfu Zhao, Yingwei Hu, Göran Larson, Matthew S F Choo, Pengyuan Yang, Josef M. Penninger, Marshall Bern, Christina M. Woo, Weiqian Cao, Toan K. Phung, Giuseppe Palmisano, Kai Cheng, Anastasia Chernykh, Stuart M. Haslam, Yifan Huang, Hui Zhang, Cassandra L. Pegg, Georgy Sofronov
المصدر: Nature Methods
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Nature methods, vol 18, iss 11
Kawahara, R, Chernykh, A, Alagesan, K, Bern, M, Cao, W, Chalkley, R J, Cheng, K, Choo, M S, Edwards, N, Goldman, R, Hoffmann, M, Hu, Y, Huang, Y, Kim, J Y, Kletter, D, Liquet, B, Liu, M, Mechref, Y, Meng, B, Neelamegham, S, Nguyen-Khuong, T, Nilsson, J, Pap, A, Park, G W, Parker, B L, Pegg, C L, Penninger, J M, Phung, T K, Pioch, M, Rapp, E, Sakalli, E, Sanda, M, Schulz, B L, Scott, N E, Sofronov, G, Stadlmann, J, Vakhrushev, S Y, Woo, C M, Wu, H Y, Yang, P, Ying, W, Zhang, H, Zhang, Y, Zhao, J, Zaia, J, Haslam, S M, Palmisano, G, Yoo, J S, Larson, G, Khoo, K H, Medzihradszky, K F, Kolarich, D, Packer, N H & Thaysen-Andersen, M 2021, ' Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis ', Nature Methods, vol. 18, no. 11, pp. 1304-1316 . https://doi.org/10.1038/s41592-021-01309-xTestمصطلحات موضوعية: Proteomics, Technology, Glycosylation, Informatics, Proteome, VARIAÇÃO GENÉTICA, Computer science, Glycobiology, Medical and Health Sciences, Biochemistry, Tandem mass spectrum, Software, Tandem Mass Spectrometry, Computational platforms and environments, Humans, Community evaluation, Molecular Biology, Glycoproteins, Research data, business.industry, Glycopeptides, Cell Biology, Biological Sciences, Data science, Research Personnel, Glycoproteomics, Identification (information), business, Analysis, Developmental Biology, Biotechnology
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6fd1540e30b1ed9db633b6604fd71731Test
https://doi.org/10.1038/s41592-021-01309-xTest -
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المؤلفون: Morten Thaysen-Andersen, Rebeca Kawahara, Alexander Pralow, Bernadette M. Saunders, Nilesh J. Bokil, Jessica L Pedersen, Hannes Hinneburg, Erdmann Rapp, Falko Schirmeister
المصدر: Glycobiology. 30:679-694
مصطلحات موضوعية: Glycan, Glycosylation, biology, Chemistry, Macrophages, Monocyte, CD14, Glycopeptides, Proteomics, Biochemistry, Glycome, Monocytes, Cell biology, Glycomics, medicine.anatomical_structure, Polysaccharides, Tandem Mass Spectrometry, biology.protein, medicine, Humans, Macrophage, Fucosylation, Chromatography, Liquid
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1a341e67d84ab053bd2d79ae5e96f838Test
https://doi.org/10.1093/glycob/cwaa020Test -
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المؤلفون: Priya Dipta, Maria J. Pereira, Francesca Forno, Miriam Shmuel, Martin Wabitsch, Morten Thaysen-Andersen, Boaz Tirosh, Xesús Abalo, Jan W. Eriksson, Assel Sarsenbayeva
المصدر: Comprehensive Psychoneuroendocrinology, Vol 7, Iss, Pp 100073-(2021)
مصطلحات موضوعية: Olanzapine, Embryology, medicine.medical_specialty, medicine.medical_treatment, Neurosciences. Biological psychiatry. Neuropsychiatry, Proinflammatory cytokine, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Insulin resistance, Internal medicine, Adipocyte, Diabetes mellitus, medicine, Adipocytes, Macrophage, Antipsychotics, Psychology, 030304 developmental biology, Inflammation, 0303 health sciences, business.industry, Insulin, Macrophages, Cell Biology, medicine.disease, 3. Good health, BF1-990, Endocrinology, chemistry, Aripiprazole, Anatomy, business, 030217 neurology & neurosurgery, Developmental Biology, medicine.drug, RC321-571
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b227af01f8da496562dc35169709ca73Test
http://www.sciencedirect.com/science/article/pii/S2666497621000473Test -
