نتائج البحث - "Pond, Sergei"

1

دورية أكاديمية

Evolutionary Shortcuts via Multinucleotide Substitutions and Their Impact on Natural Selection Analyses.

المؤلفون: Lucaci, Alexander G, Zehr, Jordan D, Enard, David, Thornton, Joseph W, Pond, Sergei L Kosakovsky

المصدر: Molecular Biology & Evolution; Jul2023, Vol. 40 Issue 7, p1-20, 20p

مصطلحات موضوعية: NATURAL selection, SOFTWARE frameworks, GENOMICS, SOFTWARE development tools, STATISTICAL power analysis, EVOLUTIONARY algorithms

النص الكامل

2

دورية أكاديمية

Identification of Evolutionary Trajectories Shared across Human Betacoronaviruses.

المؤلفون: Escalera-Zamudio, Marina^1,2 (AUTHOR) marina.escalerazamudio@biology.ox.ac.uk, Pond, Sergei L Kosakovsky³ (AUTHOR), Viña, Natalia Martínez de la¹ (AUTHOR), Gutiérrez, Bernardo^1,2 (AUTHOR), Inward, Rhys P D¹ (AUTHOR), Thézé, Julien⁴ (AUTHOR), Dorp, Lucy van⁵ (AUTHOR), Castelán-Sánchez, Hugo G^2,6 (AUTHOR), Bowden, Thomas A⁷ (AUTHOR), Pybus, Oliver G^1,8 (AUTHOR), Hulswit, Ruben J G⁷ (AUTHOR) marina.escalerazamudio@biology.ox.ac.uk

المصدر: Genome Biology & Evolution. Jun2023, Vol. 15 Issue 6, p1-16. 16p.

مصطلحات موضوعية: *MOLECULAR evolution, *SARS virus, *PROTEIN structure, *ECOLOGICAL niche, *BETACORONAVIRUS, *AVIAN influenza

النص الكامل

3

دورية أكاديمية

Natural selection differences detected in key protein domains between non-pathogenic and pathogenic feline coronavirus phenotypes.

المؤلفون: Zehr, Jordan D, Kosakovsky Pond, Sergei L, Millet, Jean K, Olarte-Castillo, Ximena A, Lucaci, Alexander G, Shank, Stephen D, Ceres, Kristina M, Choi, Annette, Whittaker, Gary R, Goodman, Laura B, Stanhope, Michael J

المصدر: Virus Evolution; 2023, Vol. 9 Issue 1, p1-16, 16p

مصطلحات موضوعية: NATURAL selection, CORONAVIRUSES, PROTEIN domains, COVID-19, GENETIC techniques

النص الكامل

4

دورية أكاديمية

Conserved recombination patterns across coronavirus subgenera.

المؤلفون: Klerk, Arné de, Swanepoel, Phillip, Lourens, Rentia, Zondo, Mpumelelo, Abodunran, Isaac, Lytras, Spyros, MacLean, Oscar A, Robertson, David, Pond, Sergei L Kosakovsky, Zehr, Jordan D, Kumar, Venkatesh, Stanhope, Michael J, Harkins, Gordon, Murrell, Ben, Martin, Darren P

المصدر: Virus Evolution; 2022, Vol. 8 Issue 2, p1-15, 15p

مصطلحات موضوعية: CORONAVIRUSES, COVID-19, GENETIC recombination, NUCLEOTIDE sequence, PROTEIN folding, PHYSIOLOGICAL effects of cold temperatures, MOLECULAR evolution

النص الكامل

5

دورية أكاديمية

TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity.

المؤلفون: Caraballo-Ortiz, Marcos A, Miura, Sayaka, Sanderford, Maxwell, Dolker, Tenzin, Tao, Qiqing, Weaver, Steven, Pond, Sergei L K, Kumar, Sudhir

المصدر: Bioinformatics; May2022, Vol. 38 Issue 10, p2719-2726, 8p

مصطلحات موضوعية: HAPLOTYPES, COVID-19, SARS-CoV-2

النص الكامل

6

دورية أكاديمية

Exploring the Natural Origins of SARS-CoV-2 in the Light of Recombination.

المؤلفون: Lytras, Spyros, Hughes, Joseph, Martin, Darren, Swanepoel, Phillip, Klerk, Arné de, Lourens, Rentia, Pond, Sergei L Kosakovsky, Xia, Wei, Jiang, Xiaowei, Robertson, David L

المصدر: Genome Biology & Evolution; Feb2022, Vol. 14 Issue 2, p1-14, 14p

مصطلحات موضوعية: SARS-CoV-2, BATS, HORSESHOE bats, HUMORAL immunity, CORONAVIRUSES, ANIMAL species

مصطلحات جغرافية: SOUTHEAST Asia, YUNNAN Sheng (China), WUHAN (China)

النص الكامل

7

دورية أكاديمية

Stepwise Evolution and Exceptional Conservation of ORF1a/b Overlap in Coronaviruses.

المؤلفون: Mei, Han, Pond, Sergei Kosakovsky, Nekrutenko, Anton

المصدر: Molecular Biology & Evolution; Dec2021, Vol. 38 Issue 12, p5678-5684, 7p

مصطلحات موضوعية: SARS-CoV-2, PHYLOGENY, COMPARATIVE studies, GENE expression, NUCLEOTIDES

النص الكامل

8

دورية أكاديمية

Effective Human Immunodeficiency Virus Molecular Surveillance Requires Identification of Incident Cases of Infection.

المؤلفون: Little, Susan J, Chen, Tom, Wang, Rui, Anderson, Christy, Pond, Sergei Kosakovsky, Nakazawa, Masato, Mathews, William C, DeGruttola, Victor, Smith, Davey M

المصدر: Clinical Infectious Diseases; 9/1/2021, Vol. 73 Issue 5, p842-849, 8p

مصطلحات موضوعية: HIV infection epidemiology, HIV infection transmission, HIV prevention, PUBLIC health surveillance, PHYLOGENY, CONFIDENCE intervals, DESCRIPTIVE statistics, PROPORTIONAL hazards models

الشركة/الكيان: CENTERS for Disease Control & Prevention (U.S.)

9

دورية أكاديمية

An Evolutionary Portrait of the Progenitor SARS-CoV-2 and Its Dominant Offshoots in COVID-19 Pandemic.

المؤلفون: Kumar, Sudhir, Tao, Qiqing, Weaver, Steven, Sanderford, Maxwell, Caraballo-Ortiz, Marcos A, Sharma, Sudip, Pond, Sergei L K, Miura, Sayaka

المصدر: Molecular Biology & Evolution; Aug2021, Vol. 38 Issue 8, p3046-3059, 14p

مصطلحات موضوعية: SARS-CoV-2, CORONAVIRUSES, GENETIC variation, GENETIC mutation, PROGENITOR cells

النص الكامل

10

دورية أكاديمية

Contrast-FEL—A Test for Differences in Selective Pressures at Individual Sites among Clades and Sets of Branches.

المؤلفون: Pond, Sergei L Kosakovsky, Wisotsky, Sadie R, Escalante, Ananias, Magalis, Brittany Rife, Weaver, Steven

المصدر: Molecular Biology & Evolution; Mar2021, Vol. 38 Issue 3, p1184-1198, 15p

مصطلحات موضوعية: BIOLOGICAL evolution, PHYLOGENETIC models, BIOLOGICAL models, PHYLOGENY, SIMULATION methods & models

النص الكامل

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