دورية أكاديمية
jClust: a clustering and visualization toolbox
| العنوان: | jClust: a clustering and visualization toolbox |
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| المؤلفون: | Pavlopoulos, Georgios A., Moschopoulos, Charalampos N., Hooper, Sean D., Schneider, Reinhard, Kossida, Sophia |
| بيانات النشر: | Oxford University Press |
| سنة النشر: | 2009 |
| المجموعة: | HighWire Press (Stanford University) |
| مصطلحات موضوعية: | SYSTEMS BIOLOGY |
| الوصف: | jClust is a user-friendly application which provides access to a set of widely used clustering and clique finding algorithms. The toolbox allows a range of filtering procedures to be applied and is combined with an advanced implementation of the Medusa interactive visualization module. These implemented algorithms are k -Means, Affinity propagation, Bron–Kerbosch, MULIC, Restricted neighborhood search cluster algorithm, Markov clustering and Spectral clustering, while the supported filtering procedures are haircut, outside–inside, best neighbors and density control operations. The combination of a simple input file format, a set of clustering and filtering algorithms linked together with the visualization tool provides a powerful tool for data analysis and information extraction. Availability: http://jclust.embl.deTest/ Contact: pavlopou@embl.de ; rschneid@embl.de ; skossida@bioacademy.gr Supplementary information: Supplementary data are available at Bioinformatics online. |
| نوع الوثيقة: | text |
| وصف الملف: | text/html |
| اللغة: | English |
| العلاقة: | http://bioinformatics.oxfordjournals.org/cgi/content/short/25/15/1994Test; http://dx.doi.org/10.1093/bioinformatics/btp330Test |
| DOI: | 10.1093/bioinformatics/btp330 |
| الإتاحة: | https://doi.org/10.1093/bioinformatics/btp330Test http://bioinformatics.oxfordjournals.org/cgi/content/short/25/15/1994Test |
| حقوق: | Copyright (C) 2009, Oxford University Press |
| رقم الانضمام: | edsbas.F6CB5105 |
| قاعدة البيانات: | BASE |
| DOI: | 10.1093/bioinformatics/btp330 |
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