دورية أكاديمية
Testing population genetic structure using parametric bootstrapping and M IGRATE-N
| العنوان: | Testing population genetic structure using parametric bootstrapping and M IGRATE-N |
|---|---|
| المؤلفون: | Carstens, Bryan C., Bankhead, A., Joyce, P., Sullivan, J. |
| المساهمون: | Department of Biological Sciences, University of Idaho, USA, Department of Ecology & Evolutionary Biology, University of Michigan, , 1109 Geddes Ave., Museum of Zoology, Room 1089, , Ann Arbor, 48109-1079, MI, USA, Initiative in Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, USA, Department of Computer Science, University of Idaho, USA, Department of Mathematics, University of Idaho, USA, Ann Arbor |
| بيانات النشر: | Kluwer Academic Publishers; Springer |
| سنة النشر: | 2005 |
| المجموعة: | University of Michigan: Deep Blue |
| مصطلحات موضوعية: | Life Sciences, Human Genetics, Microbial Genetics and Genomics, Plant Genetics & Genomics, Animal Genetics and Genomics, Migration, M IGRATE-N, Panmixia, Parametric Bootstrapping, Population Structure, Natural Resources and Environment, Molecular, Cellular and Developmental Biology, Ecology and Evolutionary Biology, Health Sciences, Science |
| الوصف: | We present a method for investigating genetic population structure using sequence data. Our hypothesis states that the parameters most responsible for the formation of genetic structure among different populations are the relative rates of mutation (μ) and migration (M). The evolution of genetic structure among different populations requires rates of M ≪ μ because this allows population-specific mutation to accumulate. Rates of μ ≪ M will result in populations that are effectively panmictic because genetic differentiation will not develop among demes. Our test is implemented by using a parametric bootstrap to create the null distribution of the likelihood of the data having been produced under an appropriate model of sequence evolution and a migration rate sufficient to approximate panmixia. We describe this test, then apply it to mtDNA data from 243 plethodontid salamanders. We are able to reject the null hypothesis of no population structure on all but smallest geographic scales, a result consistent with the apparent lack of migration in Plethodon idahoensis . This approach represents a new method of investigating population structure with haploid DNA, and as such may be particularly useful for preliminary investigation of non-model organisms in which multi-locus nuclear data are not available. ; Peer Reviewed ; http://deepblue.lib.umich.edu/bitstream/2027.42/42796/1/10709_2004_Article_8358.pdfTest |
| نوع الوثيقة: | article in journal/newspaper |
| وصف الملف: | 237013 bytes; 3115 bytes; application/pdf; text/plain |
| اللغة: | English |
| تدمد: | 0016-6707 1573-6857 |
| العلاقة: | Carstens, B. C.; Bankhead, A.; Joyce, P.; Sullivan, J.; (2005). "Testing population genetic structure using parametric bootstrapping and M IGRATE-N ." Genetica 124(1): 71-75.; https://hdl.handle.net/2027.42/42796Test; http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=retrieve&db=pubmed&list_uids=16011004&dopt=citationTest; http://dx.doi.org/10.1007/s10709-004-8358-1Test; Genetica |
| DOI: | 10.1007/s10709-004-8358-1 |
| الإتاحة: | https://doi.org/10.1007/s10709-004-8358-1Test https://hdl.handle.net/2027.42/42796Test http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=retrieve&db=pubmed&list_uids=16011004&dopt=citationTest |
| رقم الانضمام: | edsbas.BF289F62 |
| قاعدة البيانات: | BASE |
| تدمد: | 00166707 15736857 |
|---|---|
| DOI: | 10.1007/s10709-004-8358-1 |