نتائج البحث

51

Investigating Major Recurring Campylobacter jejuni Lineages in Luxembourg Using Four Core or Whole Genome Sequencing Typing Schemes

المؤلفون: Morgane Nennig, Ann-Katrin Llarena, Malte Herold, Joël Mossong, Christian Penny, Serge Losch, Odile Tresse, Catherine Ragimbeau

المساهمون: Fonds National de la Recherche - FnR [sponsor], RFI Food for Tomorrow of Région Pays de la Loire - France [sponsor], Laboratoire National de Santé [research center], INRAE - Oniris (France) [research center]

المصدر: Frontiers in Cellular and Infection Microbiology, Vol 10 (2021)

مصطلحات موضوعية: 0301 basic medicine, Microbiology (medical), Microbiologie [F11] [Sciences du vivant], Lineage (evolution), 030106 microbiology, Immunology, Population, lcsh:QR1-502, typing schemes, core genome MLST, medicine.disease_cause, Microbiology, Campylobacter jejuni, lcsh:Microbiology, 03 medical and health sciences, clones, medicine, Microbiology [F11] [Life sciences], Typing, education, Genotyping, Whole genome sequencing, Genetics, whole genome sequencing, education.field_of_study, biology, Campylobacter, whole genome MLST, WGS typing scheme comparison, biology.organism_classification, 030104 developmental biology, Infectious Diseases, recurring genotypes, Multilocus sequence typing

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ee664bc9c1e4626e82be1f89d80c37b3Test
https://doi.org/10.3389/fcimb.2020.608020Test

52

Within-species contamination of bacterial whole-genome sequence data has a greater influence on clustering analyses than between-species contamination

المؤلفون: Errol Strain, James B. Pettengill, Arthur W. Pightling, Yu Wang, Hugh Rand

المصدر: Genome Biology, Vol 20, Iss 1, Pp 1-6 (2019)
Genome Biology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ddcb9d0450df29dfb9bda82231a436fbTest
https://doaj.org/article/2f919a58db87418dae5e7640757dc58aTest

53

STRAIN: an R package for multi-locus sequence typing from whole genome sequencing data

المؤلفون: Marco Romanelli, Mattia Dalsass, Marie-Cécile Mortier, Duccio Medini, Alessandro Brozzi, Christophe G. Lambert, Alessandro Muzzi, Margherita Bodini

المصدر: BMC Bioinformatics, Vol 20, Iss S9, Pp 1-8 (2019)
BMC Bioinformatics

مصطلحات موضوعية: Sequence assembly, Locus (genetics), Sequence type (ST), Computational biology, Biology, lcsh:Computer applications to medicine. Medical informatics, Biochemistry, Genome, 03 medical and health sciences, Structural Biology, Typing, Allele, Molecular Biology, lcsh:QH301-705.5, Alleles, 030304 developmental biology, Whole genome sequencing, 0303 health sciences, Whole Genome Sequencing, 030306 microbiology, Multi locus sequence type (MLST), Applied Mathematics, R package, Whole genome sequencing (WGS), Computer Science Applications, Bacterial Typing Techniques, lcsh:Biology (General), Multilocus sequence typing, lcsh:R858-859.7, DNA microarray, Software, Genome, Bacterial, Multilocus Sequence Typing

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8be397a2b4e38a3bfea489507fb0373dTest
http://link.springer.com/article/10.1186/s12859-019-2887-1Test

54

O-serogroups, virulence genes, antimicrobial susceptibility, and MLST genotypes of Shiga toxin-producing Escherichia coli from swine and cattle in Central China

المؤلفون: Chen Tan, Huanchun Chen, Lin Hua, Wan Liang, Xiaosong Li, Zhong Peng, Rui Guo, Zizhe Hu, Xiangru Wang, Xibiao Tang, Bin Wu

المصدر: BMC Veterinary Research, Vol 15, Iss 1, Pp 1-13 (2019)
BMC Veterinary Research

