Comparative proteome analysis reveals proteins involved in salt adaptation inPhotobacterium damselaesubsp.piscicida

التفاصيل البيبلوغرافية
العنوان: Comparative proteome analysis reveals proteins involved in salt adaptation inPhotobacterium damselaesubsp.piscicida
المؤلفون: Wei-Chen Tsai, Tsun-Yung Kuo, Min-Yuan Chuang, Wei-Jung Chen, Han-Min Chen
المصدر: Journal of Basic Microbiology. 56:1234-1243
بيانات النشر: Wiley, 2016.
سنة النشر: 2016
مصطلحات موضوعية: 0301 basic medicine, Gel electrophoresis, chemistry.chemical_classification, biology, 030106 microbiology, General Medicine, Proteomics, Photobacterium, biology.organism_classification, Applied Microbiology and Biotechnology, Microbiology, Amino acid, 03 medical and health sciences, 030104 developmental biology, Photobacterium damselae, chemistry, Biochemistry, Proteome, Inner membrane, Bacterial outer membrane
الوصف: Proteomic approaches were applied to investigate whether Photobacterium damselae subsp. piscicida (Phdp) can directly sense and respond to growth conditions under different salinities, 0.85% and 3.5% NaCl concentrations, mimicking the osmotic conditions in host and marine water bodies, respectively. Proteins significantly altered were analyzed by two-dimensional gel electrophoresis (2-DE), liquid chromatography-electrospray ionization-quadrupole-time-of-flight tandem mass spectrometry (LC-ESI-Q-TOF MS/MS) and bioinformatics analysis, thus resulting in 16 outer membrane proteins (OMPs), 12 inner membrane proteins (IMPs), and 20 cytoplasmic proteins (CPs). Quantitative real-time PCR was also applied to monitor the mRNA expression level of these target proteins. Cluster of orthologous groups of protein (COG) analysis revealed that when shifting from 3.5% to 0.85% salinity, the majority of the up-regulated proteins were involved in posttranslational modification, protein turnover, and chaperones, while the down-regulated proteins were mainly related to energy production and conversion, compatible solutes (carbohydrates, amino acids and their derivatives) biogenesis and transport. Differentially expressed proteins identified in the current study could be used to elucidate the salt adaptation mechanisms of Phdp during their transition between host cells and the marine habitats.
تدمد: 0233-111X
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_________::3317df252679f12b1d34675db99cb7e6Test
https://doi.org/10.1002/jobm.201600091Test
حقوق: CLOSED
رقم الانضمام: edsair.doi...........3317df252679f12b1d34675db99cb7e6
قاعدة البيانات: OpenAIRE