Gene expression profiles for an immunoscore model in bone and soft tissue sarcoma

التفاصيل البيبلوغرافية
العنوان: Gene expression profiles for an immunoscore model in bone and soft tissue sarcoma
المؤلفون: Rong-Quan He, Xinyi Qin, Qing-jun Wei, Jingyuan Fan, Jie Ma
المصدر: Aging (Albany NY)
بيانات النشر: Impact Journals, 2021.
سنة النشر: 2021
مصطلحات موضوعية: Oncology, Adult, Male, Aging, medicine.medical_specialty, immune infiltrating, sarcoma, Time Factors, Adolescent, Bone Neoplasms, Kaplan-Meier Estimate, Immune system, Internal medicine, medicine, Humans, Neoplasm Metastasis, K-means, Survival analysis, Proportional hazards model, business.industry, Soft tissue sarcoma, lasso regression, Gene Expression Profiling, Soft tissue, CIBERSORT, Cell Biology, Nomogram, medicine.disease, Gene Expression Regulation, Neoplastic, Nomograms, Drug Resistance, Neoplasm, Osteosarcoma, Regression Analysis, Female, Sarcoma, business, Research Paper
الوصف: Background: Immune infiltration is a prognostic marker to clinical outcomes in various solid tumors. However, reports that focus on bone and soft tissue sarcoma are rare. The study aimed to analyze and identify how immune components influence prognosis and develop a novel prognostic system for sarcomas. Methods: We retrieved the gene expression data from 3 online databases (GEO, TCGA, and TARGET). The immune fraction was estimated using the CIBERSORT algorithm. After that, we re-clustered samples by K-means and constructed immunoscore by the least absolute shrinkage and selection operator (LASSO) Cox regression model. Next, to confirm the prognostic value, nomograms were constructed. Results: 334 samples diagnosed with 8 tumor types (including osteosarcoma) were involved in our analysis. Patients were next re-clustered into three subgroups (OS, SAR1, and SAR2) through immune composition. Survival analysis showed a significant difference between the two soft tissue groups: patients with a higher proportion of CD8+ T cells, macrophages M1, and mast cells had favorable outcomes (p=0.0018). Immunoscore models were successfully established in OS and SAR2 groups consisting of 12 and 9 cell fractions, respectively. We found immunosocre was an independent factor for overall survival time. Patients with higher immunoscore had poor prognosis (p
اللغة: English
تدمد: 1945-4589
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bdec518c90abdecbcdecdd0158b89261Test
http://europepmc.org/articles/PMC8202872Test
حقوق: OPEN
رقم الانضمام: edsair.doi.dedup.....bdec518c90abdecbcdecdd0158b89261
قاعدة البيانات: OpenAIRE