Integrated analysis of tRNA-derived small RNAs in proliferative human aortic smooth muscle cells

التفاصيل البيبلوغرافية
العنوان: Integrated analysis of tRNA-derived small RNAs in proliferative human aortic smooth muscle cells
المؤلفون: Jian-Zhi Zhao, Qi-Yao Li, Jia-Jie Lin, Li-Yun Yang, Mei-Yang Du, Yu Wang, Ke-Xin Liu, Ze-An Jiang, Huan-Huan Li, Si-Fan Wang, Bo Sun, Shi-Qing Mu, Bin Li, Kun Liu, Miao Gong, Shao-Guang Sun
المصدر: Cellularmolecular biology letters. 27(1)
سنة النشر: 2022
مصطلحات موضوعية: MicroRNAs, RNA, Transfer, Myocytes, Smooth Muscle, Humans, Cell Biology, RNA, Messenger, Molecular Biology, Biochemistry, 3' Untranslated Regions, Aorta
الوصف: Background Abnormal proliferation of vascular smooth muscle cells (VSMCs) contributes to vascular remodeling diseases. Recently, it has been discovered that tRNA-derived small RNAs (tsRNAs), a new type of noncoding RNAs, are related to the proliferation and migration of VSMCs. tsRNAs regulate target gene expression through miRNA-like functions. This study aims to explore the potential of tsRNAs in human aortic smooth muscle cell (HASMC) proliferation. Methods High-throughput sequencing was performed to analyze the tsRNA expression profile of proliferative and quiescent HASMCs. Quantitative real-time polymerase chain reaction (qRT-PCR) was performed to validate the sequence results and subcellular distribution of AS-tDR-001370, AS-tDR-000067, AS-tDR-009512, and AS-tDR-000076. Based on the microRNA-like functions of tsRNAs, we predicted target promoters and mRNAs and constructed tsRNA–promoter and tsRNA–mRNA interaction networks. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed to reveal the function of target genes. EdU incorporation assay, Western blot, and dual-luciferase reporter gene assay were utilized to detect the effects of tsRNAs on HASMC proliferation. Results Compared with quiescent HASMCs, there were 1838 differentially expressed tsRNAs in proliferative HASMCs, including 887 with increased expression (fold change > 2, p p Conclusions During HASMC proliferation, the expression levels of many tsRNAs are altered. AS-tDR-000067 and AS-tDR-000076 act as new factors promoting VSMC proliferation.
تدمد: 1689-1392
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a056887d9eb22068fe99b06234d09a81Test
https://pubmed.ncbi.nlm.nih.gov/35705912Test
حقوق: OPEN
رقم الانضمام: edsair.doi.dedup.....a056887d9eb22068fe99b06234d09a81
قاعدة البيانات: OpenAIRE