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المؤلفون: Amber L. Johns, Ian Fore, Juha Törnroos, Melissa Haendel, Bimal Chaudhari, J. Patrick Woolley, Brian Walsh, Susan Fairley, Jonathan A. Tedds, Jessica Vamathevan, Martin Kuba, Clara L. Gaff, Ksenia Zaytseva, Sabine Oesterle, David Bujold, Sarion R. Bowers, Alexander Kanitz, Jordi Rambla, Anthony J. Brookes, Alice L. Mann, Gregory A. Rushton, Paul Flicek, Seik-Soon Khor, Khalid A. Fakhro, Aina Jene, Miro Cupak, Moran N. Cabili, Emilio Palumbo, Nathan C. Sheffield, Vivian Ota Wang, James K. Bonfield, Julius O.B. Jacobsen, Michael M. Hoffman, Neerjah Skantharajah, Ewan Birney, Rasko Leinonen, Anna Middleton, Anneke M. Lucassen, Ania Niewielska, Angela Page, Jeffrey Niu, Alastair A. Thomson, Elena M. Ghanaim, Albert V. Smith, Megan Doerr, Lena I. Dolman, Arcadi Navarro, Ada Hamosh, Sean Upchurch, Michael Baudis, Jerome Kelleher, Marc Fiume, Mikael Linden, Roderic Guigó, Orion J. Buske, Tristan H. Nelson, Kyle Ellrott, Lauren A. Fromont, Alex H. Wagner, Alexander Senf, Tommi Nyrönen, Michele Mattioni, David Haussler, Alejandro Metke-Jimenez, Francis Jeanson, Mélanie Courtot, David Hansen, Matthew H. Brush, Helen Parkinson, Peter Goodhand, Lindsay Smith, Jonathan Fuerth, Stephanie Li, Tim Beck, Debyani Chakravarty, Kristina Kekesi-Lafrance, Giselle Kerry, James A. Eddy, Torsten Schwede, Jaime M. Guidry Auvil, Xianglin Liu, Soichi Ogishima, Fiona Cunningham, Oliver Hofmann, Dean Hartley, Amy Nisselle, Katsushi Tokunaga, Alfonso Valencia, Hidewaki Nakagawa, Kurt W. Rodarmer, Lawrence J. Babb, Heidi J. Sofia, David Glazer, Angel Pizarro, Ammar Husami, Gil Alterovitz, Serena Scollen, J. Michael Cherry, Helen V. Firth, Zornitza Stark, Monica C. Munoz-Torres, Daniel L Cameron, Robert R. Freimuth, Manuel Rueda, Stephanie O.M. Dyke, Makoto Suematsu, Christina K. Yung, Rosalyn S. Ryan, Chisato Yamasaki, Michael S. Fitzsimons, Amanda B. Spurdle, Renee A. Rider, Karen Eilbeck, Ashley E. Hobb, Roman Valls Guimera, Calvin W. L. Ho, Robert L. Davies, Maxmillian P. Barkley, Malachi Griffith, Rishi Nag, Javier Lopez, Jacob Shujui Hsu, Isuru Udara Liyanage, Petr Holub, Dylan Spalding, Reece K. Hart, Barbara J. Wold, Fruzsina Molnár-Gábor, Sarah E. Hunt, Augusto Rendon, Danielle Denisko, Dipayan Gupta, Obi L. Griffith, Robert J. Carroll, Patrick Tan, Craig Voisin, Saumya Shekhar Jamuar, Mallory A. Freeberg, Michael Brudno, Andreas Prlic, Kenjiro Kosaki, Shu Hui Chen, Edward S. Dove, Tony Burdett, Anthony A. Philippakis, Richard Milne, Bartha Maria Knoppers, Kathryn North, David Torrents, Eva C. Winkler, Marc S. Williams, Melissa A. Konopko, Rachele M. Hendricks-Sturrup, Brian O'Connor, Grant M. Wood, Robert L. Grossman, Timothy L. Tickle, Michael F. Lin, Laura Lyman Rodriguez, Weiniu Gan, Laura A.D. Paglione, Justina Chung, Thomas M. Keane, Susan E. Wallace, Lyndon J. Zass, Heidi L. Rehm, Kazuto Kato, Alexander Bernier, Nicola Mulder, Jamal Nasir, Yann Joly, Junjun Zhang, Adrian Thorogood, Lincoln Stein, Guillaume Bourque, L. Jonathan Dursi, Tudor Groza, Jean-Pierre Hubaux, Coby Viner, Helen Schuilenburg, Sergi Beltran, Michael J.S. Beauvais, Hayley L. Clissold, Elizabeth L. Janes, Jacques S. Beckmann, Michael Lukowski, Melissa S. Cline, John F. Marshall, Alan F. Rubin, Tiffany Boughtwood, Peter N. Robinson, Robert C. Green, Robert Cook-Deegan, Esmeralda Casas-Silva, Jeremy Adams, Steven J.M. Jones, Gary I. Saunders, Danya F. Vears, Jonathan Lawson, Andrew D. Yates, David Bernick, Susheel Varma