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المؤلفون: Rebeca Kawahara, Fabian Soltermann, Hannes Hinneburg, Siyun Chen, Robert J. Woods, Regis Dieckmann, Morten Thaysen-Andersen, Ian Loke, Vignesh Venkatakrishnan, Weston B. Struwe, Oliver C. Grant, Alison Rodger, Julian Ugonotti, Harry C. Tjondro, Johan Bylund, Benjamin L. Parker, Anna Karlsson-Bengtsson, Sayantani Chatterjee
المصدر: The Journal of Biological Chemistry
مصطلحات موضوعية: 0301 basic medicine, Glycosylation, Az-MPO, azurophilic granule-resident MPO, Neutrophils, GlcNAc, N-acetyl-β-D-glucosamine, HOCl, hypochlorous acid, MPO, myeloperoxidase, N-glycosylation, Biochemistry, SN, maturing neutrophil with segmented nuclei, chemistry.chemical_compound, N-linked glycosylation, Sp granule, specific granule, PMN-nMPO, myeloperoxidase from derived from resting (circulating) neutrophils, Sp-MPO, specific granule-resident MPO, Se/Pl-MPO, secretory vesicle/plasma membrane-resident MPO, CD, circular dichroism, Se/Pl, secretory vesicle and plasma membrane fraction, PMN, polymorphonuclear cell (neutrophil), biology, granulopoiesis, LDH, lactate dehydrogenase, LFQ, label-free quantitation, Glycopeptides, neutrophil, RMSF, root mean squared fluctuation, Editors' Pick, MD, molecular dynamics, inhibition, Cell biology, ceruloplasmin, myeloperoxidase, BN, band neutrophil, Man, α/β-D-mannose, Myeloperoxidase, H2O2, hydrogen peroxide, PGC, porous graphitised carbon, nMPO, neutrophil-derived myeloperoxidase (unfractionated), Research Article, Glycan, Endo H, endoglycosidase H, TMB, 3,3ʹ,5,5ʹ-tetramethylbenzidine, Ge-MPO, gelatinase granule-resident MPO, Cytoplasmic Granules, Granulopoiesis, ER, endoplasmic reticulum, MOI, multiplicity-of-infection, 03 medical and health sciences, Azurophilic granule, Endoglycosidase H, Polysaccharides, PDB, Protein Data Bank, Humans, RMSD, root mean squared deviation, KRG buffer, Krebs-Ringer buffer with glucose, Molecular Biology, Az granule, azurophilic granule, Dg-MPO, degranulated MPO, Peroxidase, PM, promyelocyte, degranulation, 030102 biochemistry & molecular biology, activity, LC-MS/MS, liquid chromatography tandem mass spectrometry, MM, metamyelocyte, Cell Biology, granule, Fuc (F), α-L-fucose, EIC, extracted ion chromatogram, CytB/I, cytochalasin B and ionomycin, 030104 developmental biology, Specific granule, chemistry, biology.protein, AUC, area-under-the-curve, biosynthesis, SD, standard deviation, Ge granule, gelatinase granule
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1fb89deed8bac3a14bb7b67d39adbec0Test
https://pubmed.ncbi.nlm.nih.gov/33273015Test -
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المؤلفون: Rebeca Kawahara, Anastasia Chernykh, Kathirvel Alagesan, Marshall Bern, Weiqian Cao, Robert J. Chalkley, Kai Cheng, Matthew S. Choo, Nathan Edwards, Radoslav Goldman, Marcus Hoffmann, Yingwei Hu, Yifan Huang, Jin Young Kim, Doron Kletter, Benoit Liquet, Mingqi Liu, Yehia Mechref, Bo Meng, Sriram Neelamegham, Terry Nguyen-Khuong, Jonas Nilsson, Adam Pap, Gun Wook Park, Benjamin L. Parker, Cassandra L. Pegg, Josef M. Penninger, Toan K. Phung, Markus Pioch, Erdmann Rapp, Enes Sakalli, Miloslav Sanda, Benjamin L. Schulz, Nichollas E. Scott, Georgy Sofronov, Johannes Stadlmann, Sergey Y. Vakhrushev, Christina M. Woo, Hung-Yi Wu, Pengyuan Yang, Wantao Ying, Hui Zhang, Yong Zhang, Jingfu Zhao, Joseph Zaia, Stuart M. Haslam, Giuseppe Palmisano, Jong Shin Yoo, Göran Larson, Kai-Hooi Khoo, Katalin F. Medzihradszky, Daniel Kolarich, Nicolle H. Packer, Morten Thaysen-Andersen
المصدر: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Nature Methodsمصطلحات موضوعية: Computational platforms and environments, Glycobiology, Cell Biology, Author Correction, GLICOSÍDEOS, Molecular Biology, Biochemistry, Software, Research data, Biotechnology
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::528b2e37d527a1707daee863c55e1de7Test
https://doi.org/10.1038/s41592-021-01368-0Test -
