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المؤلفون: Cheng Chang, Yingxing Li, Mengnan Wang, Wen Zhang, Yunping Zhu, Miao Yu, Mingfei Han, Xiao-Ming Yang, Chunyan Tian, Xian Liu, Wenjing Bu, Fuchu He
المصدر: Nucleic Acids Research
مصطلحات موضوعية: 0301 basic medicine, AcademicSubjects/SCI00010, Gene regulatory network, Repressor, RNA-Seq, Computational biology, Biology, Biological pathway, Mice, 03 medical and health sciences, 0302 clinical medicine, Databases, Genetic, Gene expression, Genetics, Animals, Gene Regulatory Networks, KEGG, Transcription factor, Gene, Narese/7, MicroRNAs, Narese/24, 030104 developmental biology, 030220 oncology & carcinogenesis, Methods Online, Transcriptome, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cdc9d38d099b42f82fb5151500a125b5Test
https://doi.org/10.1093/nar/gkab629Test -
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المؤلفون: Frédéric Bottausci, Stephanie Porte, Sophie Gerbaud, Nathalie Picollet-D'hahan, Xavier Gidrol, Bastien Laperrousaz, Virginie Hourtane, Frédérique Kermarrec, Ville Härmä
المساهمون: Biomicrotechnologie et génomique fonctionnelle (BIOMICS), Laboratoire de Biologie à Grande Échelle (BGE - UMR S1038), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Commissariat à l'énergie atomique et aux énergies alternatives - Laboratoire d'Electronique et de Technologie de l'Information (CEA-LETI), Direction de Recherche Technologique (CEA) (DRT (CEA)), CEA [Plan de couplage DSV-DRT] Grenoble Alps Metropole (Proof of Concept program of Canceropole CLARA (PROscan3D project)), ANR-11-NANB-0002,FACSBIOMARKER,Identification et validation de biomarqueurs du cancer de la prostate par ARN interférence à haut débit couplée au FACS(2011), Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), Leriche, Marianne, Nanobiologies - Identification et validation de biomarqueurs du cancer de la prostate par ARN interférence à haut débit couplée au FACS - - FACSBIOMARKER2011 - ANR-11-NANB-0002 - NANB - VALID
المصدر: Nucleic Acids Research
Nucleic Acids Research, 2018, 46 (12), pp.e70-e70. ⟨10.1093/nar/gky030⟩
Nucleic Acids Research, Oxford University Press, 2018, 46 (12), pp.e70-e70. ⟨10.1093/nar/gky030⟩مصطلحات موضوعية: 0301 basic medicine, Male, [SPI] Engineering Sciences [physics], Transgene, Biology, Transfection, Cell Line, Extracellular matrix, 03 medical and health sciences, [SPI]Engineering Sciences [physics], 0302 clinical medicine, Cell Line, Tumor, Lab-On-A-Chip Devices, Spheroids, Cellular, Genetics, Organoid, Humans, Breast, RNA, Small Interfering, Matrigel, Electroporation, Tumor Suppressor Proteins, Spheroid, PTEN Phosphohydrolase, Prostate, Microspheres, Cell biology, Organoids, Drug Combinations, 030104 developmental biology, 030220 oncology & carcinogenesis, Methods Online, Female, Proteoglycans, RNA Interference, Collagen, Laminin, Genetic screen, Transcription Factors
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b98fd939bcc875d31f56e9e4ea696028Test
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المؤلفون: Yulia A. Medvedeva, Xin Gao, Magbubah Essack, Haitham Ashoor, Boris R. Jankovic, Olaa Amin Motwalli, Romina Oliva, Abdullah M. Khamis, Vladimir B. Bajic
المصدر: Nucleic Acids Research
مصطلحات موضوعية: 0301 basic medicine, Chromatin Immunoprecipitation, Binding Sites, Small number, Inference, Computational biology, DNA, Sequence Analysis, DNA, Biology, Web tool, DNA binding site, Reduction (complexity), Machine Learning, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, Genetics, False positive paradox, Methods Online, Humans, Position-Specific Scoring Matrices, TRANSFAC, 030217 neurology & neurosurgery, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c57eb2be3ee0711997e784615b3f0b08Test
http://hdl.handle.net/11367/68877Test -
4
المصدر: NUCLEIC ACIDS RESEARCH
Nucleic Acids Researchمصطلحات موضوعية: COMPARATIVE GENOMICS, EXPRESSION, False discovery rate, 0106 biological sciences, 0301 basic medicine, DATABASE, Arabidopsis, Regulator, Gene regulatory network, Computational biology, computer.software_genre, 01 natural sciences, 03 medical and health sciences, Gene Expression Regulation, Plant, ELEMENTS, Genetics, COEXPRESSION NETWORKS, Gene Regulatory Networks, Protein Interaction Maps, Transcription factor, Gene, PLANT GENE, Regulator gene, TOOLS, Regulation of gene expression, Comparative genomics, Binding Sites, THALIANA, IDENTIFICATION, biology, Arabidopsis Proteins, Computational Biology, Biology and Life Sciences, DNA, biology.organism_classification, 030104 developmental biology, Methods Online, Data mining, Candidate Disease Gene, computer, Algorithms, PROMOTER SEQUENCES, Protein Binding, Transcription Factors, 010606 plant biology & botany