مصطلحات موضوعية: 0301 basic medicine, China, Tetracycline, Swine, animal diseases, 030106 microbiology, O-serogroups, Virulence, Biology, medicine.disease_cause, Serogroup, Antimicrobial susceptibility, Microbiology, 03 medical and health sciences, Feces, fluids and secretions, STX2, Shiga toxin-producing Escherichia coli, Ampicillin, Chlorocebus aethiops, Drug Resistance, Bacterial, medicine, Prevalence, Animals, Escherichia coli, Vero Cells, Escherichia coli Infections, lcsh:Veterinary medicine, General Veterinary, Shiga-Toxigenic Escherichia coli, Kanamycin, General Medicine, biochemical phenomena, metabolism, and nutrition, bacterial infections and mycoses, Intestines, 030104 developmental biology, Milk, MLST genotypes, Virulence genes, Multilocus sequence typing, bacteria, lcsh:SF600-1100, Cattle, Water Microbiology, medicine.drug, Research Article, Multilocus Sequence Typing

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::957bb103462a8581aba7d1fc6bcc19dbTest
https://doaj.org/article/ecf4bdf156c24bb1b4fc9242b8d102c9Test

55

Multiple sequence types responsible for healthcare-associated Acinetobacter baumannii dissemination in a single centre in Egypt

المؤلفون: Leena Al-Hassan, Hadir A. El-Mahallawy, Mai M. Zafer

المصدر: BMC Infectious Diseases, Vol 19, Iss 1, Pp 1-6 (2019)
BMC Infectious Diseases

مصطلحات موضوعية: 0301 basic medicine, Acinetobacter baumannii, medicine.medical_specialty, Genotype, Epidemiology, Carbapenem resistance, Health Personnel, 030106 microbiology, Population, Microbial Sensitivity Tests, Cancer Care Facilities, beta-Lactamases, Microbiology, lcsh:Infectious and parasitic diseases, 03 medical and health sciences, Medical microbiology, Drug Resistance, Multiple, Bacterial, polycyclic compounds, Humans, Medicine, Infection control, lcsh:RC109-216, Typing, education, QR0075, education.field_of_study, biology, business.industry, biochemical phenomena, metabolism, and nutrition, biology.organism_classification, bacterial infections and mycoses, Anti-Bacterial Agents, Bacterial Typing Techniques, Multiple drug resistance, 030104 developmental biology, Infectious Diseases, Carbapenems, Parasitology, Genes, Bacterial, Multilocus sequence typing, bacteria, Egypt, Female, business, Acinetobacter Infections, Multilocus Sequence Typing, Research Article, MLST

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99d1f227267ce13bc5216a297c8869daTest
http://link.springer.com/article/10.1186/s12879-019-4433-1Test

56

Core genome sequence analysis to characterize Salmonella enterica serovar Rissen ST469 from a swine production chain

المؤلفون: Phongsakorn Chuammitri, Nipa Chokesajjawatee, Phacharaporn Tadee, Pannita Santiyanont, Samuel K. Sheppard, Manu Deeudom, Pakpoom Tadee, Ben Pascoe, Teerarat Prasertsee, Prapas Patchanee, Aniroot Nuangmek

المصدر: Prasertsee, T, Chuammitri, P, Deeudom, M, Chokesajjawatee, N, Santiyanont, P, Tadee, P, Nuangmek, A, Tadee, P, Sheppard, S K, Pascoe, B & Patchanee, P 2019, ' Core genome sequence analysis to characterize Salmonella enterica serovar Rissen ST469 from a swine production chain ', International Journal of Food Microbiology, vol. 304, pp. 68-74 . https://doi.org/10.1016/j.ijfoodmicro.2019.05.022Test

مصطلحات موضوعية: Serotype, Salmonella, Genotype, Swine, Tetracycline, Food Contamination, Microbial Sensitivity Tests, Antimicrobial resistance, medicine.disease_cause, Microbiology, Foodborne Diseases, 03 medical and health sciences, Antibiotic resistance, Drug Resistance, Multiple, Bacterial, Ampicillin, medicine, Animals, Humans, Pig production, 030304 developmental biology, Swine Diseases, Salmonella serovar Rissen, Salmonella Infections, Animal, 0303 health sciences, biology, 030306 microbiology, Salmonella enterica, General Medicine, Thailand, biology.organism_classification, Core genome MLST, Anti-Bacterial Agents, Red Meat, Phenotype, Whole genome sequencing, Multilocus sequence typing, Sequence Analysis, Multilocus Sequence Typing, Food Science, medicine.drug