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المؤلفون: Morten Thaysen-Andersen, Vignesh Venkatakrishnan, Alison Rodger, Weston B. Struwe, Oliver C. Grant, Hannes Hinneburg, Harry C. Tjondro, Johan Bylund, Regis Dieckmann, Benjamin L. Parker, Anna Karlsson-Bengtsson, Ian Loke, Sayantani Chatterjee, Rebeca Kawahara, Fabian Soltermann, Siyun Chen, Robert J. Woods, Julian Ugonotti
مصطلحات موضوعية: chemistry.chemical_classification, Glycan, Glycosylation, Innate immune system, biology, Glycobiology, Granulopoiesis, Cell biology, chemistry.chemical_compound, Immune system, chemistry, Myeloperoxidase, biology.protein, Glycoprotein
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::9594e5d688d6efa4222c15101bb32af3Test
https://doi.org/10.1101/2020.07.24.219956Test -
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المؤلفون: Deanne Francis, Kevin I. Watt, Paul Gregorevic, Christopher Ashwood, Long H. Chung, Pengyi Yang, Gregory A. Quaife-Ryan, Morten Thaysen-Andersen, Jodie L. Abrahams, Ronnie Blazev, James E. Hudson, Hongwei Qian, Benjamin L. Parker
مصطلحات موضوعية: Glycan, Glycosylation, biology, Glycobiology, Chemistry, Myogenesis, Skeletal muscle, Glycome, Cell biology, Glycomics, chemistry.chemical_compound, medicine.anatomical_structure, N-linked glycosylation, biology.protein, medicine
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::5ea6bbb00329ea6194b074aa4ad5d4bfTest
https://doi.org/10.1101/2020.06.29.178772Test -
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المصدر: Molecular aspects of medicine. 79
مصطلحات موضوعية: 0301 basic medicine, Glycosylation, Neutrophils, Clinical Biochemistry, Cathepsin G, Biochemistry, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Humans, Molecular Biology, Glycoproteins, chemistry.chemical_classification, Innate immune system, biology, Glycobiology, General Medicine, Neutrophil extracellular traps, Immunity, Innate, Cell biology, 030104 developmental biology, chemistry, 030220 oncology & carcinogenesis, Neutrophil elastase, Myeloperoxidase, biology.protein, Molecular Medicine, Glycoprotein
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::136e73c0fd3c5c5219f7007ccd6ef276Test
https://pubmed.ncbi.nlm.nih.gov/32847678Test -
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المؤلفون: Vignesh Venkatakrishnan, Anna Karlsson-Bengtsson, Niclas G. Karlsson, Morten Thaysen-Andersen, Sayantani Chatterjee, Harry C. Tjondro, Ian Loke, Regis Dieckmann, Johan Bylund
المصدر: J Biol Chem
مصطلحات موضوعية: 0301 basic medicine, Glycan, Glycosylation, Neutrophils, Lewis X Antigen, Glycobiology and Extracellular Matrices, Cytoplasmic Granules, Biochemistry, Granulopoiesis, Epitope, 03 medical and health sciences, chemistry.chemical_compound, Azurophilic granule, N-linked glycosylation, Polysaccharides, Humans, Sialyl Lewis X Antigen, Molecular Biology, Differential centrifugation, 030102 biochemistry & molecular biology, biology, Chemistry, Granule (cell biology), Cell Biology, Glycome, Cell biology, carbohydrates (lipids), 030104 developmental biology, biology.protein, Intracellular
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b69aee2f301d6bd2b0747b1bf879fab5Test
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المؤلفون: Morten Thaysen-Andersen, Ian Loke, Daniel Kolarich, Nicolle H. Packer
المصدر: Molecular Aspects of Medicine. 51:31-55
مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Glycosylation, Clinical Biochemistry, Mannose, Biology, Biochemistry, Epitope, 03 medical and health sciences, chemistry.chemical_compound, C-type lectin, Neoplasms, Animals, Humans, Lectins, C-Type, Molecular Biology, Glycoproteins, Mannan-binding lectin, Inflammation, chemistry.chemical_classification, Models, Immunological, Bacterial Infections, General Medicine, Cell biology, 030104 developmental biology, Carbohydrate Sequence, Immune System Diseases, Mycoses, chemistry, Immunology, Molecular Medicine, Protein mannosylation, Glycoprotein, Mannose receptor
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b7d51ce4d001ad682520a004996dad1bTest
https://doi.org/10.1016/j.mam.2016.04.004Test