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43249ab284b6630b45c99603b5109c4eTest
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المؤلفون: Chongzhi Zang, Ninad M. Walavalkar, Warren D. Anderson, Michael J. Guertin, André L. Martins
المصدر: Nucleic Acids Research
مصطلحات موضوعية: 0301 basic medicine, Sequence analysis, genetic processes, Genomics, Computational biology, Biology, Genome, DNA sequencing, 03 medical and health sciences, chemistry.chemical_compound, Bias, RNA polymerase, Genetics, natural sciences, Transcription factor, Sequence (medicine), Deoxyribonucleases, Computational Biology, High-Throughput Nucleotide Sequencing, Reproducibility of Results, DNA, DNA-Directed RNA Polymerases, 030104 developmental biology, chemistry, Nucleic acid, Methods Online, Identification (biology), Algorithms, Protein Binding, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bc012bb95e0d0a3aa8fadbc900d5b2beTest
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المؤلفون: Takuma Irie, Tetsushi Yada, Yutaka Suzuki, Ying Liu
المصدر: Nucleic Acids Research
مصطلحات موضوعية: 0301 basic medicine, Transcription, Genetic, Sequence analysis, Biology, 03 medical and health sciences, Transcription (biology), Genes, Reporter, Genetics, Humans, Promoter Regions, Genetic, Gene, Transcription factor, Reporter gene, Multivariate adaptive regression splines, Binding Sites, Computational Biology, High-Throughput Nucleotide Sequencing, Promoter, DNA, Sequence Analysis, DNA, DNA binding site, 030104 developmental biology, HEK293 Cells, Regression Analysis, Methods Online, Databases, Nucleic Acid, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fa8590c0643f67f6d887fe8f6b69f905Test
https://pubmed.ncbi.nlm.nih.gov/28531296Test -
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المؤلفون: Tatiana S. Karpova, James G. McNally, David A. Ball, Tatsuya Morisaki, Gunjan D. Mehta, Davide Mazza, Florian Mueller, Ronit Salomon-Kent
المساهمون: National Cancer Institute [Bethesda] (NCI-NIH), National Institutes of Health [Bethesda] (NIH), San Raffaele Scientific Institute, Vita-Salute San Raffaele University and Center for Translational Genomics and Bioinformatics, Colorado State University [Fort Collins] (CSU), Imagerie et Modélisation, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Institute for Soft Matter and Functional Materials [Berlin], Helmholtz-Zentrum Berlin für Materialien und Energie GmbH (HZB), Intramural Research Program of National Institutes of Health (NIH), National Cancer Institute (NCI) and Center for Cancer Research (CCR). Funding for open access charge: Intramural Research Program of National Institutes of Health (NIH)., The authors would like to thank Dr Luke D. Lavis and Dr Jonatan B. Grimm (Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA) for JF HaloTag ligands. The authors acknowledge Euroscarf for providing pUG6 plasmid., Ball, Da, Mehta, Gd, Salomon-Kent, R, Mazza, D, Morisaki, T, Mueller, F, Mcnally, Jg, Karpova, Ts, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
المصدر: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2016, 44 (21), pp.e160. ⟨10.1093/nar/gkw744⟩
Europe PubMed Central
Nucleic Acids Research, 2016, 44 (21), pp.e160. ⟨10.1093/nar/gkw744⟩مصطلحات موضوعية: 0301 basic medicine, Time Factors, [SDV]Life Sciences [q-bio], dna, MESH: Heat-Shock Proteins, Genome, Histones, chemistry.chemical_compound, MESH: Saccharomyces cerevisiae Proteins, Heat-Shock Proteins, transcription factor, Genetics, MESH: Histones, MESH: Transcription Factors, MESH: Saccharomyces cerevisiae, Molecular Imaging, Chromatin, DNA-Binding Proteins, Methods Online, Inhouse research on structure dynamics and function of matter, Saccharomyces cerevisiae Proteins, Fluorophore, Recombinant Fusion Proteins, Saccharomyces cerevisiae, yeasts, Computational biology, Biology, MESH: Chromatin, 03 medical and health sciences, MESH: Recombinant Fusion Proteins, Transcription factor, molecule, MESH: Molecular Imaging, MESH: Metallothionein, MESH: Time Factors, biology.organism_classification, Yeast, 030104 developmental biology, chemistry, chromatin, Metallothionein, blinking, DNA, Function (biology), MESH: DNA-Binding Proteins, Transcription Factors
