التفاصيل البيبلوغرافية
| العنوان: |
Automatic correspondence of tags and genes (ACTG): a tool for the analysis of SAGE, MPSS and SBS data. |
| المؤلفون: |
Pedro A. F. Galante, Jeff Trimarchi, Constance L. Cepko, Sandro J. de Souza, Lucila Ohno-Machado, Winston P. Kuo |
| المصدر: |
Bioinformatics; Apr2007, Vol. 23 Issue 7, p903-905, 3p |
| مصطلحات موضوعية: |
HEREDITY, SALVIA, GENE mapping, BIOINFORMATICS |
| مستخلص: |
Summary: A critical step in any SAGE, MPSS and SBS data analysis is tag-to-gene assignment. Current available tools are limited by a tag-by-tag annotation process and/or do not provide the dataset that is used to produce a complete tag-to-gene mapping. We developed ACTG, a web-based application that allows a large-scale tag-to-gene mapping using several reference datasets. ACTG can annotate SAGE (14 or 21 bp), MPSS (17 or 20 bp) and SBS (16 bp) data for both human and mouse organisms.Availability:http://retina.med.harvard.edu/ACTG/Contact:pgalante@ludwig.org.brSupplementaryTest information: Supplementary data are available at Bioinformatics online. [ABSTRACT FROM AUTHOR] |
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| قاعدة البيانات: |
Complementary Index |
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