المساهمون: Middleton, Anna [0000-0003-3103-8098], Milne, Richard [0000-0002-8770-2384], Apollo - University of Cambridge Repository, Abigail Wexner Research Institute, Academy of Finland, Medical Research Future Fund, BioBank Japan, Canada Foundation for Innovation, Canadian Institutes of Health Research, European Commission, German Research Foundation, Genome Canada, Google, Howard Hughes Medical Institute, Instituto de Salud Carlos III, Japan Agency for Medical Research and Development, Mayo Clinic, Fundación 'la Caixa', Ministère de l'Économie et de l'Innovation (Québec), Monarch Initiative, National Human Genome Research Institute (US), National University of Singapore, Agency for Science, Technology and Research A*STAR (Singapore), National Health and Medical Research Council (Australia), National Institutes of Health (US), National Institute of General Medical Sciences (US), Swiss Institute of Bioinformatics, State Secretariat for Education, Research and Innovation (Switzerland), Terry Fox Research Institute, Canada Research Chairs, European Molecular Biology Laboratory, Ministry of Research, Innovation and Science (Ontario), Ontario Genomics Institute, Natural Sciences and Engineering Research Council of Canada, Wellcome Trust, National Taiwan University
المصدر: Cell Genonics
Rehm, H L, Page, A J H, Smith, L, Adams, J B, Alterovitz, G, Babb, L J, Barkley, M P, Baudis, M, Beauvais, M J S, Beck, T, Beckmann, J S, Beltran, S, Bernick, D, Bernier, A, Bonfield, J K, Boughtwood, T F, Bourque, G, Bowers, S R, Brookes, A J, Brudno, M, Brush, M H, Bujold, D, Burdett, T, Buske, O J, Cabili, M N, Cameron, D L, Carroll, R J, Casas-Silva, E, Chakravarty, D, Chaudhari, B P, Chen, S H, Cherry, J M, Chung, J, Cline, M, Clissold, H L, Cook-Deegan, R M, Courtot, M, Cunningham, F, Cupak, M, Davies, R M, Denisko, D, Doerr, M J, Dolman, L I, Dove, E S, Dursi, L J, Dyke, S O M, Eddy, J A, Eilbeck, K, Ellrott, K P, Fairley, S, Fakhro, K A, Firth, H V, Fitzsimons, M S, Fiume, M, Flicek, P, Fore, I M, Freeberg, M A, Freimuth, R R, Fromont, L A, Fuerth, J, Gaff, C L, Gan, W, Ghanaim, E M, Glazer, D, Green, R C, Griffith, M, Griffith, O L, Grossman, R L, Groza, T, Guidry Auvil, J M, Guigó, R, Gupta, D, Haendel, M A, Hamosh, A, Hansen, D P, Hart, R K, Hartley, D M, Haussler, D, Hendricks-Sturrup, R M, Ho, C W L, Hobb, A E, Hoffmann, M M, Hoffman, O M, Holub, P, Hsu, J S, Hubaux, J-P, Hunt, S E, Husami, A, Jacobsen, J O, Jamuar, S S, Janes, E L, Jeanson, F, Jené, A, Johns, A L, Joly, Y, Jones, S J M, Kanitz, A, Kato, K, Keane, T M, Kekesi-Lafrance, K, Kelleher, J, Kerry, G, Khor, S-S, Knoppers, B M, Konopko, M A, Kosaki, K, Kuba, M, Lawson, J, Leinonen, R, Li, S, Lin, M F, Linden, M, Liu, X, Liyanage, I U, Lopez, J, Lucassen, A M, Lukowski, M, Mann, A L, Marshall, J, Mattioni, M, Metke-Jimenez, A, Middleton, A, Milne, R J, Molnár-Gábor, F, Mulder, N, Munoz-Torres, M C, Nag, R, Nakagawa, H, Nasir, J, Navarro, A, Nelson, T H, Niewielska, A, Nisselle, A, Niu, J, Nyrönen, T H, O'Connor, B D, Oesterle, S, Ogishima, S, Wang, V O, Paglione, L A D, Palumbo, E, Parkinson, H E, Philippakis, A A, Pizarro, A D, Prlic, A, Rambla, J, Rendon, A, Rider, R A, Robinson, P N, Rodarmer, K W, Rodriguez, L L, Rubin, A F, Rueda, M, Rushton, G A, Ryan, R S, Saunders, G I, Schuilenburg, H, Schwede, T, Scollen, S, Senf, A, Sheffield, N