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c352f77bbbd373ef29b324718735056eTest
https://hal-pasteur.archives-ouvertes.fr/pasteur-01622680/documentTest -
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المؤلفون: Ralf Eggeling
المساهمون: Department of Computer Science
المصدر: Nucleic Acids Research
مصطلحات موضوعية: 0301 basic medicine, Chromatin Immunoprecipitation, Amino Acid Motifs, Datasets as Topic, Sequence alignment, Computational biology, Biology, Sequence motifs, ChIP-Seq, 03 medical and health sciences, Genetics, Position-Specific Scoring Matrices, 112 Statistics and probability, Binding Sites, Probabilistic logic, PROTEIN-DNA INTERACTIONS, DNA, 113 Computer and information sciences, Position weight matrix, DNA binding site, Benchmarking, 030104 developmental biology, Models, Chemical, 1182 Biochemistry, cell and molecular biology, Methods Online, Motif (music), Sequence motif, Sequence Alignment, Software, Protein Binding, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dbed72604eb09a0a6e7e74cca0e852b5Test
http://europepmc.org/articles/PMC6237759Test -
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المؤلفون: Punto Bawono, Jaap Heringa, Judith Schütte, Stefan H. Lelieveld, Berthold Göttgens, Maurits J. J. Dijkstra, Nicola Bonzanni, Sarah Kinston
المساهمون: Bioinformatics, AIMMS, Theoretical Computer Science, Integrative Bioinformatics, Bonzanni, Nicola [0000-0003-4412-880X], Apollo - University of Cambridge Repository
المصدر: Nucleic Acids Research, 44(8). Oxford University Press
Lelieveld, S H, Schütte, J, Dijkstra, M J J, Bawono, P, Kinston, S J, Göttgens, B, Heringa, J & Bonzanni, N 2016, ' ConBind : Motif-aware cross-species alignment for the identification of functional transcription factor binding sites ', Nucleic Acids Research, vol. 44, no. 8, pp. e72 . https://doi.org/10.1093/nar/gkv1518Test
Nucleic Acids Researchمصطلحات موضوعية: 0301 basic medicine, Medizin, Sequence alignment, Computational biology, Biology, DNA-binding protein, DNA sequencing, 03 medical and health sciences, Genetics, Animals, Humans, Promoter Regions, Genetic, Enhancer, Transcription factor, Binding Sites, Multiple sequence alignment, Base Sequence, Computational Biology, Sequence Analysis, DNA, DNA-Binding Proteins, DNA binding site, Enhancer Elements, Genetic, 030104 developmental biology, Gene Expression Regulation, Regulatory sequence, Methods Online, Sequence Alignment, Transcription Factors
وصف الملف: application/pdf
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::699ee3cd33c4b490d714d7f8c49aa43aTest
https://research.vu.nl/en/publications/3ecbec51-2848-4014-95dc-747f47fb8052Test -
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المؤلفون: Patrick Midoux, Thomas Thibault, Patrick Baril, Jéril Degrouard, Jean-Marc Malinge, Chantal Pichon
المساهمون: Centre de biophysique moléculaire (CBM), Université d'Orléans (UO)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC), Laboratoire de Physique des Solides (LPS), Université Paris-Sud - Paris 11 (UP11)-Centre National de la Recherche Scientifique (CNRS)
المصدر: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2017, 45 (5), pp.e26-e26. ⟨10.1093/nar/gkw1034⟩مصطلحات موضوعية: 0301 basic medicine, Saccharomyces cerevisiae Proteins, Transcription, Genetic, Base pair, [SDV]Life Sciences [q-bio], Biology, Minicircle, Substrate Specificity, Ligases, 03 medical and health sciences, chemistry.chemical_compound, Transcription (biology), Genetics, Escherichia coli, Humans, Transcription factor, Base Pairing, 030102 biochemistry & molecular biology, Base Sequence, Oligonucleotide, NF-kappa B, Molecular biology, Recombinant Proteins, DNA-Binding Proteins, 030104 developmental biology, HEK293 Cells, Biochemistry, chemistry, Oligodeoxyribonucleotides, Nucleic acid, DNA supercoil, Methods Online, DNA, Circular, DNA, Transcription Factors
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f56f18be440d2e4bc0ae62d283e9123bTest
https://pubmed.ncbi.nlm.nih.gov/27899652Test