C, Skantharajah, N, Smith, A V, Sofia, H J, Spalding, D, Spurdle, A B, Stark, Z, Stein, L D, Suematsu, M, Tan, P, Tedds, J A, Thomson, A A, Thorogood, A, Tickle, T L, Tokunaga, K, Törnroos, J, Torrents, D, Upchurch, S, Valencia, A, Guimera, R V, Varmathevan, J, Varma, S, Vears, D F, Viner, C, Voisin, C, Wagner, A H, Wallace, S E, Walsh, B P, Williams, M S, Winkler, E C, Wold, B J, Wood, G M, Woolley, J P, Yamasaki, C, Yates, A D, Yung, C K, Zass, L J, Zaytseva, K, Zhang, J, Goodhand, P, North, K & Birney, E 2021, ' GA4GH : International policies and standards for data sharing across genomic research and healthcare ', Cell Genomics, vol. 1, no. 2, 100029 . https://doi.org/10.1016/j.xgen.2021.100029Test
Cell genomics
Digital.CSIC. Repositorio Institucional del CSIC
instname
Cell genomics, vol. 1, no. 2, pp. 100029مصطلحات موضوعية: Standards, Knowledge management, data sharing, precision medicine, Interoperability, Technical standard, data federation, Article, 3105 Genetics, 03 medical and health sciences, 0302 clinical medicine, data access, learning health system, Clinical Research, Health care, genomics, Genetics, Data federation, Data access, 030304 developmental biology, 0303 health sciences, business.industry, Precision medicine, Human Genome, Learning health system, 3 Good Health and Well Being, Bioethics, Genomics, Health Services, 3. Good health, Data sharing, Data aggregator, Policy, 030220 oncology & carcinogenesis, FOS: Biological sciences, standards, Business, Generic health relevance, bioethics, policy, 31 Biological Sciences
وصف الملف: application/pdf; text
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c734eb108aca696729e07ad1bb534379Test
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المؤلفون: Manuel Rueda, Ruben Abagyan
مصطلحات موضوعية: 0303 health sciences, Computer science, business.industry, Biological activity, Machine learning, computer.software_genre, 01 natural sciences, Small molecule, 0104 chemical sciences, 010404 medicinal & biomolecular chemistry, 03 medical and health sciences, Docking (molecular), DOCK, Artificial intelligence, business, computer, 030304 developmental biology
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::870a5873037e1b6aa52934c01d430541Test
https://doi.org/10.1101/039446Test -
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المؤلفون: Victor Solovyev, Umesh Ghoshdastider, Patrick Sexton, Andrei Lomize, Nathan Hall, Vladimir Yarov-Yarovoy, Stefano Costanzi, William Church, Nikolay Dokholyan, Robert Mach, David Chalmers, Srinivas Ramachandran, Vsevolod Katritch, Joseph Rebehmed, Chris De Graaf, David Reichert, Henri Xhaard, Slawomir Filipek, John Simms, Supriyo Bhattacharya, Jens Carlsson, Bartosz Trzaskowski, I.J.P. De Esch, Lei Shi, Dorota Latek, Woody Sherman, Liliana Halip, Manuel Rueda, Irina Kufareva, Elizabeth Yuriev, Jana Selent, Denise Wootten
المساهمون: Medicinal chemistry, AIMMS
المصدر: Structure with Folding & Design, 19, 1108-26
Kufareva, I, Rueda, M, Katritch, V, Roumen, L, de Esch, I J P, Leurs, R, de Graaf, C, Stevens, R C & Abagyan, R 2011, ' Status of GPCR Modeling and Docking as Reflected by Community-wide GPCR Dock 2010 Assessment ', Structure, vol. 19, pp. 1108-1126 . https://doi.org/10.1016/j.str.2011.05.012Test
Structure, 19, 1108-1126. Cell Press
Structure with Folding & Design, 19, 8, pp. 1108-26مصطلحات موضوعية: Chemical and physical biology [NCMLS 7], Models, Molecular, Quantitative structure–activity relationship, Receptors, CXCR4, Genetics and epigenetic pathways of disease [NCMLS 6], Molecular model, Molecular Sequence Data, Computational biology, Biology, Crystallography, X-Ray, 01 natural sciences, Article, Receptors, G-Protein-Coupled, 03 medical and health sciences, Chemokine receptor, Structural Biology, DOCK, Salicylamides, Humans, Computer Simulation, Homology modeling, Amino Acid Sequence, Molecular Biology, 030304 developmental biology, G protein-coupled receptor, 0303 health sciences, Binding Sites, 010405 organic chemistry, Receptors, Dopamine D3, Thiourea, Small molecule, Peptide Fragments, 0104 chemical sciences, Biochemistry, Docking (molecular), Protein Binding
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5007a5be69b7ad8522411e93b367055fTest
https://europepmc.org/articles/PMC3154726Test/ -
4MoDEL (Molecular Dynamics Extended Library): a database of atomistic molecular dynamics trajectories
المؤلفون: Tim Meyer, Marco D'Abramo, Adam Hospital, Manuel Rueda, Carles Ferrer-Costa, Alberto Pérez, Oliver Carrillo, Jordi Camps, Carles Fenollosa, Dmitry Repchevsky, Josep Lluis Gelpí, Modesto Orozco
المصدر: Structure
مصطلحات موضوعية: Models, Molecular, Web server, Computer science, Protein Conformation, Protein Data Bank (RCSB PDB), Molecular Dynamics Simulation, computer.software_genre, 01 natural sciences, 03 medical and health sciences, Molecular dynamics, Protein structure, Structural Biology, 0103 physical sciences, Data Mining, Databases, Protein, Molecular Biology, 030304 developmental biology, 0303 health sciences, Internet, 010304 chemical physics, Database, computer.file_format, Protein Data Bank, Data warehouse, Solvents, computer, Software
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a117d2b288181113afe7c808b5b5dd24Test
https://pubmed.ncbi.nlm.nih.gov/21070939Test -
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المؤلفون: Modesto Orozco, Javier A. Velázquez-Muriel, Manuel Rueda, Isabel Cuesta, Alberto Pascual-Montano, José María Carazo
المصدر: BMC Structural Biology, Vol 9, Iss 1, p 6 (2009)
BMC Structural Biologyمصطلحات موضوعية: Models, Molecular, Protein domain, Biology, Plateau (mathematics), 01 natural sciences, 03 medical and health sciences, Molecular dynamics, Protein structure, Sequence Analysis, Protein, Structural Biology, 0103 physical sciences, Computer Simulation, Amino Acid Sequence, Statistical physics, lcsh:QH301-705.5, 030304 developmental biology, Flexibility (engineering), 0303 health sciences, Sequence Homology, Amino Acid, 010304 chemical physics, Proteins, Function (mathematics), Protein structure prediction, Protein Structure, Tertiary, Crystallography, Models, Chemical, lcsh:Biology (General), Protein folding, Research Article
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::04ce433510a91f9d60bc4f945f693dd3Test
http://www.biomedcentral.com/1472-6807/9/6Test -
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المؤلفون: Ruben Abagyan, Manuel Rueda, Eugene Raush, Vsevolod Katritch
المصدر: Bioinformatics. 26:2784-2785
مصطلحات موضوعية: Statistics and Probability, Web server, Theoretical computer science, Protein Conformation, Computer science, 030303 biophysics, Ligands, computer.software_genre, Biochemistry, Web tool, Computational science, 03 medical and health sciences, Software, Text mining, Computer Graphics, Molecular symmetry, Graphics, Databases, Protein, Molecular Biology, 030304 developmental biology, Internet, 0303 health sciences, business.industry, Proteins, 3. Good health, Computer Science Applications, Applications Note, Computational Mathematics, Identification (information), Computational Theory and Mathematics, business, computer, Protein ligand
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3f0ea6a936d6235bb71791d32f39456Test
https://doi.org/10.1093/bioinformatics/btq504Test -
7BioSuper: A web tool for the superimposition of biomolecules and assemblies with rotational symmetry
المؤلفون: Modesto Orozco, Manuel Rueda, Ruben Abagyan, Maxim Totrov
المساهمون: Universitat de Barcelona
المصدر: Recercat. Dipósit de la Recerca de Catalunya
instname
BMC Structural Biology
Rueda, Manuel; Orozco, Modesto; Totrov, Maxim; & Abagyan, Ruben. (2013). BioSuper: A web tool for the superimposition of biomolecules and assemblies with rotational symmetry. BMC Structural Biology, 13(1), 32. doi: http://dx.doi.org/10.1186/1472-6807-13-32Test. Retrieved from: http://www.escholarship.org/uc/item/9dh1d8z8Test
Dipòsit Digital de la UB
Universidad de Barcelonaمصطلحات موضوعية: Models, Molecular, Web server, Computer science, Protein Conformation, Rotational symmetry, computer.software_genre, Protein Structure, Secondary, Biologia computacional, Computational biology, 03 medical and health sciences, User-Computer Interface, Biomolècules, Structural Biology, Computer Graphics, Superimposition, Databases, Protein, Interactive visualization, Root-mean-square deviation, 030304 developmental biology, Oligòmers, Biomolecules, 0303 health sciences, Internet, 030302 biochemistry & molecular biology, Computational Biology, Proteins, computer.file_format, Protein Data Bank, Protein Structure, Tertiary, Crystallography, Oligomers, Symmetry (geometry), Protein Multimerization, computer, Algorithm, Proteïnes, Software, Generator (mathematics)
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a603f8e201e9c75a59fbd2abc5fc274bTest
http://hdl.handle.net/2445/54510Test -
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المؤلفون: Tim Meyer, Josep Lluís Gelpí, Manuel Rueda, Modesto Orozco, Alberto Perez, Michela Candotti, Carles Ferrer-Costa
المساهمون: Universitat de Barcelona
المصدر: Recercat. Dipósit de la Recerca de Catalunya
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PLoS Computational Biology, Vol 9, Iss 12, p e1003393 (2013)
PLoS Computational Biology
Dipòsit Digital de la UB
Universidad de Barcelonaمصطلحات موضوعية: Proteome, Globular protein, Protein domain, 010402 general chemistry, 01 natural sciences, Protein–protein interaction, 03 medical and health sciences, Cellular and Molecular Neuroscience, chemistry.chemical_compound, Molecular dynamics, Protein structure, Genetics, Urea, Desnaturalització de proteïnes, Molecular Biology, Protein secondary structure, lcsh:QH301-705.5, Ecology, Evolution, Behavior and Systematics, 030304 developmental biology, Protein Unfolding, chemistry.chemical_classification, 0303 health sciences, Ecology, Protein denaturation, 0104 chemical sciences, Solvation shell, Computational Theory and Mathematics, chemistry, Biochemistry, lcsh:Biology (General), Modeling and Simulation, biological sciences, Biophysics, Research Article
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43612df05d30536ff666b6208c642dfeTest
http://hdl.handle.net/2445/147783Test